| Definition | Candidatus Solibacter usitatus Ellin6076 chromosome, complete genome. |
|---|---|
| Accession | NC_008536 |
| Length | 9,965,640 |
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The map label for this gene is aceE [H]
Identifier: 116624469
GI number: 116624469
Start: 6753272
End: 6755959
Strand: Reverse
Name: aceE [H]
Synonym: Acid_5391
Alternate gene names: 116624469
Gene position: 6755959-6753272 (Counterclockwise)
Preceding gene: 116624471
Following gene: 116624468
Centisome position: 67.79
GC content: 62.8
Gene sequence:
>2688_bases ATGAGATTATCCATGCACCAGAAACTTAATGAGAGGGTTGTAGACCTCAATCCGCAGGAAACCTCCGAGTGGATTGAGTC CCTGGACCAGGTAATCGACGAAGCGGGTCCGGATCGCGCCACATTCCTGCTGGAGCACCTTACCGAGCGTGCCCGCGCCA CTGGCGTGGAGCTGCCGGTCCAGCTGAATACACCATACATCAACACGATCCGTCCGGAAGATGAAGTGCCCTATCCCGGC GACCGTGCTATGGAGCGCCGCATCAAGAGCCTGATCCGTTGGAACGCCATGGCGATGGTGGTGAGGCAGAACAAGTACGA CGCTGGAATCGGCGGACACATCTCCACCTACGCGTCACTCGCCACGCTCCTTGAGGTCGGCTTCAACCATTTCTTCCACG CCAGCTACGGCGATCAGCCCGGCGACCTGGTTTACTTCCAGGGCCACGCCTCTCCCGGCGTTTATGGGCGCGCCTTCCTG GAAGGGCGCATCACCGAAGAGCACCTCAAGAACTTCCGCCACGAGCTGCGCGACACACCGGGCCTTTCCTCGTATCCGCA CCCGTGGCTGATGCCCGATTTCTGGAGCTTCCCGACGGTCAGCATGGGGCTGGGCCCGATCAACGCGATCTATCAGGCGC GCTTCATGCGGTACCTGGAGAACCGCGGGATCATTCCGGAGACGCCGCGGCAGGTATGGGCGTACCTGGGCGATGGCGAA ATGGACGAGCCGGAATCGATGGGGTCGATTACGCTGGCCTCGCGCGAAAAGCTCGACAACCTGAAGTTCGTGATCAACTG CAACCTGCAGCGCCTCGATGGTCCGGTGCGCGGCAACGGCAAGGTGATCCAGGAGCTGGAAGCGGCCTTCCGCGGCGCGG GCTGGAACGTCATCAAGGTGATCTGGGGCTCCGACTGGGATCCGCTTCTGGCGCGCGATACTACGGGCCTGCTGCAGCGC CGCATGGGCGAAGTGGTGGACGGCGAATTCCAGACGTACGTCACCAAAGACGGCGCGTACATCCGGCAGTACTTCTTCGG CAAGTACCCCGAGCTGTTGGACCTGGTATCGCACCTGAGCGACGAGGAAGTCTTCAAGCTGCGGCGCGGCGGGCACGACC CGCGCAAAGTCTACAACGCCTACAAGCAGGCGGTCGAAACCAAGGGCAAGCCGACGCTGATTCTGGCGCACTCCGTAAAG GGCTACGGCCTCGGCGAATCGGGCGAGGGGCGCAACATCTCGCACCAGCAGAAGAAGCTGAACGAGCAGGAGATCGCCAA CTTCCGGTCGCGGTTTGAAATCCCCATCCCCGATGAAGCCGCGCGCAACGCGTCGTTCTACCGGCCTCCTTCGGATAGCC CGGAAATGAGCTACCTGCACGAGCGCCGCCGGGTGCTGGGCGGGTACATGCCCAGCCGCAAGGTGCCGGAGAGCAAGATC ACGGCGCCGCCGCTCGAATACCTGAAGGAATCGCTGGAAGGCTCGGGAGAGCGCGAAGTATCGAGCACGATGGCGATGGT GCGCGTGCTGACGCTGCTCTTGAAGCATCCGGAAATCGGCAAGCGCGTGGTGCCGATCATCCCCGACGAAGCGCGCACGT TCGGCATGGAATCGCTGTTCCGGCAGTTCGGCATTTACGCGAGCCAGGGACAGCTCTACAAGCCTCACGACGCGGAGATC TTCCTCTACTACAAGGAATCGCGCGACGGCCAGATTCTGGAAGAGGGCATTACGGAGGCGGGAAGCATTTCGAGCTTCAC CGCGGCCGGCACGGCATATGCGAACTACGGCGTGGAGATGATCCCGTTCTTCATCTACTACTCGATGTTCGGTTTCCAGC GCGTGGGCGACTCCATCTGGGCGTTCGGCGACGCGCGCGGCAAGGGCTTCCTTTGCGGAGGCACGGCGGGCCGCACCACG CTCTCGGGCGAGGGACTGCAGCACCAGGACGGCCACAGCATCCTGCATGCGAGCACGGTGCCGAACTGCAAGACTTACGA TCCGGCGTTCGCCTATGAGATCGCGATCATCGTGCAGGACGGCATTCGCGTGATGTACCAGGAGAAGCAGGATTGCTTCT ACTACCTCACGCTGTACAACGAGAACTACCCGATGCCGGCGATGCCCGCGGGGCTCGACCCCGAGGGCGTGCTGAAAGGC ATCTACCGCTTCAAGGCTCCGGAAAAGGGCAAGGCCAAGGTGCACCTGTTCGGCAGCGGCCCGATCTTGAACGAAGCGCT GCGCGCCCAGCAGATTCTGGCGGAGAAATACAACGTGCCGTCGGACGTATGGAGCGTGACCAGCTACAACGAACTGCGGC GCGATGCGCTGGCGGTGGAACGCTGGAACCGCCTGCATCCCGATCAACCGCAGCGCGTGCCCTATCTGTTGCAGGCGATG AAGGGCGCGGATGCCCCGGTGATTGCGGCCAGCGACTACATGAAGGTAGTAGCGGACCAGATTGCGCCGTGGCTGCCGGG ACGCATGGAAACGCTGGGCACGGATGGCTTCGGGCGCAGCGACAACCGCGAGTACCTGCGGCGGCATTTCGAGATCAACG CCGAATCGATCGCGGCGGCGGCGCTTTCGCGGCTGGCGCGCGACGGAAAGTTCGACGCGAAGAAGGCGGTGGCCGCCTTC AAAGATCTCGGCGTGGACACCGAGAAGATCGACGCCGCCCGCGCCTGA
Upstream 100 bases:
>100_bases CTATACGATAGCCAGCAGAGCTCGCAGGTTTCAAGTCACCCACTATAGCCACATTGTACCTGTAAGGCCCCGGAGCGTAG GCGAAGGTTCCCTGGCTATA
Downstream 100 bases:
>100_bases CGGCGCGGCGGGAACCTCATGCAAATCGGTCAACGTGTCGCGGTCGCCGGGATGCTGGTCTCGGGCGCGTTGGCCCTGAT CAAGATCTTCGCCGGGCTGG
Product: pyruvate dehydrogenase subunit E1
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 895; Mature: 895
Protein sequence:
>895_residues MRLSMHQKLNERVVDLNPQETSEWIESLDQVIDEAGPDRATFLLEHLTERARATGVELPVQLNTPYINTIRPEDEVPYPG DRAMERRIKSLIRWNAMAMVVRQNKYDAGIGGHISTYASLATLLEVGFNHFFHASYGDQPGDLVYFQGHASPGVYGRAFL EGRITEEHLKNFRHELRDTPGLSSYPHPWLMPDFWSFPTVSMGLGPINAIYQARFMRYLENRGIIPETPRQVWAYLGDGE MDEPESMGSITLASREKLDNLKFVINCNLQRLDGPVRGNGKVIQELEAAFRGAGWNVIKVIWGSDWDPLLARDTTGLLQR RMGEVVDGEFQTYVTKDGAYIRQYFFGKYPELLDLVSHLSDEEVFKLRRGGHDPRKVYNAYKQAVETKGKPTLILAHSVK GYGLGESGEGRNISHQQKKLNEQEIANFRSRFEIPIPDEAARNASFYRPPSDSPEMSYLHERRRVLGGYMPSRKVPESKI TAPPLEYLKESLEGSGEREVSSTMAMVRVLTLLLKHPEIGKRVVPIIPDEARTFGMESLFRQFGIYASQGQLYKPHDAEI FLYYKESRDGQILEEGITEAGSISSFTAAGTAYANYGVEMIPFFIYYSMFGFQRVGDSIWAFGDARGKGFLCGGTAGRTT LSGEGLQHQDGHSILHASTVPNCKTYDPAFAYEIAIIVQDGIRVMYQEKQDCFYYLTLYNENYPMPAMPAGLDPEGVLKG IYRFKAPEKGKAKVHLFGSGPILNEALRAQQILAEKYNVPSDVWSVTSYNELRRDALAVERWNRLHPDQPQRVPYLLQAM KGADAPVIAASDYMKVVADQIAPWLPGRMETLGTDGFGRSDNREYLRRHFEINAESIAAAALSRLARDGKFDAKKAVAAF KDLGVDTEKIDAARA
Sequences:
>Translated_895_residues MRLSMHQKLNERVVDLNPQETSEWIESLDQVIDEAGPDRATFLLEHLTERARATGVELPVQLNTPYINTIRPEDEVPYPG DRAMERRIKSLIRWNAMAMVVRQNKYDAGIGGHISTYASLATLLEVGFNHFFHASYGDQPGDLVYFQGHASPGVYGRAFL EGRITEEHLKNFRHELRDTPGLSSYPHPWLMPDFWSFPTVSMGLGPINAIYQARFMRYLENRGIIPETPRQVWAYLGDGE MDEPESMGSITLASREKLDNLKFVINCNLQRLDGPVRGNGKVIQELEAAFRGAGWNVIKVIWGSDWDPLLARDTTGLLQR RMGEVVDGEFQTYVTKDGAYIRQYFFGKYPELLDLVSHLSDEEVFKLRRGGHDPRKVYNAYKQAVETKGKPTLILAHSVK GYGLGESGEGRNISHQQKKLNEQEIANFRSRFEIPIPDEAARNASFYRPPSDSPEMSYLHERRRVLGGYMPSRKVPESKI TAPPLEYLKESLEGSGEREVSSTMAMVRVLTLLLKHPEIGKRVVPIIPDEARTFGMESLFRQFGIYASQGQLYKPHDAEI FLYYKESRDGQILEEGITEAGSISSFTAAGTAYANYGVEMIPFFIYYSMFGFQRVGDSIWAFGDARGKGFLCGGTAGRTT LSGEGLQHQDGHSILHASTVPNCKTYDPAFAYEIAIIVQDGIRVMYQEKQDCFYYLTLYNENYPMPAMPAGLDPEGVLKG IYRFKAPEKGKAKVHLFGSGPILNEALRAQQILAEKYNVPSDVWSVTSYNELRRDALAVERWNRLHPDQPQRVPYLLQAM KGADAPVIAASDYMKVVADQIAPWLPGRMETLGTDGFGRSDNREYLRRHFEINAESIAAAALSRLARDGKFDAKKAVAAF KDLGVDTEKIDAARA >Mature_895_residues MRLSMHQKLNERVVDLNPQETSEWIESLDQVIDEAGPDRATFLLEHLTERARATGVELPVQLNTPYINTIRPEDEVPYPG DRAMERRIKSLIRWNAMAMVVRQNKYDAGIGGHISTYASLATLLEVGFNHFFHASYGDQPGDLVYFQGHASPGVYGRAFL EGRITEEHLKNFRHELRDTPGLSSYPHPWLMPDFWSFPTVSMGLGPINAIYQARFMRYLENRGIIPETPRQVWAYLGDGE MDEPESMGSITLASREKLDNLKFVINCNLQRLDGPVRGNGKVIQELEAAFRGAGWNVIKVIWGSDWDPLLARDTTGLLQR RMGEVVDGEFQTYVTKDGAYIRQYFFGKYPELLDLVSHLSDEEVFKLRRGGHDPRKVYNAYKQAVETKGKPTLILAHSVK GYGLGESGEGRNISHQQKKLNEQEIANFRSRFEIPIPDEAARNASFYRPPSDSPEMSYLHERRRVLGGYMPSRKVPESKI TAPPLEYLKESLEGSGEREVSSTMAMVRVLTLLLKHPEIGKRVVPIIPDEARTFGMESLFRQFGIYASQGQLYKPHDAEI FLYYKESRDGQILEEGITEAGSISSFTAAGTAYANYGVEMIPFFIYYSMFGFQRVGDSIWAFGDARGKGFLCGGTAGRTT LSGEGLQHQDGHSILHASTVPNCKTYDPAFAYEIAIIVQDGIRVMYQEKQDCFYYLTLYNENYPMPAMPAGLDPEGVLKG IYRFKAPEKGKAKVHLFGSGPILNEALRAQQILAEKYNVPSDVWSVTSYNELRRDALAVERWNRLHPDQPQRVPYLLQAM KGADAPVIAASDYMKVVADQIAPWLPGRMETLGTDGFGRSDNREYLRRHFEINAESIAAAALSRLARDGKFDAKKAVAAF KDLGVDTEKIDAARA
Specific function: The pyruvate dehydrogenase complex catalyzes the overall conversion of pyruvate to acetyl-CoA and CO(2). It contains multiple copies of three enzymatic components:pyruvate dehydrogenase (E1), dihydrolipoamide acetyltransferase (E2) and lipoamide dehydroge
COG id: COG2609
COG function: function code C; Pyruvate dehydrogenase complex, dehydrogenase (E1) component
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Escherichia coli, GI1786304, Length=881, Percent_Identity=54.5970488081725, Blast_Score=994, Evalue=0.0,
Paralogues:
None
Copy number: 1140 Molecules/Cell In: Growth-Phase, Minimal-Media (Based on E. coli). 400 Molecules/Cell In: Stationary Phase, Rich Media (Based on E. coli). 6,000 Molecules/Cell In: Glucose minimal media [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004660 - InterPro: IPR009014 - InterPro: IPR015941 - InterPro: IPR005474 [H]
Pfam domain/function: PF00456 Transketolase_N [H]
EC number: =1.2.4.1 [H]
Molecular weight: Translated: 100846; Mature: 100846
Theoretical pI: Translated: 6.52; Mature: 6.52
Prosite motif: PS00012 PHOSPHOPANTETHEINE ; PS00165 DEHYDRATASE_SER_THR
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRLSMHQKLNERVVDLNPQETSEWIESLDQVIDEAGPDRATFLLEHLTERARATGVELPV CCCCHHHHHHCCEECCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCEEE QLNTPYINTIRPEDEVPYPGDRAMERRIKSLIRWNAMAMVVRQNKYDAGIGGHISTYASL EECCCEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHEEEECCCCCCCCCCHHHHHHHH ATLLEVGFNHFFHASYGDQPGDLVYFQGHASPGVYGRAFLEGRITEEHLKNFRHELRDTP HHHHHHHHHHEEECCCCCCCCCEEEEECCCCCCCCHHHHHHCCCCHHHHHHHHHHHCCCC GLSSYPHPWLMPDFWSFPTVSMGLGPINAIYQARFMRYLENRGIIPETPRQVWAYLGDGE CCCCCCCCCCCCCCCCCCCHHCCCCHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHCCCCC MDEPESMGSITLASREKLDNLKFVINCNLQRLDGPVRGNGKVIQELEAAFRGAGWNVIKV CCCCHHCCCEEEHHHHCCCCEEEEEECCHHHCCCCCCCCCHHHHHHHHHHCCCCCEEEEE IWGSDWDPLLARDTTGLLQRRMGEVVDGEFQTYVTKDGAYIRQYFFGKYPELLDLVSHLS EECCCCCCHHHCCHHHHHHHHHHHHHCCCCEEEEECCCHHHHHHHHCCCHHHHHHHHHCC DEEVFKLRRGGHDPRKVYNAYKQAVETKGKPTLILAHSVKGYGLGESGEGRNISHQQKKL HHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCCCCCCCCCHHHHHC NEQEIANFRSRFEIPIPDEAARNASFYRPPSDSPEMSYLHERRRVLGGYMPSRKVPESKI CHHHHHHHHHHCCCCCCCHHHCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCC TAPPLEYLKESLEGSGEREVSSTMAMVRVLTLLLKHPEIGKRVVPIIPDEARTFGMESLF CCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCCCCCEEECCCCCHHHHHHHHHHH RQFGIYASQGQLYKPHDAEIFLYYKESRDGQILEEGITEAGSISSFTAAGTAYANYGVEM HHHCCEECCCCEECCCCCEEEEEEECCCCCHHHHHHCCCCCCCCCHHHCCCHHHHCCHHH IPFFIYYSMFGFQRVGDSIWAFGDARGKGFLCGGTAGRTTLSGEGLQHQDGHSILHASTV HHHHHHHHHHHHHHHCCHHEEECCCCCCEEEECCCCCCCEECCCCCCCCCCCCEEEECCC PNCKTYDPAFAYEIAIIVQDGIRVMYQEKQDCFYYLTLYNENYPMPAMPAGLDPEGVLKG CCCCCCCCHHHEEEEEEECCCHHHHHHCCCCEEEEEEEECCCCCCCCCCCCCCHHHHHHH IYRFKAPEKGKAKVHLFGSGPILNEALRAQQILAEKYNVPSDVWSVTSYNELRRDALAVE HHHHCCCCCCCCEEEEEECCCHHHHHHHHHHHHHHHCCCCHHHHHHCCHHHHHHHHHHHH RWNRLHPDQPQRVPYLLQAMKGADAPVIAASDYMKVVADQIAPWLPGRMETLGTDGFGRS HHHCCCCCCCCHHHHHHHHHCCCCCCEEEHHHHHHHHHHHHCCCCCCHHHHCCCCCCCCC DNREYLRRHFEINAESIAAAALSRLARDGKFDAKKAVAAFKDLGVDTEKIDAARA CCHHHHHHHHCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCHHHHHCCCC >Mature Secondary Structure MRLSMHQKLNERVVDLNPQETSEWIESLDQVIDEAGPDRATFLLEHLTERARATGVELPV CCCCHHHHHHCCEECCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCEEE QLNTPYINTIRPEDEVPYPGDRAMERRIKSLIRWNAMAMVVRQNKYDAGIGGHISTYASL EECCCEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHEEEECCCCCCCCCCHHHHHHHH ATLLEVGFNHFFHASYGDQPGDLVYFQGHASPGVYGRAFLEGRITEEHLKNFRHELRDTP HHHHHHHHHHEEECCCCCCCCCEEEEECCCCCCCCHHHHHHCCCCHHHHHHHHHHHCCCC GLSSYPHPWLMPDFWSFPTVSMGLGPINAIYQARFMRYLENRGIIPETPRQVWAYLGDGE CCCCCCCCCCCCCCCCCCCHHCCCCHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHCCCCC MDEPESMGSITLASREKLDNLKFVINCNLQRLDGPVRGNGKVIQELEAAFRGAGWNVIKV CCCCHHCCCEEEHHHHCCCCEEEEEECCHHHCCCCCCCCCHHHHHHHHHHCCCCCEEEEE IWGSDWDPLLARDTTGLLQRRMGEVVDGEFQTYVTKDGAYIRQYFFGKYPELLDLVSHLS EECCCCCCHHHCCHHHHHHHHHHHHHCCCCEEEEECCCHHHHHHHHCCCHHHHHHHHHCC DEEVFKLRRGGHDPRKVYNAYKQAVETKGKPTLILAHSVKGYGLGESGEGRNISHQQKKL HHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCCCCCCCCCHHHHHC NEQEIANFRSRFEIPIPDEAARNASFYRPPSDSPEMSYLHERRRVLGGYMPSRKVPESKI CHHHHHHHHHHCCCCCCCHHHCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCC TAPPLEYLKESLEGSGEREVSSTMAMVRVLTLLLKHPEIGKRVVPIIPDEARTFGMESLF CCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCCCCCEEECCCCCHHHHHHHHHHH RQFGIYASQGQLYKPHDAEIFLYYKESRDGQILEEGITEAGSISSFTAAGTAYANYGVEM HHHCCEECCCCEECCCCCEEEEEEECCCCCHHHHHHCCCCCCCCCHHHCCCHHHHCCHHH IPFFIYYSMFGFQRVGDSIWAFGDARGKGFLCGGTAGRTTLSGEGLQHQDGHSILHASTV HHHHHHHHHHHHHHHCCHHEEECCCCCCEEEECCCCCCCEECCCCCCCCCCCCEEEECCC PNCKTYDPAFAYEIAIIVQDGIRVMYQEKQDCFYYLTLYNENYPMPAMPAGLDPEGVLKG CCCCCCCCHHHEEEEEEECCCHHHHHHCCCCEEEEEEEECCCCCCCCCCCCCCHHHHHHH IYRFKAPEKGKAKVHLFGSGPILNEALRAQQILAEKYNVPSDVWSVTSYNELRRDALAVE HHHHCCCCCCCCEEEEEECCCHHHHHHHHHHHHHHHCCCCHHHHHHCCHHHHHHHHHHHH RWNRLHPDQPQRVPYLLQAMKGADAPVIAASDYMKVVADQIAPWLPGRMETLGTDGFGRS HHHCCCCCCCCHHHHHHHHHCCCCCCEEEHHHHHHHHHHHHCCCCCCHHHHCCCCCCCCC DNREYLRRHFEINAESIAAAALSRLARDGKFDAKKAVAAFKDLGVDTEKIDAARA CCHHHHHHHHCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9171401; 10984043 [H]