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The map label for this gene is tolB [H]

Identifier: 116624085

GI number: 116624085

Start: 6304988

End: 6306721

Strand: Reverse

Name: tolB [H]

Synonym: Acid_4999

Alternate gene names: 116624085

Gene position: 6306721-6304988 (Counterclockwise)

Preceding gene: 116624087

Following gene: 116624078

Centisome position: 63.28

GC content: 63.78

Gene sequence:

>1734_bases
ATGGCATCTGGGAGTATTTTCCGCCGGCCGGCTGTGATGTTGGCGCTCGCGCTGTGTTCGGTCGGCGCGGTAGTGACGTT
GATGGGGCGACTGGCCACGGGGCCGCAGGTGGCACAGAAGAAGGTCCAGATCTCGACGGGGGACGCGTCGGAGAGCTATC
CGTCGATTTCGCCGGACGGCAAGCGGCTGGCGTATAGCGCGCGGGAGAGTTCCAAAGTCAGCGCGTTTCACGTCTTCGTG
CGGGAACTGCCCTCGGGCAAACCGCTGCAATTGACCAAGGGCGAGGGCAACGACATCGCCCCGGTATGGTCGCCGGACGG
AGGGACGCTGGCGTTTGTGCGGGTGGAGGACGGCAAGCGGGAATGCATCGTGATGCCGGCCGATGGCGGCGACGAGCGGA
AGATCGCGGAACTGGGCGCGGCGGCGGATTCGACGCAACCGGCGCCGGAAGTCTCCTGGAAACCCGACAGCAAGTCGCTG
GTAGTGGTGCAGAACGGCGAGAAGCAACTCCCCGGCCTGGCGACCCTGACGCTGGATGGAAAACTTCAGCGCATCACCAA
TCCCGGGGAAGGAACAGAGGGCGATTCCACACCCGCAGTGGCGGCGAGCGGAAGCAGCATCGCGTTTGTGCGGCACACGC
AAAACGATGGAGCCGACATTTTTCTCTGCGACGCGACCGGCGGTGGAGTTCGGCGGCTGACGTTCGACGATCGTGGGATT
CGCGGGATTGCGTGGAGCCACGATGGGCAGGACCTGATCTATTCTGCCAACCGCGCCGGCGGATGGCGCATCTGGCGGGT
GCCGGCGTACGGCGGCAGTCCGCGCGAGTACACGCTCGGCGGAAAGCAGGCCTACTATCCGACGGTGGGGCGCAACCGGC
TGGCGTACACGGACAGTCCGACGGTGTCGGCGATCTGGCGGGCGACGCTGGGCGGAGGCCCCGATGCGGTGGAAGAGCGT
GCGCTGCTGCGGTCCACGGGGCGCGAATCGATGCCGGTGTGGTCGCCGGACGGGACGCGGGTCGCGGACGTGAGCGACCA
GACCGGATCCGAGGAAATCTTCGTGAGCGACGCCAACGGCCAGGATCGCGTCCAGATCACGCAGTTCAAGGGACCACGCG
TGAAGAGTGTGCGGTGGTCGCCGGACAGCAAGGGACTGATCTTCGACCTTTCCACGGATCACGGGTGGGAAGTCTTCGCT
GTGCCGGCCACGGCGGGGCAGAAGCCGGTCCGCGTGCTACTGAATGCGAACAACGCTTCGTACTCGCACGACGGAAAGAC
GATTTACTTTCAATCGCGCGGGGAGATTTGGAAGGCAACGGCGGCGGGCGGAAATCCGCAAACGCTGGCGAAGGATCGTG
GCGGGGCGCAACCGGTGGAATCGGCGGATGGGAAGTACGTGTATTATCGTGCGCGCCGCAGCATCTTTCGGGTGCCGGTG
GCAGGCGGCGAGGGCGAAGAAGCGATTGTTCCGGAACACGACCTCTCGTTTTCGACCACGATTCAGCCCGTCAAAAAGGG
CGTCTACTACGCGGAGTTCGAGCGCAGCGCGCGGGGGACGGCGGTGTCGTTTTACGATTTCACGACGAAGAAGAGCACAG
TGGCGTTCCGGATGAAGAACACGGACTTCTGGAATGGCGCGGCCTTTTCGGTATCGCCGGACGGCAAATATTTGTTATAT
CCGCGAGTGGACCAGAGTCAGACGAATTTGATTCTGGTAGAGAATTTTCGGTAG

Upstream 100 bases:

>100_bases
CATGGCAAAGAAGACTTACGAGTCTTATTTTAACTCCGGGAACAAACGGTGGCGCGGGTTCGTCTTTCTAGTGACGCATC
CTGCGATAATCGGGAACGAT

Downstream 100 bases:

>100_bases
GCTCAGGCTGCGGCGAGCCAGAAGCTTTCCGTCCATGAGGCAGCCGGCGGGATCGATTGAAGACCTTTGTAAAGGCCTGC
GTGAGCCAGATTGAAGGCAT

Product: peptidase S9B dipeptidylpeptidase IV subunit

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 577; Mature: 576

Protein sequence:

>577_residues
MASGSIFRRPAVMLALALCSVGAVVTLMGRLATGPQVAQKKVQISTGDASESYPSISPDGKRLAYSARESSKVSAFHVFV
RELPSGKPLQLTKGEGNDIAPVWSPDGGTLAFVRVEDGKRECIVMPADGGDERKIAELGAAADSTQPAPEVSWKPDSKSL
VVVQNGEKQLPGLATLTLDGKLQRITNPGEGTEGDSTPAVAASGSSIAFVRHTQNDGADIFLCDATGGGVRRLTFDDRGI
RGIAWSHDGQDLIYSANRAGGWRIWRVPAYGGSPREYTLGGKQAYYPTVGRNRLAYTDSPTVSAIWRATLGGGPDAVEER
ALLRSTGRESMPVWSPDGTRVADVSDQTGSEEIFVSDANGQDRVQITQFKGPRVKSVRWSPDSKGLIFDLSTDHGWEVFA
VPATAGQKPVRVLLNANNASYSHDGKTIYFQSRGEIWKATAAGGNPQTLAKDRGGAQPVESADGKYVYYRARRSIFRVPV
AGGEGEEAIVPEHDLSFSTTIQPVKKGVYYAEFERSARGTAVSFYDFTTKKSTVAFRMKNTDFWNGAAFSVSPDGKYLLY
PRVDQSQTNLILVENFR

Sequences:

>Translated_577_residues
MASGSIFRRPAVMLALALCSVGAVVTLMGRLATGPQVAQKKVQISTGDASESYPSISPDGKRLAYSARESSKVSAFHVFV
RELPSGKPLQLTKGEGNDIAPVWSPDGGTLAFVRVEDGKRECIVMPADGGDERKIAELGAAADSTQPAPEVSWKPDSKSL
VVVQNGEKQLPGLATLTLDGKLQRITNPGEGTEGDSTPAVAASGSSIAFVRHTQNDGADIFLCDATGGGVRRLTFDDRGI
RGIAWSHDGQDLIYSANRAGGWRIWRVPAYGGSPREYTLGGKQAYYPTVGRNRLAYTDSPTVSAIWRATLGGGPDAVEER
ALLRSTGRESMPVWSPDGTRVADVSDQTGSEEIFVSDANGQDRVQITQFKGPRVKSVRWSPDSKGLIFDLSTDHGWEVFA
VPATAGQKPVRVLLNANNASYSHDGKTIYFQSRGEIWKATAAGGNPQTLAKDRGGAQPVESADGKYVYYRARRSIFRVPV
AGGEGEEAIVPEHDLSFSTTIQPVKKGVYYAEFERSARGTAVSFYDFTTKKSTVAFRMKNTDFWNGAAFSVSPDGKYLLY
PRVDQSQTNLILVENFR
>Mature_576_residues
ASGSIFRRPAVMLALALCSVGAVVTLMGRLATGPQVAQKKVQISTGDASESYPSISPDGKRLAYSARESSKVSAFHVFVR
ELPSGKPLQLTKGEGNDIAPVWSPDGGTLAFVRVEDGKRECIVMPADGGDERKIAELGAAADSTQPAPEVSWKPDSKSLV
VVQNGEKQLPGLATLTLDGKLQRITNPGEGTEGDSTPAVAASGSSIAFVRHTQNDGADIFLCDATGGGVRRLTFDDRGIR
GIAWSHDGQDLIYSANRAGGWRIWRVPAYGGSPREYTLGGKQAYYPTVGRNRLAYTDSPTVSAIWRATLGGGPDAVEERA
LLRSTGRESMPVWSPDGTRVADVSDQTGSEEIFVSDANGQDRVQITQFKGPRVKSVRWSPDSKGLIFDLSTDHGWEVFAV
PATAGQKPVRVLLNANNASYSHDGKTIYFQSRGEIWKATAAGGNPQTLAKDRGGAQPVESADGKYVYYRARRSIFRVPVA
GGEGEEAIVPEHDLSFSTTIQPVKKGVYYAEFERSARGTAVSFYDFTTKKSTVAFRMKNTDFWNGAAFSVSPDGKYLLYP
RVDQSQTNLILVENFR

Specific function: Involved in the tonB-independent uptake of proteins [H]

COG id: COG0823

COG function: function code U; Periplasmic component of the Tol biopolymer transport system

Gene ontology:

Cell location: Periplasm (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the tolB family [H]

Homologues:

Organism=Escherichia coli, GI1786961, Length=205, Percent_Identity=28.780487804878, Blast_Score=65, Evalue=9e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011659
- InterPro:   IPR014167
- InterPro:   IPR007195
- InterPro:   IPR015943 [H]

Pfam domain/function: PF07676 PD40; PF04052 TolB_N [H]

EC number: NA

Molecular weight: Translated: 62191; Mature: 62060

Theoretical pI: Translated: 8.86; Mature: 8.86

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
1.0 %Met     (Translated Protein)
1.6 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
0.9 %Met     (Mature Protein)
1.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MASGSIFRRPAVMLALALCSVGAVVTLMGRLATGPQVAQKKVQISTGDASESYPSISPDG
CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHEEEEEECCCCCCCCCCCCCCC
KRLAYSARESSKVSAFHVFVRELPSGKPLQLTKGEGNDIAPVWSPDGGTLAFVRVEDGKR
CEEEEECCCCCCHHHEEEEHHHCCCCCCEEEECCCCCCCCEEECCCCCEEEEEEECCCCC
ECIVMPADGGDERKIAELGAAADSTQPAPEVSWKPDSKSLVVVQNGEKQLPGLATLTLDG
EEEEEECCCCCCHHHHHHCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCEEEEEECC
KLQRITNPGEGTEGDSTPAVAASGSSIAFVRHTQNDGADIFLCDATGGGVRRLTFDDRGI
EEEECCCCCCCCCCCCCCEEEECCCEEEEEEECCCCCCEEEEEECCCCCEEEEEECCCCC
RGIAWSHDGQDLIYSANRAGGWRIWRVPAYGGSPREYTLGGKQAYYPTVGRNRLAYTDSP
EEEEECCCCCEEEEECCCCCCEEEEEEECCCCCCCEEEECCCEEECCCCCCCEEEECCCC
TVSAIWRATLGGGPDAVEERALLRSTGRESMPVWSPDGTRVADVSDQTGSEEIFVSDANG
CEEEEEEECCCCCHHHHHHHHHHHHCCCCCCCEECCCCCEEEECCCCCCCCEEEEECCCC
QDRVQITQFKGPRVKSVRWSPDSKGLIFDLSTDHGWEVFAVPATAGQKPVRVLLNANNAS
CCCEEEEEECCCCEEEEEECCCCCCEEEEECCCCCEEEEEECCCCCCCCEEEEEECCCCC
YSHDGKTIYFQSRGEIWKATAAGGNPQTLAKDRGGAQPVESADGKYVYYRARRSIFRVPV
CCCCCCEEEECCCCCEEEEEECCCCCHHHHHCCCCCCCCCCCCCCEEEEEECCCEEEEEE
AGGEGEEAIVPEHDLSFSTTIQPVKKGVYYAEFERSARGTAVSFYDFTTKKSTVAFRMKN
CCCCCCCCCCCCCCCCCCCCHHHHHCCCEEEEHHCCCCCCEEEEEEECCCCCEEEEEEEC
TDFWNGAAFSVSPDGKYLLYPRVDQSQTNLILVENFR
CCCCCCEEEEECCCCCEEEEECCCCCCCCEEEEECCC
>Mature Secondary Structure 
ASGSIFRRPAVMLALALCSVGAVVTLMGRLATGPQVAQKKVQISTGDASESYPSISPDG
CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHEEEEEECCCCCCCCCCCCCCC
KRLAYSARESSKVSAFHVFVRELPSGKPLQLTKGEGNDIAPVWSPDGGTLAFVRVEDGKR
CEEEEECCCCCCHHHEEEEHHHCCCCCCEEEECCCCCCCCEEECCCCCEEEEEEECCCCC
ECIVMPADGGDERKIAELGAAADSTQPAPEVSWKPDSKSLVVVQNGEKQLPGLATLTLDG
EEEEEECCCCCCHHHHHHCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCEEEEEECC
KLQRITNPGEGTEGDSTPAVAASGSSIAFVRHTQNDGADIFLCDATGGGVRRLTFDDRGI
EEEECCCCCCCCCCCCCCEEEECCCEEEEEEECCCCCCEEEEEECCCCCEEEEEECCCCC
RGIAWSHDGQDLIYSANRAGGWRIWRVPAYGGSPREYTLGGKQAYYPTVGRNRLAYTDSP
EEEEECCCCCEEEEECCCCCCEEEEEEECCCCCCCEEEECCCEEECCCCCCCEEEECCCC
TVSAIWRATLGGGPDAVEERALLRSTGRESMPVWSPDGTRVADVSDQTGSEEIFVSDANG
CEEEEEEECCCCCHHHHHHHHHHHHCCCCCCCEECCCCCEEEECCCCCCCCEEEEECCCC
QDRVQITQFKGPRVKSVRWSPDSKGLIFDLSTDHGWEVFAVPATAGQKPVRVLLNANNAS
CCCEEEEEECCCCEEEEEECCCCCCEEEEECCCCCEEEEEECCCCCCCCEEEEEECCCCC
YSHDGKTIYFQSRGEIWKATAAGGNPQTLAKDRGGAQPVESADGKYVYYRARRSIFRVPV
CCCCCCEEEECCCCCEEEEEECCCCCHHHHHCCCCCCCCCCCCCCEEEEEECCCEEEEEE
AGGEGEEAIVPEHDLSFSTTIQPVKKGVYYAEFERSARGTAVSFYDFTTKKSTVAFRMKN
CCCCCCCCCCCCCCCCCCCCHHHHHCCCEEEEHHCCCCCCEEEEEEECCCCCEEEEEEEC
TDFWNGAAFSVSPDGKYLLYPRVDQSQTNLILVENFR
CCCCCCEEEEECCCCCEEEEECCCCCCCCEEEEECCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA