| Definition | Candidatus Solibacter usitatus Ellin6076 chromosome, complete genome. |
|---|---|
| Accession | NC_008536 |
| Length | 9,965,640 |
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The map label for this gene is 116624145
Identifier: 116624145
GI number: 116624145
Start: 6393860
End: 6395185
Strand: Direct
Name: 116624145
Synonym: Acid_5061
Alternate gene names: NA
Gene position: 6393860-6395185 (Clockwise)
Preceding gene: 116624144
Following gene: 116624148
Centisome position: 64.16
GC content: 63.12
Gene sequence:
>1326_bases ATGGCTGAGATAGTGCTCGAACTGGAAGACATTCAGCGTGGAGTGCTGCGCCCGCGTCCGGCTCCTTATGCGGCAACGTA TGTGCTCTTCCGCATCGACGATCGCAGCGCCGGCCGCGAGTTGATGCGCCGGATGCGGTCGGTGGTCGATTCGGCGAAGC CCGCCGGGCGCTCCGCCGAAGATACCTGGGTGAGCGTCGCGCTGAGCTATCAGGGGCTGAAGATGTTGGGCGTGCCCCAG GCATCGCTCGATAGTTTCTCGATAGAGTTCCGGCAGGGGATGGCAGCCCGGGCCAAATCGCTCGGCGACAGCGGTGAAAG CAGTCCCGAGCACTGGGAGAAGCCGCTCGGGTCAACCGACGTCCACGTCGTGATCACCGCCGTGGCGCCGGGCGTTCCGC AATTGGAAGCAGCCTTCGAGAGGGCCCGAAAGAGCTACCAGGAACTCAACGGAGTCGCGGCCATCTGGCGGCAGGATTGT CATGTGCTGCCGGGTGAAAGGGAGGCCTTCGGATTCAAGGACGGCGTCAGCCATCCCGCGATCGAGGGGTCTGGGATCCC CGGCACCAATCCTCACGAGCATCCGCTTAAACCGGGCGAATTCGTGCTGGGTTATCCCGACGAGATGAGCGAAGCCCCGC AGATACCGCAGCCCGATGTTCTCGGACGCAACGGAAGTTACGTTGTCTTTCGCAAGCTGCACCAGCGCGTCGCCGAGTTT CGGCGGTACCTGAAGACCAACGCCGCTGACGTCGCGGAAGAGGAATTCCTGGCCGCGAAAATGATGGGGCGGTGGCGAAG CGGAGCTCCCCTGGCTCTCTGTCCGATGCACGACGACCCCGCGCTTGGCGTGGATGCCCAGCGCAATAACGCGTTCGTCT TCGAAGACGATGCGATCGGCTACAAGACCCCCGAAGGGTCGCACATCCGCCGCATGAATCCCCGGGATTCCAATGTGGCG GGAGTGGTTCGCATCCACCGGATGATCCGCCGCGGCACCTCCTATGGTCCGCTGCTTCCGGAAGGAGTCCTGGAAGACGA TGGCGTGGACCGCGGGCTGATGTTCGCGTTTGTCGGCGCACATCCGGGCCGTCAGTTCGAATTCATTCAGTCGGAATGGA TGAACGACAGTGCCTTCTTTGGCGGGAACACCGGAAGGGATCCGGTGAGTGGGTCAGGCGATGGAACCGGCACTTTCGAT ATTCCCACGCGCCCGATCCGGCGGCGATTGCAGGGGCTGCCGCGATTCGTGGTCACGCGCGGAGGCGAATACTGCTTCAT GCCAGGTCTGCGGGCGCTGGAGTGGCTCGGGAATTTGACGACTTAG
Upstream 100 bases:
>100_bases GCAAGCGTCGGCTTCCGCTTCTTCAAGGAGTTCGCCAACCGCTCGACGTTTCAGGGCTATTCGGCTCAGATTTCGGCGGC GATCCACTTATGAGGATTCA
Downstream 100 bases:
>100_bases CGTTTGGCTTCGGCGTTGGCGCGATTCAATAGCGCGCGCATGTAGCCGTACCCGTAGGCCGTCTGCGCGTAGTTGCCGCC GACCATCCCGGGCGAGTGAT
Product: Dyp-type peroxidase family protein
Products: NA
Alternate protein names: Dyp-Type Peroxidase Family Protein; Dyp-Type Peroxidase Family; Cytochrome; Dyp-Type Peroxidase; Iron-Dependent Peroxidase-Like Protein; Peroxidase Family Protein; Iron-Dependent Peroxidase; Peroxidase Protein; Peroxidase-Like Protein
Number of amino acids: Translated: 441; Mature: 440
Protein sequence:
>441_residues MAEIVLELEDIQRGVLRPRPAPYAATYVLFRIDDRSAGRELMRRMRSVVDSAKPAGRSAEDTWVSVALSYQGLKMLGVPQ ASLDSFSIEFRQGMAARAKSLGDSGESSPEHWEKPLGSTDVHVVITAVAPGVPQLEAAFERARKSYQELNGVAAIWRQDC HVLPGEREAFGFKDGVSHPAIEGSGIPGTNPHEHPLKPGEFVLGYPDEMSEAPQIPQPDVLGRNGSYVVFRKLHQRVAEF RRYLKTNAADVAEEEFLAAKMMGRWRSGAPLALCPMHDDPALGVDAQRNNAFVFEDDAIGYKTPEGSHIRRMNPRDSNVA GVVRIHRMIRRGTSYGPLLPEGVLEDDGVDRGLMFAFVGAHPGRQFEFIQSEWMNDSAFFGGNTGRDPVSGSGDGTGTFD IPTRPIRRRLQGLPRFVVTRGGEYCFMPGLRALEWLGNLTT
Sequences:
>Translated_441_residues MAEIVLELEDIQRGVLRPRPAPYAATYVLFRIDDRSAGRELMRRMRSVVDSAKPAGRSAEDTWVSVALSYQGLKMLGVPQ ASLDSFSIEFRQGMAARAKSLGDSGESSPEHWEKPLGSTDVHVVITAVAPGVPQLEAAFERARKSYQELNGVAAIWRQDC HVLPGEREAFGFKDGVSHPAIEGSGIPGTNPHEHPLKPGEFVLGYPDEMSEAPQIPQPDVLGRNGSYVVFRKLHQRVAEF RRYLKTNAADVAEEEFLAAKMMGRWRSGAPLALCPMHDDPALGVDAQRNNAFVFEDDAIGYKTPEGSHIRRMNPRDSNVA GVVRIHRMIRRGTSYGPLLPEGVLEDDGVDRGLMFAFVGAHPGRQFEFIQSEWMNDSAFFGGNTGRDPVSGSGDGTGTFD IPTRPIRRRLQGLPRFVVTRGGEYCFMPGLRALEWLGNLTT >Mature_440_residues AEIVLELEDIQRGVLRPRPAPYAATYVLFRIDDRSAGRELMRRMRSVVDSAKPAGRSAEDTWVSVALSYQGLKMLGVPQA SLDSFSIEFRQGMAARAKSLGDSGESSPEHWEKPLGSTDVHVVITAVAPGVPQLEAAFERARKSYQELNGVAAIWRQDCH VLPGEREAFGFKDGVSHPAIEGSGIPGTNPHEHPLKPGEFVLGYPDEMSEAPQIPQPDVLGRNGSYVVFRKLHQRVAEFR RYLKTNAADVAEEEFLAAKMMGRWRSGAPLALCPMHDDPALGVDAQRNNAFVFEDDAIGYKTPEGSHIRRMNPRDSNVAG VVRIHRMIRRGTSYGPLLPEGVLEDDGVDRGLMFAFVGAHPGRQFEFIQSEWMNDSAFFGGNTGRDPVSGSGDGTGTFDI PTRPIRRRLQGLPRFVVTRGGEYCFMPGLRALEWLGNLTT
Specific function: Unknown
COG id: COG2837
COG function: function code P; Predicted iron-dependent peroxidase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 48630; Mature: 48498
Theoretical pI: Translated: 6.60; Mature: 6.60
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 3.2 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 3.0 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAEIVLELEDIQRGVLRPRPAPYAATYVLFRIDDRSAGRELMRRMRSVVDSAKPAGRSAE CCEEEEEHHHHHHHHCCCCCCCCEEEEEEEEECCCHHHHHHHHHHHHHHHCCCCCCCCCC DTWVSVALSYQGLKMLGVPQASLDSFSIEFRQGMAARAKSLGDSGESSPEHWEKPLGSTD CCEEEEEEEECCEEEECCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCHHHHHCCCCCCC VHVVITAVAPGVPQLEAAFERARKSYQELNGVAAIWRQDCHVLPGEREAFGFKDGVSHPA EEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHCCCCCCCCCCC IEGSGIPGTNPHEHPLKPGEFVLGYPDEMSEAPQIPQPDVLGRNGSYVVFRKLHQRVAEF CCCCCCCCCCCCCCCCCCCCEEEECCHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHH RRYLKTNAADVAEEEFLAAKMMGRWRSGAPLALCPMHDDPALGVDAQRNNAFVFEDDAIG HHHHHCCHHHHHHHHHHHHHHHHCCCCCCCEEEECCCCCCCCCCCCCCCCEEEEECCCCC YKTPEGSHIRRMNPRDSNVAGVVRIHRMIRRGTSYGPLLPEGVLEDDGVDRGLMFAFVGA CCCCCCCCEEECCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCEEEEEECC HPGRQFEFIQSEWMNDSAFFGGNTGRDPVSGSGDGTGTFDIPTRPIRRRLQGLPRFVVTR CCCCCHHHHHHHCCCCCCEECCCCCCCCCCCCCCCCEEECCCCHHHHHHHHCCCEEEECC GGEYCFMPGLRALEWLGNLTT CCCEEECCHHHHHHHHHCCCC >Mature Secondary Structure AEIVLELEDIQRGVLRPRPAPYAATYVLFRIDDRSAGRELMRRMRSVVDSAKPAGRSAE CEEEEEHHHHHHHHCCCCCCCCEEEEEEEEECCCHHHHHHHHHHHHHHHCCCCCCCCCC DTWVSVALSYQGLKMLGVPQASLDSFSIEFRQGMAARAKSLGDSGESSPEHWEKPLGSTD CCEEEEEEEECCEEEECCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCHHHHHCCCCCCC VHVVITAVAPGVPQLEAAFERARKSYQELNGVAAIWRQDCHVLPGEREAFGFKDGVSHPA EEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHCCCCCCCCCCC IEGSGIPGTNPHEHPLKPGEFVLGYPDEMSEAPQIPQPDVLGRNGSYVVFRKLHQRVAEF CCCCCCCCCCCCCCCCCCCCEEEECCHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHH RRYLKTNAADVAEEEFLAAKMMGRWRSGAPLALCPMHDDPALGVDAQRNNAFVFEDDAIG HHHHHCCHHHHHHHHHHHHHHHHCCCCCCCEEEECCCCCCCCCCCCCCCCEEEEECCCCC YKTPEGSHIRRMNPRDSNVAGVVRIHRMIRRGTSYGPLLPEGVLEDDGVDRGLMFAFVGA CCCCCCCCEEECCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCEEEEEECC HPGRQFEFIQSEWMNDSAFFGGNTGRDPVSGSGDGTGTFDIPTRPIRRRLQGLPRFVVTR CCCCCHHHHHHHCCCCCCEECCCCCCCCCCCCCCCCEEECCCCHHHHHHHHCCCEEEECC GGEYCFMPGLRALEWLGNLTT CCCEEECCHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA