| Definition | Candidatus Solibacter usitatus Ellin6076 chromosome, complete genome. |
|---|---|
| Accession | NC_008536 |
| Length | 9,965,640 |
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The map label for this gene is 116623499
Identifier: 116623499
GI number: 116623499
Start: 5578526
End: 5579590
Strand: Reverse
Name: 116623499
Synonym: Acid_4409
Alternate gene names: NA
Gene position: 5579590-5578526 (Counterclockwise)
Preceding gene: 116623500
Following gene: 116623498
Centisome position: 55.99
GC content: 64.88
Gene sequence:
>1065_bases ATGCAGTCCAAACCTCGCCTGGCGTTCTTTGAGCGCTATCTCTCGCTGTGGGTAGCGCTCTGCATGGCGGCCGGAATTCT GCTGGGCAGAAGCTGGCCCTCGGCGGTCCGGTCCGTGCGCTCGCTCGAGTTCGGGCGCGGGAGCCAGATCAACGTCGCCA TCGCGGTGCTGATCTGGCTCATGATCACGCCGATGATGATGAAGGTCGATTTCACCGCGATCCGGGACGTGGGGCGCAGG CCCGCCGGGTTGGCGGTCACGCTGGCGGTGAACTGGCTGGTCAAGCCGTTTTCGATGGCGCTGCTCGCATGGCTCTTTTT CCGCATCGTCTTTTCGCCCTGGGTCAGCGGCGCGGAGGCCGATCAGTATATCGCGGGCTGCATCGTGCTGGCTGCCGCGC CGTGTACCGCGATGGTCTTCGTCTGGAGCCACTTGACGGGCGGCGACGCGGCGTACACGCTGGTGCAGGTGGCGGTCAAC GACCTGATCATGCTCGTGCTGTTCGTCCCCATTGTACGGCTCCTGGTTACCGGCGCATCTTCGCTCACGGTCCCTTTCGG CGTCCTGCTGTGGTCGGTGACGGTCTTCATCGTGATCCCGCTGGCCGCGGGGACGCTGCTGCGGACGCGGCTGTTGGCGG CTCATGGGCGCCCGTGGTTCGAAGGTACGCTGATGCCCCGTTTTGCGCCGATCACGATCGGCGCCCTACTCGCGACGCTG GTGTTGATCTTCGCTTTTCAGGCGGACAACATCACAGGCCGGTTCGGCCACGTGCTGCTGATCGCGGTGCCGATTACGCT GCAGGTATATTTCAACGCTTCGCTGGCCTACGGGCTGATGAAGTGGTTGAAAGTGGAGCACGCAGTGGCGGCGCCCGGCG CGCTGATCGGCGCCAGCAATTTCTTCGAACTGGCGGTAGCGACGGCGATCGCGCTGTTCGGGCCCGATTCGGGCGCGGCG CTGGCGACGGTGGTCGGCGTATTGGTCGAGGTGCCGGTGATGCTCTCGGTGTGCGGCGTCTGCAATCGAACCGGTCACTG GTTCCCCGGAAAGCAGGAGGCCTGA
Upstream 100 bases:
>100_bases GTCGCGCCGCTGGTGGACGGAAAGTTCTTCAGCGCTTTCATTCGCGCGCGCAAGCCGGCCGCGGCCTGCTGCGGCCCCGC CTGCTGTTCGTAGGGCAAAT
Downstream 100 bases:
>100_bases GTGCCCAGCGTGTTGATCCTATGTACCGGAAACTCGGCGCGCTCGCAGATGGCCGAGGGCCTGTTCCGCCAGGAGAGCGG CGGGACGTGGGAAGTCTGCT
Product: bile acid:sodium symporter
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 354; Mature: 354
Protein sequence:
>354_residues MQSKPRLAFFERYLSLWVALCMAAGILLGRSWPSAVRSVRSLEFGRGSQINVAIAVLIWLMITPMMMKVDFTAIRDVGRR PAGLAVTLAVNWLVKPFSMALLAWLFFRIVFSPWVSGAEADQYIAGCIVLAAAPCTAMVFVWSHLTGGDAAYTLVQVAVN DLIMLVLFVPIVRLLVTGASSLTVPFGVLLWSVTVFIVIPLAAGTLLRTRLLAAHGRPWFEGTLMPRFAPITIGALLATL VLIFAFQADNITGRFGHVLLIAVPITLQVYFNASLAYGLMKWLKVEHAVAAPGALIGASNFFELAVATAIALFGPDSGAA LATVVGVLVEVPVMLSVCGVCNRTGHWFPGKQEA
Sequences:
>Translated_354_residues MQSKPRLAFFERYLSLWVALCMAAGILLGRSWPSAVRSVRSLEFGRGSQINVAIAVLIWLMITPMMMKVDFTAIRDVGRR PAGLAVTLAVNWLVKPFSMALLAWLFFRIVFSPWVSGAEADQYIAGCIVLAAAPCTAMVFVWSHLTGGDAAYTLVQVAVN DLIMLVLFVPIVRLLVTGASSLTVPFGVLLWSVTVFIVIPLAAGTLLRTRLLAAHGRPWFEGTLMPRFAPITIGALLATL VLIFAFQADNITGRFGHVLLIAVPITLQVYFNASLAYGLMKWLKVEHAVAAPGALIGASNFFELAVATAIALFGPDSGAA LATVVGVLVEVPVMLSVCGVCNRTGHWFPGKQEA >Mature_354_residues MQSKPRLAFFERYLSLWVALCMAAGILLGRSWPSAVRSVRSLEFGRGSQINVAIAVLIWLMITPMMMKVDFTAIRDVGRR PAGLAVTLAVNWLVKPFSMALLAWLFFRIVFSPWVSGAEADQYIAGCIVLAAAPCTAMVFVWSHLTGGDAAYTLVQVAVN DLIMLVLFVPIVRLLVTGASSLTVPFGVLLWSVTVFIVIPLAAGTLLRTRLLAAHGRPWFEGTLMPRFAPITIGALLATL VLIFAFQADNITGRFGHVLLIAVPITLQVYFNASLAYGLMKWLKVEHAVAAPGALIGASNFFELAVATAIALFGPDSGAA LATVVGVLVEVPVMLSVCGVCNRTGHWFPGKQEA
Specific function: Unknown
COG id: COG0798
COG function: function code P; Arsenite efflux pump ACR3 and related permeases
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the ACR3 family [H]
Homologues:
Organism=Saccharomyces cerevisiae, GI6325459, Length=323, Percent_Identity=26.9349845201238, Blast_Score=97, Evalue=3e-21,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004706 - InterPro: IPR002657 [H]
Pfam domain/function: PF01758 SBF [H]
EC number: NA
Molecular weight: Translated: 38086; Mature: 38086
Theoretical pI: Translated: 9.81; Mature: 9.81
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 3.4 %Met (Translated Protein) 4.8 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 3.4 %Met (Mature Protein) 4.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQSKPRLAFFERYLSLWVALCMAAGILLGRSWPSAVRSVRSLEFGRGSQINVAIAVLIWL CCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCCHHHHHHHHHHH MITPMMMKVDFTAIRDVGRRPAGLAVTLAVNWLVKPFSMALLAWLFFRIVFSPWVSGAEA HHHHHHHHHHHHHHHHCCCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCH DQYIAGCIVLAAAPCTAMVFVWSHLTGGDAAYTLVQVAVNDLIMLVLFVPIVRLLVTGAS HHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC SLTVPFGVLLWSVTVFIVIPLAAGTLLRTRLLAAHGRPWFEGTLMPRFAPITIGALLATL CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHH VLIFAFQADNITGRFGHVLLIAVPITLQVYFNASLAYGLMKWLKVEHAVAAPGALIGASN HHHHHHCCCCCCCHHHHEEEEEEEHEEEEEECHHHHHHHHHHHHHHHHHCCCCHHCCCCH FFELAVATAIALFGPDSGAALATVVGVLVEVPVMLSVCGVCNRTGHWFPGKQEA HHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCC >Mature Secondary Structure MQSKPRLAFFERYLSLWVALCMAAGILLGRSWPSAVRSVRSLEFGRGSQINVAIAVLIWL CCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCCHHHHHHHHHHH MITPMMMKVDFTAIRDVGRRPAGLAVTLAVNWLVKPFSMALLAWLFFRIVFSPWVSGAEA HHHHHHHHHHHHHHHHCCCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCH DQYIAGCIVLAAAPCTAMVFVWSHLTGGDAAYTLVQVAVNDLIMLVLFVPIVRLLVTGAS HHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC SLTVPFGVLLWSVTVFIVIPLAAGTLLRTRLLAAHGRPWFEGTLMPRFAPITIGALLATL CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHH VLIFAFQADNITGRFGHVLLIAVPITLQVYFNASLAYGLMKWLKVEHAVAAPGALIGASN HHHHHHCCCCCCCHHHHEEEEEEEHEEEEEECHHHHHHHHHHHHHHHHHCCCCHHCCCCH FFELAVATAIALFGPDSGAALATVVGVLVEVPVMLSVCGVCNRTGHWFPGKQEA HHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 8905231 [H]