| Definition | Candidatus Solibacter usitatus Ellin6076 chromosome, complete genome. |
|---|---|
| Accession | NC_008536 |
| Length | 9,965,640 |
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The map label for this gene is 116624259
Identifier: 116624259
GI number: 116624259
Start: 6503653
End: 6504390
Strand: Direct
Name: 116624259
Synonym: Acid_5177
Alternate gene names: NA
Gene position: 6503653-6504390 (Clockwise)
Preceding gene: 116624258
Following gene: 116624260
Centisome position: 65.26
GC content: 64.77
Gene sequence:
>738_bases ATGGCACTCGATCTCCAGGCGCTCGCGAAGTTCGACACTCCCACCATTTGCAACACCATCGAGCTCTTTGAAGTGCGCCC GCGCACTGCGGGCTATATGGACGGCCGCATTCGCGCCTGCTTCCCGGAGATGCCGCCCGCCGTCGGGTATGCGGCCACCG CGACCATGCGCTGCGCCCTTCCCAAACAGGACGGAGACGTCTATGGTTCCCTCGACGAGCAGGTGGCGCGGTTCGCCGAA CTTCCCGGCCCCCCGATCGTGGTCTTCCAGGACCTGGATGATCCGCCCGTGTCAGCCACCTTCGGCGAGATCATGTGTAC CACCTACCAGGCCTTCGGCGCCGCCGGCCTCGTGACATCCGGCGCGGCGCGCGACCTGGACCAGGTGCGGCGTATTGGCT TCCCTGCCTTCTCTAACGGTGTCATCTGCTCGCACGGTTACAGCCACATTGTGGATTTGCATCGTACCGTGCGGGTCGGC GGACTCACGATTCACGCGGGCGATTTGATTCACGCCGACACCAACGGCGTCGCGACCATCCCGCTCGCCATCGCGGACCA GATCGCCGGCGCAGCGGCGGAATTCGTGAAGGCCGAAGCCATCGTCCTGGACTACCTGAAGACCGGACGCCCCGACACGC ACCATTTCTCCGAGGCGCGCAAAGGTATGATGGACGCCCTCGGCGCATTGGGCAAGAGACTGCGTGGGCGAGACGCCGCC ATAAAGGCCGCGAGATAA
Upstream 100 bases:
>100_bases TCTCTGCGTGACTCTGCGGCTCTGCGGCTCAGCGAGAAACAGCAGCTTTCTCGCGACCACGCAGCCCCCCCGGAGAACCT GCGTTACAATCAGCGCTTCT
Downstream 100 bases:
>100_bases AACTCGAATCACTTACCCCGGTGAAGTCACCCGGCGCGATTGCCCTACATCCGATTCGCCCGCAAACTTCGTAGTCATCA GTGAACACGGGGACGTACCC
Product: demethylmenaquinone methyltransferase-like protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 245; Mature: 244
Protein sequence:
>245_residues MALDLQALAKFDTPTICNTIELFEVRPRTAGYMDGRIRACFPEMPPAVGYAATATMRCALPKQDGDVYGSLDEQVARFAE LPGPPIVVFQDLDDPPVSATFGEIMCTTYQAFGAAGLVTSGAARDLDQVRRIGFPAFSNGVICSHGYSHIVDLHRTVRVG GLTIHAGDLIHADTNGVATIPLAIADQIAGAAAEFVKAEAIVLDYLKTGRPDTHHFSEARKGMMDALGALGKRLRGRDAA IKAAR
Sequences:
>Translated_245_residues MALDLQALAKFDTPTICNTIELFEVRPRTAGYMDGRIRACFPEMPPAVGYAATATMRCALPKQDGDVYGSLDEQVARFAE LPGPPIVVFQDLDDPPVSATFGEIMCTTYQAFGAAGLVTSGAARDLDQVRRIGFPAFSNGVICSHGYSHIVDLHRTVRVG GLTIHAGDLIHADTNGVATIPLAIADQIAGAAAEFVKAEAIVLDYLKTGRPDTHHFSEARKGMMDALGALGKRLRGRDAA IKAAR >Mature_244_residues ALDLQALAKFDTPTICNTIELFEVRPRTAGYMDGRIRACFPEMPPAVGYAATATMRCALPKQDGDVYGSLDEQVARFAEL PGPPIVVFQDLDDPPVSATFGEIMCTTYQAFGAAGLVTSGAARDLDQVRRIGFPAFSNGVICSHGYSHIVDLHRTVRVGG LTIHAGDLIHADTNGVATIPLAIADQIAGAAAEFVKAEAIVLDYLKTGRPDTHHFSEARKGMMDALGALGKRLRGRDAAI KAAR
Specific function: Unknown
COG id: COG0684
COG function: function code H; Demethylmenaquinone methyltransferase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 26113; Mature: 25982
Theoretical pI: Translated: 6.39; Mature: 6.39
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.0 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 4.9 %Cys+Met (Translated Protein) 2.0 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 4.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MALDLQALAKFDTPTICNTIELFEVRPRTAGYMDGRIRACFPEMPPAVGYAATATMRCAL CCCCHHHHHHCCCCCHHCCEEEEEECCCCCCCCCCCEEEECCCCCCCCCHHHHHEEEEEC PKQDGDVYGSLDEQVARFAELPGPPIVVFQDLDDPPVSATFGEIMCTTYQAFGAAGLVTS CCCCCCCCCCHHHHHHHHHHCCCCCEEEEECCCCCCCCHHHHHHHHHHHHHHCCHHHHCC GAARDLDQVRRIGFPAFSNGVICSHGYSHIVDLHRTVRVGGLTIHAGDLIHADTNGVATI CCHHHHHHHHHHCCCCCCCCEEECCCHHHHHHHHHHEEECCEEEECCCEEEECCCCEEEE PLAIADQIAGAAAEFVKAEAIVLDYLKTGRPDTHHFSEARKGMMDALGALGKRLRGRDAA HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCH IKAAR HCCCC >Mature Secondary Structure ALDLQALAKFDTPTICNTIELFEVRPRTAGYMDGRIRACFPEMPPAVGYAATATMRCAL CCCHHHHHHCCCCCHHCCEEEEEECCCCCCCCCCCEEEECCCCCCCCCHHHHHEEEEEC PKQDGDVYGSLDEQVARFAELPGPPIVVFQDLDDPPVSATFGEIMCTTYQAFGAAGLVTS CCCCCCCCCCHHHHHHHHHHCCCCCEEEEECCCCCCCCHHHHHHHHHHHHHHCCHHHHCC GAARDLDQVRRIGFPAFSNGVICSHGYSHIVDLHRTVRVGGLTIHAGDLIHADTNGVATI CCHHHHHHHHHHCCCCCCCCEEECCCHHHHHHHHHHEEECCEEEECCCEEEECCCCEEEE PLAIADQIAGAAAEFVKAEAIVLDYLKTGRPDTHHFSEARKGMMDALGALGKRLRGRDAA HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCH IKAAR HCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA