| Definition | Candidatus Solibacter usitatus Ellin6076 chromosome, complete genome. |
|---|---|
| Accession | NC_008536 |
| Length | 9,965,640 |
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The map label for this gene is pyk [H]
Identifier: 116624087
GI number: 116624087
Start: 6308616
End: 6310028
Strand: Reverse
Name: pyk [H]
Synonym: Acid_5001
Alternate gene names: 116624087
Gene position: 6310028-6308616 (Counterclockwise)
Preceding gene: 116624088
Following gene: 116624085
Centisome position: 63.32
GC content: 62.7
Gene sequence:
>1413_bases ATGCCAAATACAAAAATTGTAGCCACACTTGGGCCGGCCACAGATGCGCCCGGTGTCTTGCGTCAACTGCTCGCCGCAGG CGTCGATGTTTTTCGACTGAATGCATCGCACGGAGCACAGGATGCGCATGCCGCGCGGATCGACGCGGTGCGAGCTGCGG CGCGCGAGGCGCACGTTCACGCCGGGATTCTGCTGGATTTGCAGGGGCCGAAGATCCGGCTCGGGCGCTTTGAAAATGGC GGAGTGACGCTGGTGACCGACGCCATATTTACGATCACGACAGAGCAGGTGATGGGCACCTCCGAGCGCGCATCGACGGG CTATTCGCGGTTCGCGAAGGACGTGAAGGCGGGCGATCGCATTCTGCTCGCCGATGGCATCATCGAACTGATCGCGCTCG AATCGGACGGTGTCAGTGTGCAAACCCGTATCGTGAACGGCGGTCCGATCGGCGACCACAAGGGGATCAATCTTCCGGGG GTGCAGGTGAGCATTCCCTCTCTGACCGAGAAGGACCTGGCCGATCTGCATTTTGGATTGAACGCCGGAGTCGATATCGT GGCGCTTTCGTTTGTGCGCACGGCGGACGATGTGCGGCAGTTGCGCGACCGGCTCGGGGGGCGGCCGGTCTCGATTGTCG CCAAGATCGAAAAGCCGGAGGGCTACGAGAATATCGAGCCGATTCTGGATGTGACGGATGGCGTGATGGTGGCGCGCGGG GACCTGGGCGTAGAGATTTCGCTGGAGCGTGTGCCGCGAATTCAGAAATCGATCATCCGGCGCGCGCGGCGCAAGGGTCG GTTCGTGATTACGGCGACGCAGATGCTGGAATCCATGATCGAGAATCCACGGCCCACACGGGCCGAGGTGAGCGATGTCG CCAATGCGATTTACGATGGCACGGACGCGGTGATGCTGTCGGCGGAGACGTCGGTCGGCAAGTATCCGGTGGAAGCCGTG CGCTACATGGCGAAGATCGCGGCGGAGAGCGAGGATTCGATTCGCAAGAAGGGATATATCGACCCGCCTCACCAACCGCA GCCATCGAACGCGGAGATCCTGGCGGATGCGGCGCATCACGCCGCGCGCGATTCGGGGGCGGCGGCGATCGTGGTGTTCA GTTCGCGCGGATCTAGTGCGCGGCTGGTATCGCGGTACCGTCCGCCGGTAGGGGTGTTCGCGATCACGCCGCACGATACT ACGGCGCGGCAACTCTCCGTCAGTTACGGCGTGACCCCGCTGCTGGCGCCGGATGTCTCGAGCACGGATGAAATGTTGAG CCAGATGGACCGCGTGCTCATTGAAGGCGGGTATCTGCAGAAGGGGCAGCTGGTGGTGTTTGTCGCAGGTCAGCCGGTGG GGCGGCCCGGAACGACGAACCTGATGAAGCTGCATCGCGTGGGTCTGGGATAG
Upstream 100 bases:
>100_bases CGATTCAGCAAGCAGTCGCACGACTCGATGTCAAACCGGCGAAAGTACCTCCGCGTCTGGCCCCGCATATGGCCCCCCAT CTGGCAAGATAGTCGGAGGG
Downstream 100 bases:
>100_bases AGGAACAGACTAGGGGAAACTGACGAGAACGGAGTTGGTGCGTTGGGTATCGACGGTCAGGGTGACGAAGACATCGCCTT TTGCGGCGAGGGTTCGCGGG
Product: pyruvate kinase
Products: NA
Alternate protein names: PK [H]
Number of amino acids: Translated: 470; Mature: 469
Protein sequence:
>470_residues MPNTKIVATLGPATDAPGVLRQLLAAGVDVFRLNASHGAQDAHAARIDAVRAAAREAHVHAGILLDLQGPKIRLGRFENG GVTLVTDAIFTITTEQVMGTSERASTGYSRFAKDVKAGDRILLADGIIELIALESDGVSVQTRIVNGGPIGDHKGINLPG VQVSIPSLTEKDLADLHFGLNAGVDIVALSFVRTADDVRQLRDRLGGRPVSIVAKIEKPEGYENIEPILDVTDGVMVARG DLGVEISLERVPRIQKSIIRRARRKGRFVITATQMLESMIENPRPTRAEVSDVANAIYDGTDAVMLSAETSVGKYPVEAV RYMAKIAAESEDSIRKKGYIDPPHQPQPSNAEILADAAHHAARDSGAAAIVVFSSRGSSARLVSRYRPPVGVFAITPHDT TARQLSVSYGVTPLLAPDVSSTDEMLSQMDRVLIEGGYLQKGQLVVFVAGQPVGRPGTTNLMKLHRVGLG
Sequences:
>Translated_470_residues MPNTKIVATLGPATDAPGVLRQLLAAGVDVFRLNASHGAQDAHAARIDAVRAAAREAHVHAGILLDLQGPKIRLGRFENG GVTLVTDAIFTITTEQVMGTSERASTGYSRFAKDVKAGDRILLADGIIELIALESDGVSVQTRIVNGGPIGDHKGINLPG VQVSIPSLTEKDLADLHFGLNAGVDIVALSFVRTADDVRQLRDRLGGRPVSIVAKIEKPEGYENIEPILDVTDGVMVARG DLGVEISLERVPRIQKSIIRRARRKGRFVITATQMLESMIENPRPTRAEVSDVANAIYDGTDAVMLSAETSVGKYPVEAV RYMAKIAAESEDSIRKKGYIDPPHQPQPSNAEILADAAHHAARDSGAAAIVVFSSRGSSARLVSRYRPPVGVFAITPHDT TARQLSVSYGVTPLLAPDVSSTDEMLSQMDRVLIEGGYLQKGQLVVFVAGQPVGRPGTTNLMKLHRVGLG >Mature_469_residues PNTKIVATLGPATDAPGVLRQLLAAGVDVFRLNASHGAQDAHAARIDAVRAAAREAHVHAGILLDLQGPKIRLGRFENGG VTLVTDAIFTITTEQVMGTSERASTGYSRFAKDVKAGDRILLADGIIELIALESDGVSVQTRIVNGGPIGDHKGINLPGV QVSIPSLTEKDLADLHFGLNAGVDIVALSFVRTADDVRQLRDRLGGRPVSIVAKIEKPEGYENIEPILDVTDGVMVARGD LGVEISLERVPRIQKSIIRRARRKGRFVITATQMLESMIENPRPTRAEVSDVANAIYDGTDAVMLSAETSVGKYPVEAVR YMAKIAAESEDSIRKKGYIDPPHQPQPSNAEILADAAHHAARDSGAAAIVVFSSRGSSARLVSRYRPPVGVFAITPHDTT ARQLSVSYGVTPLLAPDVSSTDEMLSQMDRVLIEGGYLQKGQLVVFVAGQPVGRPGTTNLMKLHRVGLG
Specific function: Glycolysis; final step. [C]
COG id: COG0469
COG function: function code G; Pyruvate kinase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: In the C-terminal section; belongs to the PEP- utilizing enzyme family [H]
Homologues:
Organism=Homo sapiens, GI32967597, Length=487, Percent_Identity=41.0677618069815, Blast_Score=322, Evalue=4e-88, Organism=Homo sapiens, GI10835121, Length=487, Percent_Identity=41.0677618069815, Blast_Score=322, Evalue=4e-88, Organism=Homo sapiens, GI33286418, Length=490, Percent_Identity=39.1836734693878, Blast_Score=305, Evalue=7e-83, Organism=Homo sapiens, GI33286422, Length=490, Percent_Identity=38.5714285714286, Blast_Score=304, Evalue=1e-82, Organism=Homo sapiens, GI33286420, Length=490, Percent_Identity=38.5714285714286, Blast_Score=304, Evalue=1e-82, Organism=Homo sapiens, GI310128732, Length=289, Percent_Identity=39.1003460207612, Blast_Score=184, Evalue=2e-46, Organism=Homo sapiens, GI310128730, Length=289, Percent_Identity=39.1003460207612, Blast_Score=184, Evalue=2e-46, Organism=Homo sapiens, GI310128736, Length=236, Percent_Identity=36.864406779661, Blast_Score=141, Evalue=2e-33, Organism=Homo sapiens, GI310128734, Length=236, Percent_Identity=36.864406779661, Blast_Score=141, Evalue=2e-33, Organism=Homo sapiens, GI310128738, Length=216, Percent_Identity=36.5740740740741, Blast_Score=123, Evalue=4e-28, Organism=Escherichia coli, GI1787965, Length=470, Percent_Identity=42.9787234042553, Blast_Score=359, Evalue=1e-100, Organism=Escherichia coli, GI1788160, Length=476, Percent_Identity=41.8067226890756, Blast_Score=300, Evalue=2e-82, Organism=Caenorhabditis elegans, GI17544584, Length=478, Percent_Identity=39.9581589958159, Blast_Score=325, Evalue=3e-89, Organism=Caenorhabditis elegans, GI17506829, Length=485, Percent_Identity=39.1752577319588, Blast_Score=284, Evalue=6e-77, Organism=Caenorhabditis elegans, GI71984413, Length=485, Percent_Identity=39.1752577319588, Blast_Score=284, Evalue=6e-77, Organism=Caenorhabditis elegans, GI71984406, Length=485, Percent_Identity=39.1752577319588, Blast_Score=284, Evalue=7e-77, Organism=Caenorhabditis elegans, GI17506831, Length=484, Percent_Identity=39.2561983471074, Blast_Score=284, Evalue=8e-77, Organism=Saccharomyces cerevisiae, GI6319279, Length=484, Percent_Identity=39.4628099173554, Blast_Score=292, Evalue=7e-80, Organism=Saccharomyces cerevisiae, GI6324923, Length=489, Percent_Identity=38.8548057259714, Blast_Score=283, Evalue=5e-77, Organism=Drosophila melanogaster, GI28571814, Length=490, Percent_Identity=38.3673469387755, Blast_Score=305, Evalue=3e-83, Organism=Drosophila melanogaster, GI24648964, Length=490, Percent_Identity=38.3673469387755, Blast_Score=305, Evalue=3e-83, Organism=Drosophila melanogaster, GI24648966, Length=415, Percent_Identity=41.6867469879518, Blast_Score=290, Evalue=2e-78, Organism=Drosophila melanogaster, GI24581235, Length=484, Percent_Identity=30.9917355371901, Blast_Score=229, Evalue=3e-60, Organism=Drosophila melanogaster, GI24646914, Length=286, Percent_Identity=41.2587412587413, Blast_Score=189, Evalue=2e-48,
Paralogues:
None
Copy number: 500 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 124 Molecules/Cell In: Growth Phase, Glucose-minimal MOPS Media. [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR008279 - InterPro: IPR001697 - InterPro: IPR015813 - InterPro: IPR011037 - InterPro: IPR015794 - InterPro: IPR018209 - InterPro: IPR015793 - InterPro: IPR015795 - InterPro: IPR015806 [H]
Pfam domain/function: PF00391 PEP-utilizers; PF00224 PK; PF02887 PK_C [H]
EC number: =2.7.1.40 [H]
Molecular weight: Translated: 50148; Mature: 50017
Theoretical pI: Translated: 7.46; Mature: 7.46
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 2.1 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 1.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPNTKIVATLGPATDAPGVLRQLLAAGVDVFRLNASHGAQDAHAARIDAVRAAAREAHVH CCCCEEEEEECCCCCCHHHHHHHHHCCCEEEEEECCCCCCCHHHHHHHHHHHHHHHHHEE AGILLDLQGPKIRLGRFENGGVTLVTDAIFTITTEQVMGTSERASTGYSRFAKDVKAGDR EEEEEEECCCEEEEEEECCCCEEEEEEEEEEEEHHHHHCCCHHHHCCHHHHHHHHHCCCE ILLADGIIELIALESDGVSVQTRIVNGGPIGDHKGINLPGVQVSIPSLTEKDLADLHFGL EEEECCCEEEEEECCCCCEEEEEEECCCCCCCCCCCCCCCCEEECCCCCHHHHHHHHCCC NAGVDIVALSFVRTADDVRQLRDRLGGRPVSIVAKIEKPEGYENIEPILDVTDGVMVARG CCCHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEEECCCCCCCCCHHHCCCCCEEEEEC DLGVEISLERVPRIQKSIIRRARRKGRFVITATQMLESMIENPRPTRAEVSDVANAIYDG CCCEEEEHHHCCHHHHHHHHHHHHCCCEEEEHHHHHHHHHCCCCCCHHHHHHHHHHHHCC TDAVMLSAETSVGKYPVEAVRYMAKIAAESEDSIRKKGYIDPPHQPQPSNAEILADAAHH CCEEEEEECCCCCCCCHHHHHHHHHHHCCCHHHHHHCCCCCCCCCCCCCCHHHHHHHHHH AARDSGAAAIVVFSSRGSSARLVSRYRPPVGVFAITPHDTTARQLSVSYGVTPLLAPDVS HHCCCCCEEEEEEECCCCCHHHHHHCCCCEEEEEECCCCCCHHEEEEECCCCEEECCCCC STDEMLSQMDRVLIEGGYLQKGQLVVFVAGQPVGRPGTTNLMKLHRVGLG CHHHHHHHHHHHHHCCCCEECCCEEEEECCCCCCCCCCCHHHHHHHCCCC >Mature Secondary Structure PNTKIVATLGPATDAPGVLRQLLAAGVDVFRLNASHGAQDAHAARIDAVRAAAREAHVH CCCEEEEEECCCCCCHHHHHHHHHCCCEEEEEECCCCCCCHHHHHHHHHHHHHHHHHEE AGILLDLQGPKIRLGRFENGGVTLVTDAIFTITTEQVMGTSERASTGYSRFAKDVKAGDR EEEEEEECCCEEEEEEECCCCEEEEEEEEEEEEHHHHHCCCHHHHCCHHHHHHHHHCCCE ILLADGIIELIALESDGVSVQTRIVNGGPIGDHKGINLPGVQVSIPSLTEKDLADLHFGL EEEECCCEEEEEECCCCCEEEEEEECCCCCCCCCCCCCCCCEEECCCCCHHHHHHHHCCC NAGVDIVALSFVRTADDVRQLRDRLGGRPVSIVAKIEKPEGYENIEPILDVTDGVMVARG CCCHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEEECCCCCCCCCHHHCCCCCEEEEEC DLGVEISLERVPRIQKSIIRRARRKGRFVITATQMLESMIENPRPTRAEVSDVANAIYDG CCCEEEEHHHCCHHHHHHHHHHHHCCCEEEEHHHHHHHHHCCCCCCHHHHHHHHHHHHCC TDAVMLSAETSVGKYPVEAVRYMAKIAAESEDSIRKKGYIDPPHQPQPSNAEILADAAHH CCEEEEEECCCCCCCCHHHHHHHHHHHCCCHHHHHHCCCCCCCCCCCCCCHHHHHHHHHH AARDSGAAAIVVFSSRGSSARLVSRYRPPVGVFAITPHDTTARQLSVSYGVTPLLAPDVS HHCCCCCEEEEEEECCCCCHHHHHHCCCCEEEEEECCCCCCHHEEEEECCCCEEECCCCC STDEMLSQMDRVLIEGGYLQKGQLVVFVAGQPVGRPGTTNLMKLHRVGLG CHHHHHHHHHHHHHCCCCEECCCEEEEECCCCCCCCCCCHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 7549104 [H]