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The map label for this gene is rimP [H]

Identifier: 116624261

GI number: 116624261

Start: 6505207

End: 6505731

Strand: Direct

Name: rimP [H]

Synonym: Acid_5179

Alternate gene names: 116624261

Gene position: 6505207-6505731 (Clockwise)

Preceding gene: 116624260

Following gene: 116624262

Centisome position: 65.28

GC content: 57.33

Gene sequence:

>525_bases
TTGTCGAGCCAAACCAGTGGGCGAAAGCCCACTTTTTTGTTGGCCGCGGCAATTTTGGCAACAATGCAGGAAGCAGTGAC
GTCCAAAGTCGAAGAAGTCGCGCAGCGGGTGGCGCAGTCCGAAGGCCTGGAATTAGTCGAAGTCGAGGTCAAAGGCGGCG
GCAGCGCCCGTCTTGTGCGGATTTCTATCGATAAGCCCGAGGGCGTGACGCACGCTGATTGTCAGACGGTTTCCGATAAG
GTCGGAGAGATCCTCGAAGCCGAAGATGCCATCCCGGGCCATTATACGCTCGAAGTCAGTTCTCCCGGGGTAGAGCGTAA
ACTGTTAAAGCCACAGGATTACCAACGGTTCCATGGGCAAAAGGCAAAGATCACGGTGCGCGAAGAAGTAGACGGACGGC
GCACTTGGGAAGGGACGCTCGCGGGATTCGCGGACGGTGTGATCTCCCTGGAAGTCGCGCCCGGCGAAATCCGCCGGCTT
CCGTTCGATCAAGTCAAGAAGGCCAACCTGAAGTTTGAGTGGTAG

Upstream 100 bases:

>100_bases
ACGCACCCCGCCATTTTTTTGGGCCGCTTCCCGGCACAGTGCGGCGGAAAACAATCGACCCTTGGCCAATCCTTGTAAAC
AGGCTACAATAGGGATTGAG

Downstream 100 bases:

>100_bases
CCCGCCGGGGAAGATTTTAGCCAACACACATTTTGAATTGGATAACGAGGGCACTTTGGAAACGATTTTTCAATCCATCG
AAATCTTGAGCAAGGAAAAA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 174; Mature: 173

Protein sequence:

>174_residues
MSSQTSGRKPTFLLAAAILATMQEAVTSKVEEVAQRVAQSEGLELVEVEVKGGGSARLVRISIDKPEGVTHADCQTVSDK
VGEILEAEDAIPGHYTLEVSSPGVERKLLKPQDYQRFHGQKAKITVREEVDGRRTWEGTLAGFADGVISLEVAPGEIRRL
PFDQVKKANLKFEW

Sequences:

>Translated_174_residues
MSSQTSGRKPTFLLAAAILATMQEAVTSKVEEVAQRVAQSEGLELVEVEVKGGGSARLVRISIDKPEGVTHADCQTVSDK
VGEILEAEDAIPGHYTLEVSSPGVERKLLKPQDYQRFHGQKAKITVREEVDGRRTWEGTLAGFADGVISLEVAPGEIRRL
PFDQVKKANLKFEW
>Mature_173_residues
SSQTSGRKPTFLLAAAILATMQEAVTSKVEEVAQRVAQSEGLELVEVEVKGGGSARLVRISIDKPEGVTHADCQTVSDKV
GEILEAEDAIPGHYTLEVSSPGVERKLLKPQDYQRFHGQKAKITVREEVDGRRTWEGTLAGFADGVISLEVAPGEIRRLP
FDQVKKANLKFEW

Specific function: Required for maturation of 30S ribosomal subunits [H]

COG id: COG0779

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasm (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the rimP family [H]

Homologues:

Organism=Escherichia coli, GI226510978, Length=142, Percent_Identity=35.2112676056338, Blast_Score=88, Evalue=3e-19,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003728 [H]

Pfam domain/function: PF02576 DUF150 [H]

EC number: NA

Molecular weight: Translated: 19043; Mature: 18912

Theoretical pI: Translated: 5.38; Mature: 5.38

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
1.7 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
0.6 %Met     (Mature Protein)
1.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSSQTSGRKPTFLLAAAILATMQEAVTSKVEEVAQRVAQSEGLELVEVEVKGGGSARLVR
CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEECCCCCEEEEE
ISIDKPEGVTHADCQTVSDKVGEILEAEDAIPGHYTLEVSSPGVERKLLKPQDYQRFHGQ
EEECCCCCCCCCHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCHHHCCCCCHHHHHCCC
KAKITVREEVDGRRTWEGTLAGFADGVISLEVAPGEIRRLPFDQVKKANLKFEW
CEEEEEECCCCCCCCCCHHHHHHCCCEEEEEECCCHHHCCCHHHHHHCCCEECC
>Mature Secondary Structure 
SSQTSGRKPTFLLAAAILATMQEAVTSKVEEVAQRVAQSEGLELVEVEVKGGGSARLVR
CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEECCCCCEEEEE
ISIDKPEGVTHADCQTVSDKVGEILEAEDAIPGHYTLEVSSPGVERKLLKPQDYQRFHGQ
EEECCCCCCCCCHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCHHHCCCCCHHHHHCCC
KAKITVREEVDGRRTWEGTLAGFADGVISLEVAPGEIRRLPFDQVKKANLKFEW
CEEEEEECCCCCCCCCCHHHHHHCCCEEEEEECCCHHHCCCHHHHHHCCCEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA