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The map label for this gene is 116623473

Identifier: 116623473

GI number: 116623473

Start: 5544157

End: 5545017

Strand: Reverse

Name: 116623473

Synonym: Acid_4383

Alternate gene names: NA

Gene position: 5545017-5544157 (Counterclockwise)

Preceding gene: 116623474

Following gene: 116623472

Centisome position: 55.64

GC content: 63.76

Gene sequence:

>861_bases
ATGCATCAGAGGAATGTGGATCCTGGTTTACGCCGCTTCGCGGTGCTCTTAGCGTGTTGTACTTTCGGGCTGGTGATCGC
CGGTGCGCTGGTCACGAGCAACGACGCGGCCCTGTCTGTACCGGACTGGCCCTTTTCCTGGGGCCGGCTGGTTCCCACGC
TCGAAGGCGGAATTCGCTATGAATTCACCCACCGCGTCATGGCCCTCCTGGCCGCGATTTTCACGACAATTCTGGCGGTT
CGGTTACGCACGCGCCTCGCCTGGACCGCGCTCGGACTGGTACTGGGGCAGGCCGCACTGGGGGGCATGGTGGTGAAGTT
CGTAACGCCCGCGTGGGCAACGATCGGGCATGCGTGCCTGGCGCAGCTCTATTTTGCAGTAGTGACGGCGATTGTGGTCG
ATCAATACGTGGATGGCAGTGCGCCGGGCGGATTCCGGTCGCCGGCTCCCGTCGTGGCCGCCGTGGCGCTGTTCGCGCAG
ACGATCTTAGGGGCGGCGGTGCGGTACAACGTGGTGATTCCGGTGGCGCATATCGCGGGGGCGGCGGTGGCGACCATCCT
GGTAATGTGGGCGGGGCTTTCGATTCTGATGCAGCACATGGAGAATGCGGCGCTGCGTCGTCCGGCGATGGCGCTGTTGA
CGATCACGTTTTCGCAGGTCTTTTTGGGAATCGGCGCGTACATGGCGCGAGTAGCGTTTGCAGGCGCACCGCAGCCGATG
CCGATGGTGGTTTGGTTTACCGTGGCGCATGTGGCCGTGGGTTCTCTGGCGTTGGGCGCCGCGGTGGCGCTTGCGATGAT
AGTGTATCGCCAGCCGCGCAATCAGGCGGTGATGGCAAATGGGGGGATCGCGATCGCCTGA

Upstream 100 bases:

>100_bases
AGACGGTGACCGTGGGCGCCAAGGAGAGCAAGACTGTTGATTTTTCCTATAAAGGATAGATAAATATGGGGCAGGTTTTG
GGCAGCCTGCCCCCGTCTCC

Downstream 100 bases:

>100_bases
TGCGCGACTATATCGAACTGACGAAACCGCGGATCACCTGGCTTATCCTGATGAGCACTGGCATCGGGTATTTCTTCGGG
CTGCCGCAGGCGAGCAACTG

Product: cytochrome oxidase assembly

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 286; Mature: 286

Protein sequence:

>286_residues
MHQRNVDPGLRRFAVLLACCTFGLVIAGALVTSNDAALSVPDWPFSWGRLVPTLEGGIRYEFTHRVMALLAAIFTTILAV
RLRTRLAWTALGLVLGQAALGGMVVKFVTPAWATIGHACLAQLYFAVVTAIVVDQYVDGSAPGGFRSPAPVVAAVALFAQ
TILGAAVRYNVVIPVAHIAGAAVATILVMWAGLSILMQHMENAALRRPAMALLTITFSQVFLGIGAYMARVAFAGAPQPM
PMVVWFTVAHVAVGSLALGAAVALAMIVYRQPRNQAVMANGGIAIA

Sequences:

>Translated_286_residues
MHQRNVDPGLRRFAVLLACCTFGLVIAGALVTSNDAALSVPDWPFSWGRLVPTLEGGIRYEFTHRVMALLAAIFTTILAV
RLRTRLAWTALGLVLGQAALGGMVVKFVTPAWATIGHACLAQLYFAVVTAIVVDQYVDGSAPGGFRSPAPVVAAVALFAQ
TILGAAVRYNVVIPVAHIAGAAVATILVMWAGLSILMQHMENAALRRPAMALLTITFSQVFLGIGAYMARVAFAGAPQPM
PMVVWFTVAHVAVGSLALGAAVALAMIVYRQPRNQAVMANGGIAIA
>Mature_286_residues
MHQRNVDPGLRRFAVLLACCTFGLVIAGALVTSNDAALSVPDWPFSWGRLVPTLEGGIRYEFTHRVMALLAAIFTTILAV
RLRTRLAWTALGLVLGQAALGGMVVKFVTPAWATIGHACLAQLYFAVVTAIVVDQYVDGSAPGGFRSPAPVVAAVALFAQ
TILGAAVRYNVVIPVAHIAGAAVATILVMWAGLSILMQHMENAALRRPAMALLTITFSQVFLGIGAYMARVAFAGAPQPM
PMVVWFTVAHVAVGSLALGAAVALAMIVYRQPRNQAVMANGGIAIA

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 30059; Mature: 30059

Theoretical pI: Translated: 10.57; Mature: 10.57

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
4.2 %Met     (Translated Protein)
5.2 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
4.2 %Met     (Mature Protein)
5.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure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HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCEEEC
>Mature Secondary Structure
MHQRNVDPGLRRFAVLLACCTFGLVIAGALVTSNDAALSVPDWPFSWGRLVPTLEGGIRY
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEECCCCCCCHHCCCHHHCCCCCH
EFTHRVMALLAAIFTTILAVRLRTRLAWTALGLVLGQAALGGMVVKFVTPAWATIGHACL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AQLYFAVVTAIVVDQYVDGSAPGGFRSPAPVVAAVALFAQTILGAAVRYNVVIPVAHIAG
HHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHEEHHHHHHH
AAVATILVMWAGLSILMQHMENAALRRPAMALLTITFSQVFLGIGAYMARVAFAGAPQPM
HHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
PMVVWFTVAHVAVGSLALGAAVALAMIVYRQPRNQAVMANGGIAIA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA