| Definition | Candidatus Solibacter usitatus Ellin6076 chromosome, complete genome. |
|---|---|
| Accession | NC_008536 |
| Length | 9,965,640 |
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The map label for this gene is pcp [H]
Identifier: 116623072
GI number: 116623072
Start: 5038163
End: 5041018
Strand: Reverse
Name: pcp [H]
Synonym: Acid_3976
Alternate gene names: 116623072
Gene position: 5041018-5038163 (Counterclockwise)
Preceding gene: 116623077
Following gene: 116623071
Centisome position: 50.58
GC content: 66.28
Gene sequence:
>2856_bases ATGGTTGGAGTTAGCGGGTCTAACGAAGTGGTACCTGGCTTGCCCATTTCACCCGCAACATCTATGACAAAAAATGTCGC GATCAGCCTGCTGATTTTTTGCGCAGGGCTTTCGGCTCAACCGCGCCTGATCAAGGGTGCGATACAGGACGCGAGGCGCA CACGGATGGCGGGGCACGTTCATCCGATGGCGAGCGCTGCAAACGACATCGGCGCGATGGACCCGGCGACGACCCTGCCG GCGATGACGCTGGTGCTGCGCCAGAGCGCGGCGCAGCAGGCCGATCTGGCGAATCTGCTGGCGGCGCAGCAGGACCCGGC ATCGCCGGAATACCACCACTGGCTGACACCGGAGCAGTACGCGGACCGGTTCGGCGCGTCGGCGGACGATGTGGCCAAGA TCACGGCGTGGCTGGCGCAGCACAATCTGCAAGTGACCGCGGTAGGGCGCGGGCGAATGTCGGTCACGTTTACGGGGACC GCGGGCGACGTGGAGCAGGCGTTCCAGGTGAGCATGCACCGGTACAGCGTGAACGGGCGCAACCATTTCGCCAACACCGC GGAACCGTCGCTGCCGGCGGCGATGGAGCCGGCGATCCGGAGCATCCATGGACTGCACGATTTCCTGATGAAGCCGCGGA GCGTGGTGCATCGCGCGGCGGTGGATCCGAATTACACGTCGAGCTCGGGCAATCATTATCTTGCGCCCGACGATATCGGC ACTATTTACAACGTGAAGGCATTGTGGAACGCGGGTTACGACGGCACGGGACAGAAGATCGCGATCGCGGGACAGACGCA AGTGGACGTGGCCGATATCCAGAAGTTTCGCGCGAAGTTCGGGCAGACCACGCCGGACCCGCAGATGATGCTGGTGCCCA ATACGAAAGACCCGGGGGTTTCGAAGGACGATCTCGGGGAGGCCGATCTCGACCTGGAATGGGCGGGCGCCGTGGCGCCG CAGGCAACCCTTCTCTATGTGTACTCCAATGACGTGATGGACGCGGTGCTGTACGCGATCGACCAGAACCTGGCGCCGGT ATTGAGCGTGAGCTACGGGCTGTGCGAGCCGCAGACGCTGAAATCGGACATGCTGCTGATGCAGACGTGGGCGCAGCAGG CGAACGCGCAGGGGATGACGTGGATCAATGCGGCGGGCGATTCGGGCGGAGCGGATTGCGTGACGGGCAGTTCGGGCAAC GGGGCGGCGCTGGCGGTGGATTCTCCGGCGGATATCCCGGAGGTCACGGGGATCGGCGGCACGACATTCAGCGAGGCGGC GGGGCAGTACTGGAATGCGACCAACTCGGCCAGCGGGGGCTCGGCAACAGCGTACATTCCGGAGACGGTTTGGAACGACA GTACGTCGGGCAGTCCGGCGGCCGGGGGCGGCGGCGCGAGCACGGTATTCACGCAACCCACATGGCAGACGGGGCTGGGA GTGCCGAGCAACGGGGCACGCAATGTCCCGGATATTTCGTTGAACGCGTCGGCGGAGCACGATGGATACCTGGTGTACTC GGGCGGGCAGCTTTCGGTATACGGCGGGACCTCGGCGGGGACGCCCGCGTTTGCCGGGATCACGGCGCTGCTCAATCATT ACCTGGTGGCAACGGGCGCGCAGAACGCGGCCGGCGTAGGCAACGTGAATCCGCGGCTGTACGCGTTGGCGCAGGCCGGC GCGGGGGTTTTCCACGATGTCACGGCGGGTGACAACATCATTACGGTGACTTGCGGACAGCGCGCGCGCAACTGCACGCC GGGAACCTATGGGTATCCGGCGGGGCAGGGTTATGACCTGGCGAGCGGGCTGGGATCGATCGACGCCTACAACCTGGTGA CGACGTGGCACAGCGGGGCGGCGAGTAGTAGCCGTGCGGCCTCGACGGTGGCGCTGGAGGCGACCACGCAGTCCGTGATC TCGACTGGCTCGGTGACGGTGACGGCGACGGTCACGGGGTCGGGTGGAAAGACACCGACCGGCTCGGTGACGTTCAGCTC CGGCGGGAAGCAGATCGGCGTGGGTACGCTGAGCGGCGGCAGCGGATCGGCGACTGCGAGCATCACGGTGAGCGCGGCGC AACTGCAGGTGGGCAGCAACAGCATCGTGGCGCAGTACAGCGGCGACAGCGCGCTGAATACGGCGACGGCGACGATCAGC GTGGCCGTGACCGCGGCCGCGGGGACCGCTCCGACGATCAGCGGAGTGGCGAACGGTGCGTCCTTCCAGAAGACTTATGC TCCGGGGATGGTGCTTTCGATCTTCGGAACGAATCTGGCGGGCACGGCCTGGGTGGCGTCCACGGTGCCGCTGGCGGTGC AGGCGTCAGGCGTCAGCGTGAAGATCGGTGGGGTGAACGCGCCGCTGTACTACGTCTCGCCGGGACAGATCAACGCGCAG ATTCCGTACGAGGCGCCGGTGAATCAGACGGTGACATTGAGCGTGGATAACAATGGCGCAACGGCGAGCACCACGTTCAC GGTAAGCGCGGCGGCTCCGGGACTGTTCACGGACGCGAGCGGCGGCGTGGCACCGACATCGACCGTAGCGCGGGGCGGAG TGATGGTCCTGTACGTCACGGGCGCGGGGGCGATGTCGCCGGCAATCGCGACGGGCGCGGCTCCGGCGGCGGGGACCGCG GTGGCACAGCTACCGGCGCCGGTACAGGCGATTTCCGTGACGGTCGGCGGCGTGACGGCGCCCGTGCAATTCGCGGGGAT TCCGACGGCGCTGGTGGGCGTGACGCAAATTAATGTGGCGGTACCGGCGACGGCTCCGTTGGGGAAGCAGGCAGTGATCG TCGGGGTTGGCGGGGCATCGAGCGCGGCGGGGAGCGTGGTGGTTACGGCGCAATAA
Upstream 100 bases:
>100_bases AACAAGAGCAGAGTACTGGGACGAAATGTCGCGGGAGTGAGGGCGAGGGTGGGACAAAATTCCGCGGTCGCGGACTGGGA AAAGCCGATGGGGTGAAACG
Downstream 100 bases:
>100_bases AGGGGGACTGGTCATAGGGACTAAATTCTTGGTAAAATAAGACTTAACCCTATGGCAGACCAGGAACAACCACCGCAGGG TCCACCTGCGCCACCACCGG
Product: peptidase S8/S53 subtilisin kexin sedolisin
Products: NA
Alternate protein names: Pepstatin-insensitive carboxyl proteinase; Pseudomonapepsin [H]
Number of amino acids: Translated: 951; Mature: 951
Protein sequence:
>951_residues MVGVSGSNEVVPGLPISPATSMTKNVAISLLIFCAGLSAQPRLIKGAIQDARRTRMAGHVHPMASAANDIGAMDPATTLP AMTLVLRQSAAQQADLANLLAAQQDPASPEYHHWLTPEQYADRFGASADDVAKITAWLAQHNLQVTAVGRGRMSVTFTGT AGDVEQAFQVSMHRYSVNGRNHFANTAEPSLPAAMEPAIRSIHGLHDFLMKPRSVVHRAAVDPNYTSSSGNHYLAPDDIG TIYNVKALWNAGYDGTGQKIAIAGQTQVDVADIQKFRAKFGQTTPDPQMMLVPNTKDPGVSKDDLGEADLDLEWAGAVAP QATLLYVYSNDVMDAVLYAIDQNLAPVLSVSYGLCEPQTLKSDMLLMQTWAQQANAQGMTWINAAGDSGGADCVTGSSGN GAALAVDSPADIPEVTGIGGTTFSEAAGQYWNATNSASGGSATAYIPETVWNDSTSGSPAAGGGGASTVFTQPTWQTGLG VPSNGARNVPDISLNASAEHDGYLVYSGGQLSVYGGTSAGTPAFAGITALLNHYLVATGAQNAAGVGNVNPRLYALAQAG AGVFHDVTAGDNIITVTCGQRARNCTPGTYGYPAGQGYDLASGLGSIDAYNLVTTWHSGAASSSRAASTVALEATTQSVI STGSVTVTATVTGSGGKTPTGSVTFSSGGKQIGVGTLSGGSGSATASITVSAAQLQVGSNSIVAQYSGDSALNTATATIS VAVTAAAGTAPTISGVANGASFQKTYAPGMVLSIFGTNLAGTAWVASTVPLAVQASGVSVKIGGVNAPLYYVSPGQINAQ IPYEAPVNQTVTLSVDNNGATASTTFTVSAAAPGLFTDASGGVAPTSTVARGGVMVLYVTGAGAMSPAIATGAAPAAGTA VAQLPAPVQAISVTVGGVTAPVQFAGIPTALVGVTQINVAVPATAPLGKQAVIVGVGGASSAAGSVVVTAQ
Sequences:
>Translated_951_residues MVGVSGSNEVVPGLPISPATSMTKNVAISLLIFCAGLSAQPRLIKGAIQDARRTRMAGHVHPMASAANDIGAMDPATTLP AMTLVLRQSAAQQADLANLLAAQQDPASPEYHHWLTPEQYADRFGASADDVAKITAWLAQHNLQVTAVGRGRMSVTFTGT AGDVEQAFQVSMHRYSVNGRNHFANTAEPSLPAAMEPAIRSIHGLHDFLMKPRSVVHRAAVDPNYTSSSGNHYLAPDDIG TIYNVKALWNAGYDGTGQKIAIAGQTQVDVADIQKFRAKFGQTTPDPQMMLVPNTKDPGVSKDDLGEADLDLEWAGAVAP QATLLYVYSNDVMDAVLYAIDQNLAPVLSVSYGLCEPQTLKSDMLLMQTWAQQANAQGMTWINAAGDSGGADCVTGSSGN GAALAVDSPADIPEVTGIGGTTFSEAAGQYWNATNSASGGSATAYIPETVWNDSTSGSPAAGGGGASTVFTQPTWQTGLG VPSNGARNVPDISLNASAEHDGYLVYSGGQLSVYGGTSAGTPAFAGITALLNHYLVATGAQNAAGVGNVNPRLYALAQAG AGVFHDVTAGDNIITVTCGQRARNCTPGTYGYPAGQGYDLASGLGSIDAYNLVTTWHSGAASSSRAASTVALEATTQSVI STGSVTVTATVTGSGGKTPTGSVTFSSGGKQIGVGTLSGGSGSATASITVSAAQLQVGSNSIVAQYSGDSALNTATATIS VAVTAAAGTAPTISGVANGASFQKTYAPGMVLSIFGTNLAGTAWVASTVPLAVQASGVSVKIGGVNAPLYYVSPGQINAQ IPYEAPVNQTVTLSVDNNGATASTTFTVSAAAPGLFTDASGGVAPTSTVARGGVMVLYVTGAGAMSPAIATGAAPAAGTA VAQLPAPVQAISVTVGGVTAPVQFAGIPTALVGVTQINVAVPATAPLGKQAVIVGVGGASSAAGSVVVTAQ >Mature_951_residues MVGVSGSNEVVPGLPISPATSMTKNVAISLLIFCAGLSAQPRLIKGAIQDARRTRMAGHVHPMASAANDIGAMDPATTLP AMTLVLRQSAAQQADLANLLAAQQDPASPEYHHWLTPEQYADRFGASADDVAKITAWLAQHNLQVTAVGRGRMSVTFTGT AGDVEQAFQVSMHRYSVNGRNHFANTAEPSLPAAMEPAIRSIHGLHDFLMKPRSVVHRAAVDPNYTSSSGNHYLAPDDIG TIYNVKALWNAGYDGTGQKIAIAGQTQVDVADIQKFRAKFGQTTPDPQMMLVPNTKDPGVSKDDLGEADLDLEWAGAVAP QATLLYVYSNDVMDAVLYAIDQNLAPVLSVSYGLCEPQTLKSDMLLMQTWAQQANAQGMTWINAAGDSGGADCVTGSSGN GAALAVDSPADIPEVTGIGGTTFSEAAGQYWNATNSASGGSATAYIPETVWNDSTSGSPAAGGGGASTVFTQPTWQTGLG VPSNGARNVPDISLNASAEHDGYLVYSGGQLSVYGGTSAGTPAFAGITALLNHYLVATGAQNAAGVGNVNPRLYALAQAG AGVFHDVTAGDNIITVTCGQRARNCTPGTYGYPAGQGYDLASGLGSIDAYNLVTTWHSGAASSSRAASTVALEATTQSVI STGSVTVTATVTGSGGKTPTGSVTFSSGGKQIGVGTLSGGSGSATASITVSAAQLQVGSNSIVAQYSGDSALNTATATIS VAVTAAAGTAPTISGVANGASFQKTYAPGMVLSIFGTNLAGTAWVASTVPLAVQASGVSVKIGGVNAPLYYVSPGQINAQ IPYEAPVNQTVTLSVDNNGATASTTFTVSAAAPGLFTDASGGVAPTSTVARGGVMVLYVTGAGAMSPAIATGAAPAAGTA VAQLPAPVQAISVTVGGVTAPVQFAGIPTALVGVTQINVAVPATAPLGKQAVIVGVGGASSAAGSVVVTAQ
Specific function: Unknown
COG id: COG4934
COG function: function code O; Predicted protease
Gene ontology:
Cell location: Periplasm [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the peptidase S53 family [H]
Homologues:
Organism=Homo sapiens, GI5729770, Length=599, Percent_Identity=26.7111853088481, Blast_Score=105, Evalue=2e-22,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR015366 - InterPro: IPR000209 - InterPro: IPR022398 - InterPro: IPR009020 [H]
Pfam domain/function: PF00082 Peptidase_S8; PF09286 Pro-kuma_activ [H]
EC number: =3.4.21.100 [H]
Molecular weight: Translated: 95389; Mature: 95389
Theoretical pI: Translated: 5.02; Mature: 5.02
Prosite motif: PS00300 SRP54
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVGVSGSNEVVPGLPISPATSMTKNVAISLLIFCAGLSAQPRLIKGAIQDARRTRMAGHV CCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHCCC HPMASAANDIGAMDPATTLPAMTLVLRQSAAQQADLANLLAAQQDPASPEYHHWLTPEQY CHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHH ADRFGASADDVAKITAWLAQHNLQVTAVGRGRMSVTFTGTAGDVEQAFQVSMHRYSVNGR HHHHCCCHHHHHHHHHHHHHCCEEEEEEECCEEEEEEECCCCCHHHHHHHHHHEEEECCC NHFANTAEPSLPAAMEPAIRSIHGLHDFLMKPRSVVHRAAVDPNYTSSSGNHYLAPDDIG CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHCCCCCCCCCCCCEEECCCCCC TIYNVKALWNAGYDGTGQKIAIAGQTQVDVADIQKFRAKFGQTTPDPQMMLVPNTKDPGV CEEEEEEEECCCCCCCCCEEEEECCCCCCHHHHHHHHHHHCCCCCCCCEEEECCCCCCCC SKDDLGEADLDLEWAGAVAPQATLLYVYSNDVMDAVLYAIDQNLAPVLSVSYGLCEPQTL CCCCCCCCCCCEEECCCCCCCEEEEEEECCHHHHHHHHHHCCCCCHHHHHHCCCCCCHHH KSDMLLMQTWAQQANAQGMTWINAAGDSGGADCVTGSSGNGAALAVDSPADIPEVTGIGG HHHHHHHHHHHHHCCCCCCEEEEECCCCCCCCEEECCCCCCEEEEECCCCCCCCCCCCCC TTFSEAAGQYWNATNSASGGSATAYIPETVWNDSTSGSPAAGGGGASTVFTQPTWQTGLG CCHHHHCCCCCCCCCCCCCCCEEEEECHHHCCCCCCCCCCCCCCCCCEEEECCCHHCCCC VPSNGARNVPDISLNASAEHDGYLVYSGGQLSVYGGTSAGTPAFAGITALLNHYLVATGA CCCCCCCCCCCEEEECCCCCCCEEEEECCEEEEECCCCCCCHHHHHHHHHHHHHEEEECC QNAAGVGNVNPRLYALAQAGAGVFHDVTAGDNIITVTCGQRARNCTPGTYGYPAGQGYDL CCCCCCCCCCCEEEEEECCCCCEEEEECCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCH ASGLGSIDAYNLVTTWHSGAASSSRAASTVALEATTQSVISTGSVTVTATVTGSGGKTPT HHCCCCCCEEEEEEEECCCCCCCCCCCEEEEEEEHHHHHHCCCCEEEEEEEECCCCCCCC GSVTFSSGGKQIGVGTLSGGSGSATASITVSAAQLQVGSNSIVAQYSGDSALNTATATIS CEEEECCCCCEEEEEEECCCCCCEEEEEEEEEEEEEECCCEEEEEECCCCCCCEEEEEEE VAVTAAAGTAPTISGVANGASFQKTYAPGMVLSIFGTNLAGTAWVASTVPLAVQASGVSV EEEEECCCCCCCHHHHCCCCCCHHHCCCCEEEEEECCCCCCCCHHHHCCCEEEEECCCEE KIGGVNAPLYYVSPGQINAQIPYEAPVNQTVTLSVDNNGATASTTFTVSAAAPGLFTDAS EECCCCCCEEEECCCCEEEECCCCCCCCCEEEEEECCCCCEEEEEEEEEECCCCEEECCC GGVAPTSTVARGGVMVLYVTGAGAMSPAIATGAAPAAGTAVAQLPAPVQAISVTVGGVTA CCCCCCHHHHCCCEEEEEEECCCCCCCHHHCCCCCCCCCCHHHCCCCCEEEEEEECCEEC PVQFAGIPTALVGVTQINVAVPATAPLGKQAVIVGVGGASSAAGSVVVTAQ CEEECCCCCHHEEEEEEEEEECCCCCCCCCEEEEEECCCCCCCCEEEEEEC >Mature Secondary Structure MVGVSGSNEVVPGLPISPATSMTKNVAISLLIFCAGLSAQPRLIKGAIQDARRTRMAGHV CCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHCCC HPMASAANDIGAMDPATTLPAMTLVLRQSAAQQADLANLLAAQQDPASPEYHHWLTPEQY CHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHH ADRFGASADDVAKITAWLAQHNLQVTAVGRGRMSVTFTGTAGDVEQAFQVSMHRYSVNGR HHHHCCCHHHHHHHHHHHHHCCEEEEEEECCEEEEEEECCCCCHHHHHHHHHHEEEECCC NHFANTAEPSLPAAMEPAIRSIHGLHDFLMKPRSVVHRAAVDPNYTSSSGNHYLAPDDIG CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHCCCCCCCCCCCCEEECCCCCC TIYNVKALWNAGYDGTGQKIAIAGQTQVDVADIQKFRAKFGQTTPDPQMMLVPNTKDPGV CEEEEEEEECCCCCCCCCEEEEECCCCCCHHHHHHHHHHHCCCCCCCCEEEECCCCCCCC SKDDLGEADLDLEWAGAVAPQATLLYVYSNDVMDAVLYAIDQNLAPVLSVSYGLCEPQTL CCCCCCCCCCCEEECCCCCCCEEEEEEECCHHHHHHHHHHCCCCCHHHHHHCCCCCCHHH KSDMLLMQTWAQQANAQGMTWINAAGDSGGADCVTGSSGNGAALAVDSPADIPEVTGIGG HHHHHHHHHHHHHCCCCCCEEEEECCCCCCCCEEECCCCCCEEEEECCCCCCCCCCCCCC TTFSEAAGQYWNATNSASGGSATAYIPETVWNDSTSGSPAAGGGGASTVFTQPTWQTGLG CCHHHHCCCCCCCCCCCCCCCEEEEECHHHCCCCCCCCCCCCCCCCCEEEECCCHHCCCC VPSNGARNVPDISLNASAEHDGYLVYSGGQLSVYGGTSAGTPAFAGITALLNHYLVATGA CCCCCCCCCCCEEEECCCCCCCEEEEECCEEEEECCCCCCCHHHHHHHHHHHHHEEEECC QNAAGVGNVNPRLYALAQAGAGVFHDVTAGDNIITVTCGQRARNCTPGTYGYPAGQGYDL CCCCCCCCCCCEEEEEECCCCCEEEEECCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCH ASGLGSIDAYNLVTTWHSGAASSSRAASTVALEATTQSVISTGSVTVTATVTGSGGKTPT HHCCCCCCEEEEEEEECCCCCCCCCCCEEEEEEEHHHHHHCCCCEEEEEEEECCCCCCCC GSVTFSSGGKQIGVGTLSGGSGSATASITVSAAQLQVGSNSIVAQYSGDSALNTATATIS CEEEECCCCCEEEEEEECCCCCCEEEEEEEEEEEEEECCCEEEEEECCCCCCCEEEEEEE VAVTAAAGTAPTISGVANGASFQKTYAPGMVLSIFGTNLAGTAWVASTVPLAVQASGVSV EEEEECCCCCCCHHHHCCCCCCHHHCCCCEEEEEECCCCCCCCHHHHCCCEEEEECCCEE KIGGVNAPLYYVSPGQINAQIPYEAPVNQTVTLSVDNNGATASTTFTVSAAAPGLFTDAS EECCCCCCEEEECCCCEEEECCCCCCCCCEEEEEECCCCCEEEEEEEEEECCCCEEECCC GGVAPTSTVARGGVMVLYVTGAGAMSPAIATGAAPAAGTAVAQLPAPVQAISVTVGGVTA CCCCCCHHHHCCCEEEEEEECCCCCCCHHHCCCCCCCCCCHHHCCCCCEEEEEEECCEEC PVQFAGIPTALVGVTQINVAVPATAPLGKQAVIVGVGGASSAAGSVVVTAQ CEEECCCCCHHEEEEEEEEEECCCCCCCCCEEEEEECCCCCCCCEEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 7929375; 8576087; 10488127; 11747435; 11323721 [H]