| Definition | Candidatus Solibacter usitatus Ellin6076 chromosome, complete genome. |
|---|---|
| Accession | NC_008536 |
| Length | 9,965,640 |
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The map label for this gene is 116624144
Identifier: 116624144
GI number: 116624144
Start: 6392917
End: 6393852
Strand: Direct
Name: 116624144
Synonym: Acid_5060
Alternate gene names: NA
Gene position: 6392917-6393852 (Clockwise)
Preceding gene: 116624143
Following gene: 116624145
Centisome position: 64.15
GC content: 61.22
Gene sequence:
>936_bases ATGCAACCGGCTCGAAGGACAAAGCCGCATTTGCTGTGGTCTCTCGCGGCCATCTACCCGCTGATAGCCGGACACCCGGC ACAAGCACAGAACCGCGGCGTCTACCCTCTGGGCATGAGCGCAATCAACTCGGGGGTCACACCGGAACCCGGCCTTACGT ATTCGAACCAGTTGCTCTTCTATGTGCGCGACCAGGCCAAGGACGATAATGGCGGAACCCTTCCCATAACAGGCAGCAAT ACCGTCGTGATGGACATGAACACATTGACCTGGGTGAGCACGAAGCGGATTCTCGGAGCGCGGTACTCCGCGTCCGCCAC CCTGCCCTTCGCGAAAAACGATCTGACGTCGGATATCGAGGGCCCAATCAGCGGCGGCAGCGGGTTCGCCGATTCCTACT ACCTGCCATTGATTCTGGGCTGGAGCACGGAGCGCGCCGGCGTCCGGGCCATGTATGGCTTCCTGGCTCCGACCGGCCGG TTCGCACCGGGTGCCGACAGCAACGTGGGCTCCGGGTATTGGACCCACACCCTCTCTTCGGGACAGACATTTTACCTGGC GCGGGAAAAGCGCCTGGTCTTCTCCGCGTTCGAGATGTACGAATTCCACACGACGCAGGAGGGCACCGGTATTCATCCGG GTCAGACCTTCGATCTGGATTACTCGCTGATGGGAGTGCTTCACCGCACGGCTGGCCTGGCCCTTCAGGTGGGCGTCACG GGATACGGGGCACGGCAAACCACGGCAAAGGTTGGGCCCGAAATTACCGCGGAGATGTCGGCGCAGCGCTACGCCGTCAA TGCCTTCGGGTTTGCCGTGAACGCCGCGTTCCCGAAACGAAGAGCAAGCGTCGGCTTCCGCTTCTTCAAGGAGTTCGCCA ACCGCTCGACGTTTCAGGGCTATTCGGCTCAGATTTCGGCGGCGATCCACTTATGA
Upstream 100 bases:
>100_bases GTGCCGGAGACATCCTGCTCGCGGACTCCACGATCTTCACGACGCTGTTTGGAGGTGATGAGAGTCTCGAAACGTTCTGG AAGAATCTCGCGACCAGGTG
Downstream 100 bases:
>100_bases GGATTCAATGGCTGAGATAGTGCTCGAACTGGAAGACATTCAGCGTGGAGTGCTGCGCCCGCGTCCGGCTCCTTATGCGG CAACGTATGTGCTCTTCCGC
Product: phenol degradation MetA-pathway protein
Products: NA
Alternate protein names: Meta-Pathway Phenol Degradation Protein; Phenol Degradation MetA-Pathway Protein; Meta-Pathway Phenol Degradation-Like Protein
Number of amino acids: Translated: 311; Mature: 311
Protein sequence:
>311_residues MQPARRTKPHLLWSLAAIYPLIAGHPAQAQNRGVYPLGMSAINSGVTPEPGLTYSNQLLFYVRDQAKDDNGGTLPITGSN TVVMDMNTLTWVSTKRILGARYSASATLPFAKNDLTSDIEGPISGGSGFADSYYLPLILGWSTERAGVRAMYGFLAPTGR FAPGADSNVGSGYWTHTLSSGQTFYLAREKRLVFSAFEMYEFHTTQEGTGIHPGQTFDLDYSLMGVLHRTAGLALQVGVT GYGARQTTAKVGPEITAEMSAQRYAVNAFGFAVNAAFPKRRASVGFRFFKEFANRSTFQGYSAQISAAIHL
Sequences:
>Translated_311_residues MQPARRTKPHLLWSLAAIYPLIAGHPAQAQNRGVYPLGMSAINSGVTPEPGLTYSNQLLFYVRDQAKDDNGGTLPITGSN TVVMDMNTLTWVSTKRILGARYSASATLPFAKNDLTSDIEGPISGGSGFADSYYLPLILGWSTERAGVRAMYGFLAPTGR FAPGADSNVGSGYWTHTLSSGQTFYLAREKRLVFSAFEMYEFHTTQEGTGIHPGQTFDLDYSLMGVLHRTAGLALQVGVT GYGARQTTAKVGPEITAEMSAQRYAVNAFGFAVNAAFPKRRASVGFRFFKEFANRSTFQGYSAQISAAIHL >Mature_311_residues MQPARRTKPHLLWSLAAIYPLIAGHPAQAQNRGVYPLGMSAINSGVTPEPGLTYSNQLLFYVRDQAKDDNGGTLPITGSN TVVMDMNTLTWVSTKRILGARYSASATLPFAKNDLTSDIEGPISGGSGFADSYYLPLILGWSTERAGVRAMYGFLAPTGR FAPGADSNVGSGYWTHTLSSGQTFYLAREKRLVFSAFEMYEFHTTQEGTGIHPGQTFDLDYSLMGVLHRTAGLALQVGVT GYGARQTTAKVGPEITAEMSAQRYAVNAFGFAVNAAFPKRRASVGFRFFKEFANRSTFQGYSAQISAAIHL
Specific function: Unknown
COG id: COG4313
COG function: function code C; Protein involved in meta-pathway of phenol degradation
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 33669; Mature: 33669
Theoretical pI: Translated: 9.72; Mature: 9.72
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQPARRTKPHLLWSLAAIYPLIAGHPAQAQNRGVYPLGMSAINSGVTPEPGLTYSNQLLF CCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCEECHHHHCCCCCCCCCCCCCCEEEE YVRDQAKDDNGGTLPITGSNTVVMDMNTLTWVSTKRILGARYSASATLPFAKNDLTSDIE EEECCCCCCCCCEEEEECCCEEEEECCCEEEEHHHHHHCCCCCCCEECCCCCCCCCCCCC GPISGGSGFADSYYLPLILGWSTERAGVRAMYGFLAPTGRFAPGADSNVGSGYWTHTLSS CCCCCCCCCCCCEEEEEEEECCCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCEEEEEECC GQTFYLAREKRLVFSAFEMYEFHTTQEGTGIHPGQTFDLDYSLMGVLHRTAGLALQVGVT CCEEEEEECCHHHHHHHHHHHEECCCCCCCCCCCCEEECCHHHHHHHHHHCCEEEEEECC GYGARQTTAKVGPEITAEMSAQRYAVNAFGFAVNAAFPKRRASVGFRFFKEFANRSTFQG CCCCCCCHHHCCCCHHHHHCHHHEEEEEHEEEEECCCCHHHHHHHHHHHHHHHCCCCCCC YSAQISAAIHL CCEEEEEEEEC >Mature Secondary Structure MQPARRTKPHLLWSLAAIYPLIAGHPAQAQNRGVYPLGMSAINSGVTPEPGLTYSNQLLF CCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCEECHHHHCCCCCCCCCCCCCCEEEE YVRDQAKDDNGGTLPITGSNTVVMDMNTLTWVSTKRILGARYSASATLPFAKNDLTSDIE EEECCCCCCCCCEEEEECCCEEEEECCCEEEEHHHHHHCCCCCCCEECCCCCCCCCCCCC GPISGGSGFADSYYLPLILGWSTERAGVRAMYGFLAPTGRFAPGADSNVGSGYWTHTLSS CCCCCCCCCCCCEEEEEEEECCCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCEEEEEECC GQTFYLAREKRLVFSAFEMYEFHTTQEGTGIHPGQTFDLDYSLMGVLHRTAGLALQVGVT CCEEEEEECCHHHHHHHHHHHEECCCCCCCCCCCCEEECCHHHHHHHHHHCCEEEEEECC GYGARQTTAKVGPEITAEMSAQRYAVNAFGFAVNAAFPKRRASVGFRFFKEFANRSTFQG CCCCCCCHHHCCCCHHHHHCHHHEEEEEHEEEEECCCCHHHHHHHHHHHHHHHCCCCCCC YSAQISAAIHL CCEEEEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA