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The map label for this gene is yfmJ [H]

Identifier: 116623545

GI number: 116623545

Start: 5642370

End: 5643380

Strand: Reverse

Name: yfmJ [H]

Synonym: Acid_4455

Alternate gene names: 116623545

Gene position: 5643380-5642370 (Counterclockwise)

Preceding gene: 116623547

Following gene: 116623541

Centisome position: 56.63

GC content: 59.64

Gene sequence:

>1011_bases
ATGACGGATTCGAACATAGTCAGCCGTGAGATTCGCCTGGCGTCCCGGCCGACCGGGATGCCAACTGCCGCTAACTTTAC
TATGGTGCGCACCGAGCTCCCGCGGCTCGAGGATCAACAGGTGTTGGTGCGTAATCTCTACCTGTCAGTTGACCCTTACA
TGCGCGGCCGGATGAACCCGGGTAAATCTTATGTGCCACCTTTCGAAGTGGGCAAGGCGTTAGACGGGGCGGCCGTGGGG
GAAGTCCTTGAGTCGCGCGCCGAAGACTTCAAGGCCGGCGATGCGGTCACATCATTTTTCGGCTGGCGCGATTGCTTCGT
TTCGAGCCCCAAATACCTTCATCCCATCGACCGTGAGGTGCAGTCCCTATCGGTATATTTGGGTGTGCTCGGCATGACAG
GGATGACCGCGTGGATCGGGTTGAATCTTGTCGATGTAAAAGCGGGGGATGTGATTTTCGTCTCGGGCGCGGCGGGCGCC
GTTGGGAGCGTGGCCGGTCAACTGGCGAAGTTGCGCGGATGCCGGGTCATCGGCGCCGCGGGTTGCGACGAAAAGGTCAA
GCTGTTACGCGAAAGGTTCGGCTTCGATTCCGCTTTCAATTACAAAGCCGGGCCGGTCCGCGCCCAACTCGAGCGGGAAG
CCCCCGAGGGAATCGACGTGTACTTCGACAATGTAGGCGGAGAAATGCTCGAGGCGGCGCTGTGGAGCCTTCGCACCCAT
AGCCGCATCATCGCCTGCGGCAGTATCTCCGGGTATAACGACGAAAGTCCGCGTCCCGGGCCTTCGAACCTGCACAATAT
TGTCACGAAGCGGCTGACGATCAAGGGGTTCATTGTGAGCGACTGGATGCAGCAGCGCGCGCAGTTCGAACACGAGGTGG
CGCCGCTATTTGTGGCCGGCAAATTGAAGCACGAGGAGACCGTGGTCCACGGGTTGGAGCACGCCGTGGATGCTTTTATC
GGGCTTTTTCGTGGTGAAAACTCCGGCAAGATGGTGGTCGCGCTCGGCTAA

Upstream 100 bases:

>100_bases
GTGCGTATCAACTCTGGCAGGACCGGGGTTGCCCGGAGGGAAGCGCGGATGAAGATTGGTTCCGCGCCACGGAGGAATTG
CGTTCCCGCAGCGTTCAAAA

Downstream 100 bases:

>100_bases
GCCCTGGGGGTAAGGGTTCGGCTCGGCCGGCAAACTCCCTTTTCTCGCAGAGCCGCAGAGTAACGCGAAGAAGAAAAAAG
ACCGGCGAAAGCGCCAGCGC

Product: alcohol dehydrogenase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 336; Mature: 335

Protein sequence:

>336_residues
MTDSNIVSREIRLASRPTGMPTAANFTMVRTELPRLEDQQVLVRNLYLSVDPYMRGRMNPGKSYVPPFEVGKALDGAAVG
EVLESRAEDFKAGDAVTSFFGWRDCFVSSPKYLHPIDREVQSLSVYLGVLGMTGMTAWIGLNLVDVKAGDVIFVSGAAGA
VGSVAGQLAKLRGCRVIGAAGCDEKVKLLRERFGFDSAFNYKAGPVRAQLEREAPEGIDVYFDNVGGEMLEAALWSLRTH
SRIIACGSISGYNDESPRPGPSNLHNIVTKRLTIKGFIVSDWMQQRAQFEHEVAPLFVAGKLKHEETVVHGLEHAVDAFI
GLFRGENSGKMVVALG

Sequences:

>Translated_336_residues
MTDSNIVSREIRLASRPTGMPTAANFTMVRTELPRLEDQQVLVRNLYLSVDPYMRGRMNPGKSYVPPFEVGKALDGAAVG
EVLESRAEDFKAGDAVTSFFGWRDCFVSSPKYLHPIDREVQSLSVYLGVLGMTGMTAWIGLNLVDVKAGDVIFVSGAAGA
VGSVAGQLAKLRGCRVIGAAGCDEKVKLLRERFGFDSAFNYKAGPVRAQLEREAPEGIDVYFDNVGGEMLEAALWSLRTH
SRIIACGSISGYNDESPRPGPSNLHNIVTKRLTIKGFIVSDWMQQRAQFEHEVAPLFVAGKLKHEETVVHGLEHAVDAFI
GLFRGENSGKMVVALG
>Mature_335_residues
TDSNIVSREIRLASRPTGMPTAANFTMVRTELPRLEDQQVLVRNLYLSVDPYMRGRMNPGKSYVPPFEVGKALDGAAVGE
VLESRAEDFKAGDAVTSFFGWRDCFVSSPKYLHPIDREVQSLSVYLGVLGMTGMTAWIGLNLVDVKAGDVIFVSGAAGAV
GSVAGQLAKLRGCRVIGAAGCDEKVKLLRERFGFDSAFNYKAGPVRAQLEREAPEGIDVYFDNVGGEMLEAALWSLRTHS
RIIACGSISGYNDESPRPGPSNLHNIVTKRLTIKGFIVSDWMQQRAQFEHEVAPLFVAGKLKHEETVVHGLEHAVDAFIG
LFRGENSGKMVVALG

Specific function: Putative quinone oxidoreductase that may contribute to the degradation of aromatic compounds (Potential) [H]

COG id: COG2130

COG function: function code R; Putative NADP-dependent oxidoreductases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the NADP-dependent oxidoreductase L4BD family [H]

Homologues:

Organism=Homo sapiens, GI226246682, Length=345, Percent_Identity=39.1304347826087, Blast_Score=226, Evalue=3e-59,
Organism=Homo sapiens, GI226246680, Length=345, Percent_Identity=39.1304347826087, Blast_Score=226, Evalue=3e-59,
Organism=Homo sapiens, GI22748929, Length=345, Percent_Identity=39.1304347826087, Blast_Score=226, Evalue=3e-59,
Organism=Homo sapiens, GI226059159, Length=332, Percent_Identity=36.144578313253, Blast_Score=202, Evalue=4e-52,
Organism=Homo sapiens, GI226059133, Length=332, Percent_Identity=36.144578313253, Blast_Score=202, Evalue=4e-52,
Organism=Homo sapiens, GI226056130, Length=280, Percent_Identity=37.8571428571429, Blast_Score=175, Evalue=5e-44,
Organism=Homo sapiens, GI28557745, Length=322, Percent_Identity=31.6770186335404, Blast_Score=123, Evalue=3e-28,
Organism=Escherichia coli, GI226510941, Length=332, Percent_Identity=39.7590361445783, Blast_Score=246, Evalue=1e-66,
Organism=Caenorhabditis elegans, GI133901712, Length=333, Percent_Identity=35.1351351351351, Blast_Score=187, Evalue=6e-48,
Organism=Caenorhabditis elegans, GI133901710, Length=333, Percent_Identity=35.1351351351351, Blast_Score=187, Evalue=6e-48,
Organism=Caenorhabditis elegans, GI17507255, Length=232, Percent_Identity=30.1724137931034, Blast_Score=78, Evalue=8e-15,
Organism=Saccharomyces cerevisiae, GI6323504, Length=362, Percent_Identity=30.939226519337, Blast_Score=126, Evalue=5e-30,
Organism=Saccharomyces cerevisiae, GI6319520, Length=229, Percent_Identity=27.0742358078603, Blast_Score=74, Evalue=2e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013149
- InterPro:   IPR002085
- InterPro:   IPR011032
- InterPro:   IPR016040 [H]

Pfam domain/function: PF00107 ADH_zinc_N [H]

EC number: 1.-.-.- [C]

Molecular weight: Translated: 36594; Mature: 36463

Theoretical pI: Translated: 6.88; Mature: 6.88

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTDSNIVSREIRLASRPTGMPTAANFTMVRTELPRLEDQQVLVRNLYLSVDPYMRGRMNP
CCCCHHHHHHHHHHCCCCCCCCCCCEEEEEHHCCCCCHHHHHHHHHHHEECHHHCCCCCC
GKSYVPPFEVGKALDGAAVGEVLESRAEDFKAGDAVTSFFGWRDCFVSSPKYLHPIDREV
CCCCCCHHHHCCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCCCCHHHHHH
QSLSVYLGVLGMTGMTAWIGLNLVDVKAGDVIFVSGAAGAVGSVAGQLAKLRGCRVIGAA
HHHHHHHHHHHHHHHHHHHCCEEEEECCCCEEEEECCCCHHHHHHHHHHHHCCCEEEECC
GCDEKVKLLRERFGFDSAFNYKAGPVRAQLEREAPEGIDVYFDNVGGEMLEAALWSLRTH
CCCHHHHHHHHHHCCCCCCCCCCCCHHHHHHHCCCCCCEEEEECCCHHHHHHHHHHHHHC
SRIIACGSISGYNDESPRPGPSNLHNIVTKRLTIKGFIVSDWMQQRAQFEHEVAPLFVAG
CEEEEECCCCCCCCCCCCCCCHHHHHHHHHHHEEEHHHHHHHHHHHHHHHHHCCCEEEEC
KLKHEETVVHGLEHAVDAFIGLFRGENSGKMVVALG
CCCHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEC
>Mature Secondary Structure 
TDSNIVSREIRLASRPTGMPTAANFTMVRTELPRLEDQQVLVRNLYLSVDPYMRGRMNP
CCCHHHHHHHHHHCCCCCCCCCCCEEEEEHHCCCCCHHHHHHHHHHHEECHHHCCCCCC
GKSYVPPFEVGKALDGAAVGEVLESRAEDFKAGDAVTSFFGWRDCFVSSPKYLHPIDREV
CCCCCCHHHHCCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCCCCHHHHHH
QSLSVYLGVLGMTGMTAWIGLNLVDVKAGDVIFVSGAAGAVGSVAGQLAKLRGCRVIGAA
HHHHHHHHHHHHHHHHHHHCCEEEEECCCCEEEEECCCCHHHHHHHHHHHHCCCEEEECC
GCDEKVKLLRERFGFDSAFNYKAGPVRAQLEREAPEGIDVYFDNVGGEMLEAALWSLRTH
CCCHHHHHHHHHHCCCCCCCCCCCCHHHHHHHCCCCCCEEEEECCCHHHHHHHHHHHHHC
SRIIACGSISGYNDESPRPGPSNLHNIVTKRLTIKGFIVSDWMQQRAQFEHEVAPLFVAG
CEEEEECCCCCCCCCCCCCCCHHHHHHHHHHHEEEHHHHHHHHHHHHHHHHHCCCEEEEC
KLKHEETVVHGLEHAVDAFIGLFRGENSGKMVVALG
CCCHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9272861; 9384377 [H]