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The map label for this gene is yhcS [H]

Identifier: 116624455

GI number: 116624455

Start: 6736953

End: 6737570

Strand: Direct

Name: yhcS [H]

Synonym: Acid_5377

Alternate gene names: 116624455

Gene position: 6736953-6737570 (Clockwise)

Preceding gene: 116624454

Following gene: 116624456

Centisome position: 67.6

GC content: 63.27

Gene sequence:

>618_bases
ATGCGCCGCCTTCACTTGAGCAACGACCAATGGAAAAATCTCGTCTCCTGCCTCCTGCTCGCCTGCGGCACCGCCCTGGT
TTTTCTGGGCATGCGCGTGCTCTTTGAGTCCTACTTCGGCCAAACCGCTGGCGCCCGCGACTTCGCCCCCGCGCCTCAAA
CCCAGCCCGTTTCCCTGCCCCTCGCTCCCCGGCGCGGCGACACCGTCGCCAAACTCTCCATCCCGCGGCTCGGCGCCCGG
TTCTACGTCTTCGAAGGCGATGACGACGCCGAACTCCGCCGCGGCCCGGGACACCTCGCCGACTCCGCCATGCCCGGCCC
TCGCGGCAATTGCGTCATCGCCGGCCACCGCGATACTCACTTTCGAGTCCTCAAGGATATCCGCAAGGATGACGATATCC
TGGTACAGACCGATACCGGCCAATATCTCTACCGCGTCAACTCCACCCAGATCGTCTCCCCCTCCGACACGCGTGCACTT
AAGCCAACCCGCGCTCCCGTACTCAACCTGATCACCTGCTATCCATTCTTCTTCGTGGGCTCGGCCCCCAAACGCTTCGT
CGTCCAGGCTCGCCTCGCCGGCCAGGTCGAAATAAGTAAAATGAGGAATGCCCGATAG

Upstream 100 bases:

>100_bases
CATGCTGCTTTCCGGAGGCACGCTTTCCGGCGCCGGCCTCATGCTGCGCCGCAAGCGCTAGCCCCTATCACCTGCTGCCC
GGAAAACCAGGGTCTGATTT

Downstream 100 bases:

>100_bases
TTCCGACGAGTTCTACCGCATTCAGAAACTGCCTCCGTACGTCTTCGCCGTTATCAACGAAATGCGCGCCAAGGCGCGCG
CCGCGCAGATCGATGTGATC

Product: sortase family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 205; Mature: 205

Protein sequence:

>205_residues
MRRLHLSNDQWKNLVSCLLLACGTALVFLGMRVLFESYFGQTAGARDFAPAPQTQPVSLPLAPRRGDTVAKLSIPRLGAR
FYVFEGDDDAELRRGPGHLADSAMPGPRGNCVIAGHRDTHFRVLKDIRKDDDILVQTDTGQYLYRVNSTQIVSPSDTRAL
KPTRAPVLNLITCYPFFFVGSAPKRFVVQARLAGQVEISKMRNAR

Sequences:

>Translated_205_residues
MRRLHLSNDQWKNLVSCLLLACGTALVFLGMRVLFESYFGQTAGARDFAPAPQTQPVSLPLAPRRGDTVAKLSIPRLGAR
FYVFEGDDDAELRRGPGHLADSAMPGPRGNCVIAGHRDTHFRVLKDIRKDDDILVQTDTGQYLYRVNSTQIVSPSDTRAL
KPTRAPVLNLITCYPFFFVGSAPKRFVVQARLAGQVEISKMRNAR
>Mature_205_residues
MRRLHLSNDQWKNLVSCLLLACGTALVFLGMRVLFESYFGQTAGARDFAPAPQTQPVSLPLAPRRGDTVAKLSIPRLGAR
FYVFEGDDDAELRRGPGHLADSAMPGPRGNCVIAGHRDTHFRVLKDIRKDDDILVQTDTGQYLYRVNSTQIVSPSDTRAL
KPTRAPVLNLITCYPFFFVGSAPKRFVVQARLAGQVEISKMRNAR

Specific function: Unknown

COG id: COG3764

COG function: function code M; Sortase (surface protein transpeptidase)

Gene ontology:

Cell location: Membrane; Single-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005754 [H]

Pfam domain/function: PF04203 Sortase [H]

EC number: NA

Molecular weight: Translated: 22772; Mature: 22772

Theoretical pI: Translated: 10.33; Mature: 10.33

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.0 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
2.0 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRRLHLSNDQWKNLVSCLLLACGTALVFLGMRVLFESYFGQTAGARDFAPAPQTQPVSLP
CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEECC
LAPRRGDTVAKLSIPRLGARFYVFEGDDDAELRRGPGHLADSAMPGPRGNCVIAGHRDTH
CCCCCCCEEEEEECCCCCCEEEEEECCCCHHHHCCCCCCCCCCCCCCCCCEEEECCCCCH
FRVLKDIRKDDDILVQTDTGQYLYRVNSTQIVSPSDTRALKPTRAPVLNLITCYPFFFVG
HHHHHHHCCCCCEEEEECCCCEEEEECCCEEECCCCCCCCCCCHHHHHHHHHHHHHHHCC
SAPKRFVVQARLAGQVEISKMRNAR
CCCHHEEEEEHHCCCEEEHHHCCCC
>Mature Secondary Structure
MRRLHLSNDQWKNLVSCLLLACGTALVFLGMRVLFESYFGQTAGARDFAPAPQTQPVSLP
CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEECC
LAPRRGDTVAKLSIPRLGARFYVFEGDDDAELRRGPGHLADSAMPGPRGNCVIAGHRDTH
CCCCCCCEEEEEECCCCCCEEEEEECCCCHHHHCCCCCCCCCCCCCCCCCEEEECCCCCH
FRVLKDIRKDDDILVQTDTGQYLYRVNSTQIVSPSDTRALKPTRAPVLNLITCYPFFFVG
HHHHHHHCCCCCEEEEECCCCEEEEECCCEEECCCCCCCCCCCHHHHHHHHHHHHHHHCC
SAPKRFVVQARLAGQVEISKMRNAR
CCCHHEEEEEHHCCCEEEHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8969498; 9384377 [H]