| Definition | Candidatus Solibacter usitatus Ellin6076 chromosome, complete genome. |
|---|---|
| Accession | NC_008536 |
| Length | 9,965,640 |
Click here to switch to the map view.
The map label for this gene is 116623474
Identifier: 116623474
GI number: 116623474
Start: 5545059
End: 5545847
Strand: Reverse
Name: 116623474
Synonym: Acid_4384
Alternate gene names: NA
Gene position: 5545847-5545059 (Counterclockwise)
Preceding gene: 116623475
Following gene: 116623473
Centisome position: 55.65
GC content: 59.19
Gene sequence:
>789_bases ATGACGAAGATTTGGATGGGAGCAGTTCTCATCGGAAGTCTGACGCTGGCCGGGTGCGGAAGCGACAAACCGGCGGAGAC GGCAAAGACCGAGGCCACCGCTCCTGCGGCGGCGGGCGGTGCGGCGGCAACGCCGGACGAGGCCAACGGCGGCACCGTGA CCGGAAAGGTGGCCTTCGGCGGCGAGAAGCCAAAGATGGCGACGCTCGATATGAGCGCTAATCCGGCGTGCGAACGGGCG CACAAGGGATCGCCGCAAAAGAGTGAAGAAGTGGTGGTCAATGACAACGGGACGCTGAAGTACGTATTCGTCTGGGTGAA GAGCGGACTTCCCGATGGCAAGCAGTGGGCGGTTACGCCAACGGCAGTCACGCTGGACCAGAGCGGCTGCATGTACAAGC CGCACATGATCGGCGTGATGACGGGGCAGAACATCGAAGTGAAGAACGACGATCCGACGAACCATAACATTCATCCGATG CCGACGGTGAATCCGGATTGGAACGAATCGCAATCGCCGGGGCAGGCGCCGATGATGAAGACGTTCGCGCGCCAGGAAGT CATGATCCCGGTGAAGTGCAACGTACATCCCTGGATGCGGAGTTATATCGGGGTCGTCGGGCATCCATTCTTCGCCGTGA CGGGCGACGACGGAACGTTTACAATAAAAGGACTACCTCCTGGGACCTACGTGATTCAAACCTGGCACGAAAAGTACGGG CCGATGGAACAGACGGTGACCGTGGGCGCCAAGGAGAGCAAGACTGTTGATTTTTCCTATAAAGGATAG
Upstream 100 bases:
>100_bases CTGGTCCGGTACATGTTCCAGTTCACACCGGAAGAATTATCGCGTTTGCGCAGCAGCGCCAGCGCGGGCAACTGACAACA CCGAGGAGGGTGAGAGGACG
Downstream 100 bases:
>100_bases ATAAATATGGGGCAGGTTTTGGGCAGCCTGCCCCCGTCTCCATGCATCAGAGGAATGTGGATCCTGGTTTACGCCGCTTC GCGGTGCTCTTAGCGTGTTG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 262; Mature: 261
Protein sequence:
>262_residues MTKIWMGAVLIGSLTLAGCGSDKPAETAKTEATAPAAAGGAAATPDEANGGTVTGKVAFGGEKPKMATLDMSANPACERA HKGSPQKSEEVVVNDNGTLKYVFVWVKSGLPDGKQWAVTPTAVTLDQSGCMYKPHMIGVMTGQNIEVKNDDPTNHNIHPM PTVNPDWNESQSPGQAPMMKTFARQEVMIPVKCNVHPWMRSYIGVVGHPFFAVTGDDGTFTIKGLPPGTYVIQTWHEKYG PMEQTVTVGAKESKTVDFSYKG
Sequences:
>Translated_262_residues MTKIWMGAVLIGSLTLAGCGSDKPAETAKTEATAPAAAGGAAATPDEANGGTVTGKVAFGGEKPKMATLDMSANPACERA HKGSPQKSEEVVVNDNGTLKYVFVWVKSGLPDGKQWAVTPTAVTLDQSGCMYKPHMIGVMTGQNIEVKNDDPTNHNIHPM PTVNPDWNESQSPGQAPMMKTFARQEVMIPVKCNVHPWMRSYIGVVGHPFFAVTGDDGTFTIKGLPPGTYVIQTWHEKYG PMEQTVTVGAKESKTVDFSYKG >Mature_261_residues TKIWMGAVLIGSLTLAGCGSDKPAETAKTEATAPAAAGGAAATPDEANGGTVTGKVAFGGEKPKMATLDMSANPACERAH KGSPQKSEEVVVNDNGTLKYVFVWVKSGLPDGKQWAVTPTAVTLDQSGCMYKPHMIGVMTGQNIEVKNDDPTNHNIHPMP TVNPDWNESQSPGQAPMMKTFARQEVMIPVKCNVHPWMRSYIGVVGHPFFAVTGDDGTFTIKGLPPGTYVIQTWHEKYGP MEQTVTVGAKESKTVDFSYKG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 27941; Mature: 27810
Theoretical pI: Translated: 6.87; Mature: 6.87
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 5.0 %Met (Translated Protein) 6.5 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 4.6 %Met (Mature Protein) 6.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTKIWMGAVLIGSLTLAGCGSDKPAETAKTEATAPAAAGGAAATPDEANGGTVTGKVAFG CCEEEEHHEEECCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEEEC GEKPKMATLDMSANPACERAHKGSPQKSEEVVVNDNGTLKYVFVWVKSGLPDGKQWAVTP CCCCCEEEEECCCCCHHHHHHCCCCCCCCEEEECCCCCEEEEEEEEECCCCCCCEEEEEC TAVTLDQSGCMYKPHMIGVMTGQNIEVKNDDPTNHNIHPMPTVNPDWNESQSPGQAPMMK EEEEECCCCCEECCEEEEEEECCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHH TFARQEVMIPVKCNVHPWMRSYIGVVGHPFFAVTGDDGTFTIKGLPPGTYVIQTWHEKYG HHHHCEEEEEEECCCCHHHHHHHHHHCCCEEEEECCCCEEEEECCCCCCEEEEEHHHHCC PMEQTVTVGAKESKTVDFSYKG CCCCEEEECCCCCEEEEEEECC >Mature Secondary Structure TKIWMGAVLIGSLTLAGCGSDKPAETAKTEATAPAAAGGAAATPDEANGGTVTGKVAFG CEEEEHHEEECCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEEEC GEKPKMATLDMSANPACERAHKGSPQKSEEVVVNDNGTLKYVFVWVKSGLPDGKQWAVTP CCCCCEEEEECCCCCHHHHHHCCCCCCCCEEEECCCCCEEEEEEEEECCCCCCCEEEEEC TAVTLDQSGCMYKPHMIGVMTGQNIEVKNDDPTNHNIHPMPTVNPDWNESQSPGQAPMMK EEEEECCCCCEECCEEEEEEECCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHH TFARQEVMIPVKCNVHPWMRSYIGVVGHPFFAVTGDDGTFTIKGLPPGTYVIQTWHEKYG HHHHCEEEEEEECCCCHHHHHHHHHHCCCEEEEECCCCEEEEECCCCCCEEEEEHHHHCC PMEQTVTVGAKESKTVDFSYKG CCCCEEEECCCCCEEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA