| Definition | Candidatus Solibacter usitatus Ellin6076 chromosome, complete genome. |
|---|---|
| Accession | NC_008536 |
| Length | 9,965,640 |
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The map label for this gene is 116624454
Identifier: 116624454
GI number: 116624454
Start: 6736110
End: 6736913
Strand: Direct
Name: 116624454
Synonym: Acid_5376
Alternate gene names: NA
Gene position: 6736110-6736913 (Clockwise)
Preceding gene: 116624452
Following gene: 116624455
Centisome position: 67.59
GC content: 60.45
Gene sequence:
>804_bases ATGAAAACGAACTTATTGAGAAATACGGTGGGCGCAATCGCGCTCGCGAGCGCCGGCTGGCTCGCGGTCGTCAACTTGAC CGCCCAGCCAATGTACGATCGCATTCACGTCAACCTGCCCTATACGGTCACCCTGCAGAACTACACACTACAACCCGGCG ACTACACCATTCAGCAGTTGCCCAGCGCCGCCGGCGACAGTCGAATTCTCCTCTTCTACAGTAAGGACGGAATGAAATTC GAAACTTCCGCCATGACTATACCCACGCTGGATCAGAATACACCCAGCGATACCAAAGTGATCCTCAGCCACGCCGGCGA TGATTACTACATCAGCAAGATCTGGGTGCAAGGTAAAGATTACGGCTACGAATTACCCGTGCCTAAATCCATCAAGGAAC GTCAGAACGAGCGCACTACCGAGAGCACTGTGAGCGCAACCTATCAGCCCTCGTCCTCCACTGACGTGACCACCTCCGCG GCTTCCACCGCGACAACAGCCGCCGCGCAGCCGGTCCAAACCACGCCCCCTGCGAACGCCAACAGCAACAATACGGCCGA CACCACGAACACTCCCGCGGCCACACCGACCCCCGCGCCCACACCCGTGGAAACAGCCCAGGCCGCGCCCGCGACGCAAC CTTCTACGCCCAACAACTCCGCCGATCGTTCCATGGACCAGGCGCCCGCCGATACCACGGCGAATCGCACCAGCATGCCT TCCACCGCGGCCGGTTGGTTGACCATGCTGCTTTCCGGAGGCACGCTTTCCGGCGCCGGCCTCATGCTGCGCCGCAAGCG CTAG
Upstream 100 bases:
>100_bases GCCTTGACACGGCCCGCGGCCCGATCGTGCGCCCCGTGGCATACCGCTTGCAGTCTTGTACCGCGGAACGCGCCGATAAC AATACTAAGGAGTCGTAATC
Downstream 100 bases:
>100_bases CCCCTATCACCTGCTGCCCGGAAAACCAGGGTCTGATTTATGCGCCGCCTTCACTTGAGCAACGACCAATGGAAAAATCT CGTCTCCTGCCTCCTGCTCG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 267; Mature: 267
Protein sequence:
>267_residues MKTNLLRNTVGAIALASAGWLAVVNLTAQPMYDRIHVNLPYTVTLQNYTLQPGDYTIQQLPSAAGDSRILLFYSKDGMKF ETSAMTIPTLDQNTPSDTKVILSHAGDDYYISKIWVQGKDYGYELPVPKSIKERQNERTTESTVSATYQPSSSTDVTTSA ASTATTAAAQPVQTTPPANANSNNTADTTNTPAATPTPAPTPVETAQAAPATQPSTPNNSADRSMDQAPADTTANRTSMP STAAGWLTMLLSGGTLSGAGLMLRRKR
Sequences:
>Translated_267_residues MKTNLLRNTVGAIALASAGWLAVVNLTAQPMYDRIHVNLPYTVTLQNYTLQPGDYTIQQLPSAAGDSRILLFYSKDGMKF ETSAMTIPTLDQNTPSDTKVILSHAGDDYYISKIWVQGKDYGYELPVPKSIKERQNERTTESTVSATYQPSSSTDVTTSA ASTATTAAAQPVQTTPPANANSNNTADTTNTPAATPTPAPTPVETAQAAPATQPSTPNNSADRSMDQAPADTTANRTSMP STAAGWLTMLLSGGTLSGAGLMLRRKR >Mature_267_residues MKTNLLRNTVGAIALASAGWLAVVNLTAQPMYDRIHVNLPYTVTLQNYTLQPGDYTIQQLPSAAGDSRILLFYSKDGMKF ETSAMTIPTLDQNTPSDTKVILSHAGDDYYISKIWVQGKDYGYELPVPKSIKERQNERTTESTVSATYQPSSSTDVTTSA ASTATTAAAQPVQTTPPANANSNNTADTTNTPAATPTPAPTPVETAQAAPATQPSTPNNSADRSMDQAPADTTANRTSMP STAAGWLTMLLSGGTLSGAGLMLRRKR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 28334; Mature: 28334
Theoretical pI: Translated: 6.54; Mature: 6.54
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.0 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKTNLLRNTVGAIALASAGWLAVVNLTAQPMYDRIHVNLPYTVTLQNYTLQPGDYTIQQL CCCCHHHHHHHHHHHHCCCEEEEEEECCCCCCCEEEECCCEEEEEECEEECCCCCHHHHC PSAAGDSRILLFYSKDGMKFETSAMTIPTLDQNTPSDTKVILSHAGDDYYISKIWVQGKD CCCCCCCEEEEEECCCCCEEECCEEEECCCCCCCCCCCEEEEECCCCCEEEEEEEECCCC YGYELPVPKSIKERQNERTTESTVSATYQPSSSTDVTTSAASTATTAAAQPVQTTPPANA CCEECCCCHHHHHHHHHHCHHHHEEEEECCCCCCCEEECCCCHHHHHHCCCCCCCCCCCC NSNNTADTTNTPAATPTPAPTPVETAQAAPATQPSTPNNSADRSMDQAPADTTANRTSMP CCCCCCCCCCCCCCCCCCCCCCCCHHCCCCCCCCCCCCCHHHHHHHCCCCCCCCCCCCCC STAAGWLTMLLSGGTLSGAGLMLRRKR CHHHHHHHHHHCCCCCCCCEEEEEECC >Mature Secondary Structure MKTNLLRNTVGAIALASAGWLAVVNLTAQPMYDRIHVNLPYTVTLQNYTLQPGDYTIQQL CCCCHHHHHHHHHHHHCCCEEEEEEECCCCCCCEEEECCCEEEEEECEEECCCCCHHHHC PSAAGDSRILLFYSKDGMKFETSAMTIPTLDQNTPSDTKVILSHAGDDYYISKIWVQGKD CCCCCCCEEEEEECCCCCEEECCEEEECCCCCCCCCCCEEEEECCCCCEEEEEEEECCCC YGYELPVPKSIKERQNERTTESTVSATYQPSSSTDVTTSAASTATTAAAQPVQTTPPANA CCEECCCCHHHHHHHHHHCHHHHEEEEECCCCCCCEEECCCCHHHHHHCCCCCCCCCCCC NSNNTADTTNTPAATPTPAPTPVETAQAAPATQPSTPNNSADRSMDQAPADTTANRTSMP CCCCCCCCCCCCCCCCCCCCCCCCHHCCCCCCCCCCCCCHHHHHHHCCCCCCCCCCCCCC STAAGWLTMLLSGGTLSGAGLMLRRKR CHHHHHHHHHHCCCCCCCCEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA