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The map label for this gene is 116623839

Identifier: 116623839

GI number: 116623839

Start: 6010210

End: 6011520

Strand: Reverse

Name: 116623839

Synonym: Acid_4751

Alternate gene names: NA

Gene position: 6011520-6010210 (Counterclockwise)

Preceding gene: 116623840

Following gene: 116623834

Centisome position: 60.32

GC content: 60.79

Gene sequence:

>1311_bases
ATGTGCCATGAGGCCATCTCGTTTTGCTCCTGCCGCAACCGGCGCAGCAAAGAACTGCTGCCGACCAGCTACGTGCATGT
CGTCTTCACCATCCCCCACGAGCTTTCGTGGCTGGCGTTGCAGAATAAGAAAGTCGTCTATGACCTCTTGTTCCGCACCA
GCGCCGCGACCCTGTTGGAGGTTGCCGCCGATCCGAAACATCTCGGCGCGGAGATCGGCTTCCTCAGTGTGCTCCACACC
TGGGGCCAGACCCTACAACATCATCCGCACATCCATTGCGTGATCCCTTCCGGTGGCCTGTCGCCCGATCACCAACACTG
GGTTCACCCGCGTTACCCGTTCTTCCTGCCGGTGCCGGTACTCCGTCGCGTCTTTCGTGGCAAGTTCGTCGCCGGCCTGA
AGTCCGCCTTCCATCAAGGCAAACTCGTATTCCCCGGCAGCCTCCAGCCAATGGCCGCGGAGAAGTCCTTTGCCAAGTTC
CTGCGACCGCTCTTTCGTAAGGAGTGGGTGGTCTACGCCAAGCGGCCCTTCGGCGGACCGGAACACGTGCTCCACTACCT
GGCACGCTACACACACCGCGTCGCCATTTCCAACCACCGACTCCTGTCCGTGGCTGACGGCAAGGTCACTTTCCGCTGGA
AGGACTACGCTCAGGGCAGCAAGCAACGCAAGATGACGGTCACCGCCGAAGAGTTCCTGCGGCGATTCATGCTCCACGTC
CTACCGCTCGGGTTTATCCGGATACGCTTTTCCGGCTTTCTCGCCAATCGACACAGGAAGCAACTGCTACCGCTCTGCCA
GACCTTGCTGGGAGCCAGGACAACACAACCATCAGAGTCCCTCGGAAGTAGCGAGACCAAGCCCCTGGCAGCTTGGCGTT
GCCTTGTTGTGGTGGCGACATGGTCTTCGTCGAGAAACTTACTGCTCAACAGATCCGACGGAGGTCTGTTGACCGGAAGC
ATCTCGTTGACAGTTCGTAGCCGGCATTCACTCTCGGACCTTGAGCGTGCTTCCACACGTGCGTTCCACGTGTGCCCGTA
TCGGCGGCAACGCGTCCTACGTGGCGGAAAACGCGGCCCATCCCCCCTGCCAACCCATCCCTACCGTCGTTCTCGCCGAA
GGACAACGACATCCTCCCCAGCGTTGCCTGCGAATCGCAGCTCCCCAATGCTCCAAACCCCATTCAATACCCATAGGTGC
CGCGTCCGCCGCAGACGCCAGCGGCCTAGTTCAAACGCCTCAATCGAAAGTGCCCCGGCCCGAAGTTCTCGGCCGTGGAC
AGGGCTACCACGCCGGGGCACTCCCGATTGA

Upstream 100 bases:

>100_bases
AGCACCGGTCCTGGTTGACGTGGCTTCATCTCCGCGTCCTTTACGCCATCGAGTTTTGCCGAACGGCAACACTCGGTGGC
CACCTCGACCGCTGTTCCCG

Downstream 100 bases:

>100_bases
GTCATAGCGTTTACGGGTAGAGTGTCAAGGGGAGCGAGCGGGGTGAGTCTTGCTAATCGAATCTCCTGGAGTCGCGCAGG
CGTTTACCGATTGAACCCGG

Product: putative transposase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 436; Mature: 436

Protein sequence:

>436_residues
MCHEAISFCSCRNRRSKELLPTSYVHVVFTIPHELSWLALQNKKVVYDLLFRTSAATLLEVAADPKHLGAEIGFLSVLHT
WGQTLQHHPHIHCVIPSGGLSPDHQHWVHPRYPFFLPVPVLRRVFRGKFVAGLKSAFHQGKLVFPGSLQPMAAEKSFAKF
LRPLFRKEWVVYAKRPFGGPEHVLHYLARYTHRVAISNHRLLSVADGKVTFRWKDYAQGSKQRKMTVTAEEFLRRFMLHV
LPLGFIRIRFSGFLANRHRKQLLPLCQTLLGARTTQPSESLGSSETKPLAAWRCLVVVATWSSSRNLLLNRSDGGLLTGS
ISLTVRSRHSLSDLERASTRAFHVCPYRRQRVLRGGKRGPSPLPTHPYRRSRRRTTTSSPALPANRSSPMLQTPFNTHRC
RVRRRRQRPSSNASIESAPARSSRPWTGLPRRGTPD

Sequences:

>Translated_436_residues
MCHEAISFCSCRNRRSKELLPTSYVHVVFTIPHELSWLALQNKKVVYDLLFRTSAATLLEVAADPKHLGAEIGFLSVLHT
WGQTLQHHPHIHCVIPSGGLSPDHQHWVHPRYPFFLPVPVLRRVFRGKFVAGLKSAFHQGKLVFPGSLQPMAAEKSFAKF
LRPLFRKEWVVYAKRPFGGPEHVLHYLARYTHRVAISNHRLLSVADGKVTFRWKDYAQGSKQRKMTVTAEEFLRRFMLHV
LPLGFIRIRFSGFLANRHRKQLLPLCQTLLGARTTQPSESLGSSETKPLAAWRCLVVVATWSSSRNLLLNRSDGGLLTGS
ISLTVRSRHSLSDLERASTRAFHVCPYRRQRVLRGGKRGPSPLPTHPYRRSRRRTTTSSPALPANRSSPMLQTPFNTHRC
RVRRRRQRPSSNASIESAPARSSRPWTGLPRRGTPD
>Mature_436_residues
MCHEAISFCSCRNRRSKELLPTSYVHVVFTIPHELSWLALQNKKVVYDLLFRTSAATLLEVAADPKHLGAEIGFLSVLHT
WGQTLQHHPHIHCVIPSGGLSPDHQHWVHPRYPFFLPVPVLRRVFRGKFVAGLKSAFHQGKLVFPGSLQPMAAEKSFAKF
LRPLFRKEWVVYAKRPFGGPEHVLHYLARYTHRVAISNHRLLSVADGKVTFRWKDYAQGSKQRKMTVTAEEFLRRFMLHV
LPLGFIRIRFSGFLANRHRKQLLPLCQTLLGARTTQPSESLGSSETKPLAAWRCLVVVATWSSSRNLLLNRSDGGLLTGS
ISLTVRSRHSLSDLERASTRAFHVCPYRRQRVLRGGKRGPSPLPTHPYRRSRRRTTTSSPALPANRSSPMLQTPFNTHRC
RVRRRRQRPSSNASIESAPARSSRPWTGLPRRGTPD

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the transposase 32 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007069 [H]

Pfam domain/function: PF04986 Transposase_32 [H]

EC number: NA

Molecular weight: Translated: 49655; Mature: 49655

Theoretical pI: Translated: 12.03; Mature: 12.03

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.8 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
1.8 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MCHEAISFCSCRNRRSKELLPTSYVHVVFTIPHELSWLALQNKKVVYDLLFRTSAATLLE
CCHHHHHHHHHCCCCCCCCCCCCEEEEEEECCCCCEEEEECCCHHHHHHHHHHHHHHHHH
VAADPKHLGAEIGFLSVLHTWGQTLQHHPHIHCVIPSGGLSPDHQHWVHPRYPFFLPVPV
HHCCHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCCCCCCCCCEECHHH
LRRVFRGKFVAGLKSAFHQGKLVFPGSLQPMAAEKSFAKFLRPLFRKEWVVYAKRPFGGP
HHHHHHHHHHHHHHHHHHCCCEEECCCCCCHHHHHHHHHHHHHHHHCCEEEEEECCCCCH
EHVLHYLARYTHRVAISNHRLLSVADGKVTFRWKDYAQGSKQRKMTVTAEEFLRRFMLHV
HHHHHHHHHHHHHEEECCCEEEEEECCEEEEEEHHHCCCCCCCEEEECHHHHHHHHHHHH
LPLGFIRIRFSGFLANRHRKQLLPLCQTLLGARTTQPSESLGSSETKPLAAWRCLVVVAT
HHHHHEEEEHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHCCCCCCCHHHHEEEEEEEEE
WSSSRNLLLNRSDGGLLTGSISLTVRSRHSLSDLERASTRAFHVCPYRRQRVLRGGKRGP
CCCCCCEEEECCCCCEEEEEEEEEEECCCCHHHHHHHHCCEEEECCHHHHHHHCCCCCCC
SPLPTHPYRRSRRRTTTSSPALPANRSSPMLQTPFNTHRCRVRRRRQRPSSNASIESAPA
CCCCCCCHHHHHCCCCCCCCCCCCCCCCCEEECCCCHHHHHHHHHHCCCCCCCCCCCCCC
RSSRPWTGLPRRGTPD
CCCCCCCCCCCCCCCC
>Mature Secondary Structure
MCHEAISFCSCRNRRSKELLPTSYVHVVFTIPHELSWLALQNKKVVYDLLFRTSAATLLE
CCHHHHHHHHHCCCCCCCCCCCCEEEEEEECCCCCEEEEECCCHHHHHHHHHHHHHHHHH
VAADPKHLGAEIGFLSVLHTWGQTLQHHPHIHCVIPSGGLSPDHQHWVHPRYPFFLPVPV
HHCCHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCCCCCCCCCEECHHH
LRRVFRGKFVAGLKSAFHQGKLVFPGSLQPMAAEKSFAKFLRPLFRKEWVVYAKRPFGGP
HHHHHHHHHHHHHHHHHHCCCEEECCCCCCHHHHHHHHHHHHHHHHCCEEEEEECCCCCH
EHVLHYLARYTHRVAISNHRLLSVADGKVTFRWKDYAQGSKQRKMTVTAEEFLRRFMLHV
HHHHHHHHHHHHHEEECCCEEEEEECCEEEEEEHHHCCCCCCCEEEECHHHHHHHHHHHH
LPLGFIRIRFSGFLANRHRKQLLPLCQTLLGARTTQPSESLGSSETKPLAAWRCLVVVAT
HHHHHEEEEHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHCCCCCCCHHHHEEEEEEEEE
WSSSRNLLLNRSDGGLLTGSISLTVRSRHSLSDLERASTRAFHVCPYRRQRVLRGGKRGP
CCCCCCEEEECCCCCEEEEEEEEEEECCCCHHHHHHHHCCEEEECCHHHHHHHCCCCCCC
SPLPTHPYRRSRRRTTTSSPALPANRSSPMLQTPFNTHRCRVRRRRQRPSSNASIESAPA
CCCCCCCHHHHHCCCCCCCCCCCCCCCCCEEECCCCHHHHHHHHHHCCCCCCCCCCCCCC
RSSRPWTGLPRRGTPD
CCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9163424 [H]