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The map label for this gene is ydfM [H]

Identifier: 116624468

GI number: 116624468

Start: 6752378

End: 6753253

Strand: Reverse

Name: ydfM [H]

Synonym: Acid_5390

Alternate gene names: 116624468

Gene position: 6753253-6752378 (Counterclockwise)

Preceding gene: 116624469

Following gene: 116624467

Centisome position: 67.77

GC content: 67.01

Gene sequence:

>876_bases
ATGCAAATCGGTCAACGTGTCGCGGTCGCCGGGATGCTGGTCTCGGGCGCGTTGGCCCTGATCAAGATCTTCGCCGGGCT
GGCGGGGAATTCCACGGCCGTGGTGGCCGACGGATTGGAATCGGCCGCCGACGTGATCGCGTCGGGCTTCGTGCTGTTCG
GGCTGACGATTGCGGCGCGGCCCGCCGATGACAACCACCCCTACGGACACGGACGGGTGGAGACGCTTACCGGGCTCGTG
ATCGGGTTTGTGCTCACGGGCGGCGGTGCGCTGATCTCGTGGGGGTCGCTGCGCCGCCTGGGGCAGCCGACGGAGCCGCT
GGCGGCATTCGTCATTGGGCCGCTGGTGCTTTCGCTGTTCGCCAAGATGGGCCTGGCGGCGATGAAGTTCCGCTATGGCA
AGCGGCTGCACAGCGCGGCGCTGACCGCGGACGCGTGGAACGACGCGATGGATACCATCTCCGCTATGGTCGCGCTGGTG
GCGGTGGGGCTCACGCTCAGCGATCGCGTGAGGTTCGCCGAGGCGGACCGGTACGGCGGCTTCGTGGTGGGACTCATCGT
GATCGCGGCGGGGCTGCGCGTGTCGCGTGAAACCGCGATGCAGTTGATGGATACGATGCCGGGGGAGCCGCTGATTGCCG
AGATCCGATCGGCCGCGATGAGCGTGCCGGGAGTCGTGGGCGTGGAGAAGTGCTACGCGCGCAAGACCGGCATGAAGTAT
CACGTGGACCTGCATCTGGAAGTGGACCCGGAGATGACGGTGCGGCATTCGCATCAGCTGGCGCACGAGGTGCAGTTGTG
CATCATGGGACGGCTGGACTGGGTGGCGGACGTGCTGATACACGTCGAGCCGGCGCCGGACGGGCACAAAGCGTAA

Upstream 100 bases:

>100_bases
AAAGTTCGACGCGAAGAAGGCGGTGGCCGCCTTCAAAGATCTCGGCGTGGACACCGAGAAGATCGACGCCGCCCGCGCCT
GACGGCGCGGCGGGAACCTC

Downstream 100 bases:

>100_bases
TGGACTTACAATAGGTCACACATGGCAGCAGGCGACGCGCAAAGAGTCTGGTTTCCCGAGATGATCGAAGTGTTGCGTGA
GGAGTGGCGCCCGGAGATGC

Product: cation diffusion facilitator family transporter

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 291; Mature: 291

Protein sequence:

>291_residues
MQIGQRVAVAGMLVSGALALIKIFAGLAGNSTAVVADGLESAADVIASGFVLFGLTIAARPADDNHPYGHGRVETLTGLV
IGFVLTGGGALISWGSLRRLGQPTEPLAAFVIGPLVLSLFAKMGLAAMKFRYGKRLHSAALTADAWNDAMDTISAMVALV
AVGLTLSDRVRFAEADRYGGFVVGLIVIAAGLRVSRETAMQLMDTMPGEPLIAEIRSAAMSVPGVVGVEKCYARKTGMKY
HVDLHLEVDPEMTVRHSHQLAHEVQLCIMGRLDWVADVLIHVEPAPDGHKA

Sequences:

>Translated_291_residues
MQIGQRVAVAGMLVSGALALIKIFAGLAGNSTAVVADGLESAADVIASGFVLFGLTIAARPADDNHPYGHGRVETLTGLV
IGFVLTGGGALISWGSLRRLGQPTEPLAAFVIGPLVLSLFAKMGLAAMKFRYGKRLHSAALTADAWNDAMDTISAMVALV
AVGLTLSDRVRFAEADRYGGFVVGLIVIAAGLRVSRETAMQLMDTMPGEPLIAEIRSAAMSVPGVVGVEKCYARKTGMKY
HVDLHLEVDPEMTVRHSHQLAHEVQLCIMGRLDWVADVLIHVEPAPDGHKA
>Mature_291_residues
MQIGQRVAVAGMLVSGALALIKIFAGLAGNSTAVVADGLESAADVIASGFVLFGLTIAARPADDNHPYGHGRVETLTGLV
IGFVLTGGGALISWGSLRRLGQPTEPLAAFVIGPLVLSLFAKMGLAAMKFRYGKRLHSAALTADAWNDAMDTISAMVALV
AVGLTLSDRVRFAEADRYGGFVVGLIVIAAGLRVSRETAMQLMDTMPGEPLIAEIRSAAMSVPGVVGVEKCYARKTGMKY
HVDLHLEVDPEMTVRHSHQLAHEVQLCIMGRLDWVADVLIHVEPAPDGHKA

Specific function: Unknown

COG id: COG0053

COG function: function code P; Predicted Co/Zn/Cd cation transporters

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the cation diffusion facilitator (CDF) transporter (TC 2.A.4) family [H]

Homologues:

Organism=Escherichia coli, GI1790349, Length=271, Percent_Identity=28.4132841328413, Blast_Score=100, Evalue=1e-22,
Organism=Saccharomyces cerevisiae, GI6325032, Length=241, Percent_Identity=27.8008298755187, Blast_Score=77, Evalue=3e-15,
Organism=Saccharomyces cerevisiae, GI6323831, Length=212, Percent_Identity=26.8867924528302, Blast_Score=72, Evalue=8e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002524 [H]

Pfam domain/function: PF01545 Cation_efflux [H]

EC number: NA

Molecular weight: Translated: 30701; Mature: 30701

Theoretical pI: Translated: 6.86; Mature: 6.86

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
4.5 %Met     (Translated Protein)
5.2 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
4.5 %Met     (Mature Protein)
5.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQIGQRVAVAGMLVSGALALIKIFAGLAGNSTAVVADGLESAADVIASGFVLFGLTIAAR
CCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEECCHHHHHHHHHHHHHHHHHHHEEC
PADDNHPYGHGRVETLTGLVIGFVLTGGGALISWGSLRRLGQPTEPLAAFVIGPLVLSLF
CCCCCCCCCCCHHHHHHHHHHHHHHHCCCCEEECHHHHHCCCCCHHHHHHHHHHHHHHHH
AKMGLAAMKFRYGKRLHSAALTADAWNDAMDTISAMVALVAVGLTLSDRVRFAEADRYGG
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCC
FVVGLIVIAAGLRVSRETAMQLMDTMPGEPLIAEIRSAAMSVPGVVGVEKCYARKTGMKY
HHHHHHHHHHCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHCCCEE
HVDLHLEVDPEMTVRHSHQLAHEVQLCIMGRLDWVADVLIHVEPAPDGHKA
EEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCCCCCC
>Mature Secondary Structure
MQIGQRVAVAGMLVSGALALIKIFAGLAGNSTAVVADGLESAADVIASGFVLFGLTIAAR
CCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEECCHHHHHHHHHHHHHHHHHHHEEC
PADDNHPYGHGRVETLTGLVIGFVLTGGGALISWGSLRRLGQPTEPLAAFVIGPLVLSLF
CCCCCCCCCCCHHHHHHHHHHHHHHHCCCCEEECHHHHHCCCCCHHHHHHHHHHHHHHHH
AKMGLAAMKFRYGKRLHSAALTADAWNDAMDTISAMVALVAVGLTLSDRVRFAEADRYGG
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCC
FVVGLIVIAAGLRVSRETAMQLMDTMPGEPLIAEIRSAAMSVPGVVGVEKCYARKTGMKY
HHHHHHHHHHCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHCCCEE
HVDLHLEVDPEMTVRHSHQLAHEVQLCIMGRLDWVADVLIHVEPAPDGHKA
EEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]