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The map label for this gene is 116624260

Identifier: 116624260

GI number: 116624260

Start: 6504517

End: 6505062

Strand: Direct

Name: 116624260

Synonym: Acid_5178

Alternate gene names: NA

Gene position: 6504517-6505062 (Clockwise)

Preceding gene: 116624259

Following gene: 116624261

Centisome position: 65.27

GC content: 58.79

Gene sequence:

>546_bases
ATGAACCTCTGTAAGAATATCTCTGTCATCACTATTGCGGCCGCCTGCGTAGCGCTGGCCGCGAAGTACCCGGTGGTCGG
GGGACAGGAGATGCTCCCGACCAAAAATATCGTGCAGAACGCGGTGAATTCGGCCGATCACACCACGCTCGTCGCTGCCG
TGAAAGCAGCCGGCCTGGTAGATACCCTTCAAGCTCCCGGCCCGTTCACGGTGTTCGCGCCGACCAATGCCGCCTTCAGC
AAGCTGCCGGCGGGAACTGTGGATACGCTGCTGAAGCCGGAAAACAAGGATGCTCTGAGCAAGATTTTGACTTATCACGT
GGTTGCCGGCCGGATGAGCGCGATGGATTTAAAAACGGCGATCAAAACCGGCGGCGGCAAGGCCGAATTGAACACGGTCA
GCGGCGGAAAGCTGTGGGCCGTACTGAAGGGCAACCGGATCATGCTGAAGGACGAGAAGGGCGACGTAGCGTCGGTCACG
CAGGCCGATGTCTTCCAGTCCAACGGCGTGATCCACGTGATTGATGCTGTGGTTCTCCCCAACTGA

Upstream 100 bases:

>100_bases
TCACCCGGCGCGATTGCCCTACATCCGATTCGCCCGCAAACTTCGTAGTCATCAGTGAACACGGGGACGTACCCGATCCG
AATCGAAAGGAAAAAAGAAA

Downstream 100 bases:

>100_bases
CGACGTTACCCCTAGACGAGGGCTCTGGCGGGATGCGTACCAAAACGCACCCCGCCATTTTTTTGGGCCGCTTCCCGGCA
CAGTGCGGCGGAAAACAATC

Product: beta-Ig-H3/fasciclin

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 181; Mature: 181

Protein sequence:

>181_residues
MNLCKNISVITIAAACVALAAKYPVVGGQEMLPTKNIVQNAVNSADHTTLVAAVKAAGLVDTLQAPGPFTVFAPTNAAFS
KLPAGTVDTLLKPENKDALSKILTYHVVAGRMSAMDLKTAIKTGGGKAELNTVSGGKLWAVLKGNRIMLKDEKGDVASVT
QADVFQSNGVIHVIDAVVLPN

Sequences:

>Translated_181_residues
MNLCKNISVITIAAACVALAAKYPVVGGQEMLPTKNIVQNAVNSADHTTLVAAVKAAGLVDTLQAPGPFTVFAPTNAAFS
KLPAGTVDTLLKPENKDALSKILTYHVVAGRMSAMDLKTAIKTGGGKAELNTVSGGKLWAVLKGNRIMLKDEKGDVASVT
QADVFQSNGVIHVIDAVVLPN
>Mature_181_residues
MNLCKNISVITIAAACVALAAKYPVVGGQEMLPTKNIVQNAVNSADHTTLVAAVKAAGLVDTLQAPGPFTVFAPTNAAFS
KLPAGTVDTLLKPENKDALSKILTYHVVAGRMSAMDLKTAIKTGGGKAELNTVSGGKLWAVLKGNRIMLKDEKGDVASVT
QADVFQSNGVIHVIDAVVLPN

Specific function: Unknown

COG id: COG2335

COG function: function code M; Secreted and surface protein containing fasciclin-like repeats

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 FAS1 domain [H]

Homologues:

Organism=Homo sapiens, GI4507467, Length=138, Percent_Identity=35.5072463768116, Blast_Score=70, Evalue=8e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000782 [H]

Pfam domain/function: PF02469 Fasciclin [H]

EC number: NA

Molecular weight: Translated: 18735; Mature: 18735

Theoretical pI: Translated: 9.56; Mature: 9.56

Prosite motif: PS00013 PROKAR_LIPOPROTEIN ; PS50213 FAS1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNLCKNISVITIAAACVALAAKYPVVGGQEMLPTKNIVQNAVNSADHTTLVAAVKAAGLV
CCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHCCCCHHHHHHHHHHHCHH
DTLQAPGPFTVFAPTNAAFSKLPAGTVDTLLKPENKDALSKILTYHVVAGRMSAMDLKTA
HHHCCCCCEEEECCCCHHHHHCCCCCHHHHCCCCCHHHHHHHHHHHHHHCCHHHHHHHHH
IKTGGGKAELNTVSGGKLWAVLKGNRIMLKDEKGDVASVTQADVFQSNGVIHVIDAVVLP
HHCCCCCEEEEEECCCEEEEEEECCEEEEECCCCCCCHHHHHHHHHCCCEEEEEEEEECC
N
C
>Mature Secondary Structure
MNLCKNISVITIAAACVALAAKYPVVGGQEMLPTKNIVQNAVNSADHTTLVAAVKAAGLV
CCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHCCCCHHHHHHHHHHHCHH
DTLQAPGPFTVFAPTNAAFSKLPAGTVDTLLKPENKDALSKILTYHVVAGRMSAMDLKTA
HHHCCCCCEEEECCCCHHHHHCCCCCHHHHCCCCCHHHHHHHHHHHHHHCCHHHHHHHHH
IKTGGGKAELNTVSGGKLWAVLKGNRIMLKDEKGDVASVTQADVFQSNGVIHVIDAVVLP
HHCCCCCEEEEEECCCEEEEEEECCEEEEECCCCCCCHHHHHHHHHCCCEEEEEEEEECC
N
C

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8905231 [H]