| Definition | Candidatus Solibacter usitatus Ellin6076 chromosome, complete genome. |
|---|---|
| Accession | NC_008536 |
| Length | 9,965,640 |
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The map label for this gene is 116622537
Identifier: 116622537
GI number: 116622537
Start: 4345414
End: 4346295
Strand: Direct
Name: 116622537
Synonym: Acid_3435
Alternate gene names: NA
Gene position: 4345414-4346295 (Clockwise)
Preceding gene: 116622536
Following gene: 116622540
Centisome position: 43.6
GC content: 62.59
Gene sequence:
>882_bases ATGCACGAGATTCGGACTACGATTCCGCCGGAATGCGTGGCGGAAGCCGCACGACTGGCCCATGCCGCCGGCATTGAGCG CGTAGTCATCGCCGAGGTTTTTGTGGAGGGTCCCAATGAACACCGGCGGCTGCTGAGCGTGGAAACTTCGACGCCCCAGG CTCGCGTTTTCGTGGAGAGCTTTCTCCACTCGCCTGTGTTGTCCGAGGCCGGGTGCACGCTGACCTCCCGCGAAGTGCGC GCGATTGTAGGTGGCGGGCCAGTGTCGAACCTGACGCGGCCGATGAGCGAACCCATTCCCGATATAATCCAGGACCTCTG GCAATTGAGCCACGTTACTCCGAGTTATATAGCGCGGGCAGCCGCGGGAGCGATTCTGTTGGCTACCGGCATTCTGGGCA ACGATCCGGTTGCAATCATCGCCGCGGCCTTATTTCTGCCGTTTCTGGCGCAGGTGCTCGCCTTGAGTTTGGGCGTGTGG AGCCGTGACCGCCGGCTGGTGCTGCACGGAGCGCGGGCGTTAGCGACCAGCACGGTACTGGCCTTGGGCGCCGGAGCGGC GGTCGCGTGGATTCAAGGCGGGCCGATTCTCTACGCAGGGTTCAGGAGTCCCCTGAACAACTTTTTCTTGTCGTGCATCA TCGGAGTTACAGCGGGCCTGTCTACAGCGGACGATACCGGCCGGCGTTACCTGCTGGCGGTGGCAGCCGCCGTACAACTG GCGATCTTCCCAGTCTGGCTGGGAGCCGCGGCAGTCCTGGGAACGCCGGCCCACGATATCCTCTACTCCAGGATTTTGAG TTTTGGCATCAACCTGACAACGATCACGGTCGCGACGCTTGCGGCCTACGCTTCGCTCCACCTGCGCTCGGAGAGACTCT AG
Upstream 100 bases:
>100_bases AGGGTTAGTAATGCGGCTAACGTAACTAAACTGGAATCCGTGCGCTAATCGAACCTGTTGCGGACATCGTTCATCGGTCC GTAACAGGGAGCATTCCACG
Downstream 100 bases:
>100_bases GATTTCCTGGCAGACTTCTTGGTAGATTTTTTGGTCGATTTCTTGGCGGCCTTCTTCTTGGGAATCTTGGCTCCGGATTT GCGCGCTTCGCTGAGCGCAA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 293; Mature: 293
Protein sequence:
>293_residues MHEIRTTIPPECVAEAARLAHAAGIERVVIAEVFVEGPNEHRRLLSVETSTPQARVFVESFLHSPVLSEAGCTLTSREVR AIVGGGPVSNLTRPMSEPIPDIIQDLWQLSHVTPSYIARAAAGAILLATGILGNDPVAIIAAALFLPFLAQVLALSLGVW SRDRRLVLHGARALATSTVLALGAGAAVAWIQGGPILYAGFRSPLNNFFLSCIIGVTAGLSTADDTGRRYLLAVAAAVQL AIFPVWLGAAAVLGTPAHDILYSRILSFGINLTTITVATLAAYASLHLRSERL
Sequences:
>Translated_293_residues MHEIRTTIPPECVAEAARLAHAAGIERVVIAEVFVEGPNEHRRLLSVETSTPQARVFVESFLHSPVLSEAGCTLTSREVR AIVGGGPVSNLTRPMSEPIPDIIQDLWQLSHVTPSYIARAAAGAILLATGILGNDPVAIIAAALFLPFLAQVLALSLGVW SRDRRLVLHGARALATSTVLALGAGAAVAWIQGGPILYAGFRSPLNNFFLSCIIGVTAGLSTADDTGRRYLLAVAAAVQL AIFPVWLGAAAVLGTPAHDILYSRILSFGINLTTITVATLAAYASLHLRSERL >Mature_293_residues MHEIRTTIPPECVAEAARLAHAAGIERVVIAEVFVEGPNEHRRLLSVETSTPQARVFVESFLHSPVLSEAGCTLTSREVR AIVGGGPVSNLTRPMSEPIPDIIQDLWQLSHVTPSYIARAAAGAILLATGILGNDPVAIIAAALFLPFLAQVLALSLGVW SRDRRLVLHGARALATSTVLALGAGAAVAWIQGGPILYAGFRSPLNNFFLSCIIGVTAGLSTADDTGRRYLLAVAAAVQL AIFPVWLGAAAVLGTPAHDILYSRILSFGINLTTITVATLAAYASLHLRSERL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 30903; Mature: 30903
Theoretical pI: Translated: 7.67; Mature: 7.67
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 0.7 %Met (Translated Protein) 1.7 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 0.7 %Met (Mature Protein) 1.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MHEIRTTIPPECVAEAARLAHAAGIERVVIAEVFVEGPNEHRRLLSVETSTPQARVFVES CCCCCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCHHHEEEEEECCCCHHHHHHHH FLHSPVLSEAGCTLTSREVRAIVGGGPVSNLTRPMSEPIPDIIQDLWQLSHVTPSYIARA HHCCCHHHHCCCCEEHHHHHHEECCCCHHHHHHHHCCCHHHHHHHHHHHHCCCHHHHHHH AAGAILLATGILGNDPVAIIAAALFLPFLAQVLALSLGVWSRDRRLVLHGARALATSTVL HHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEHHHHHHHHHHHH ALGAGAAVAWIQGGPILYAGFRSPLNNFFLSCIIGVTAGLSTADDTGRRYLLAVAAAVQL HHCCCCEEEEECCCCEEEECHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHH AIFPVWLGAAAVLGTPAHDILYSRILSFGINLTTITVATLAAYASLHLRSERL HHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure MHEIRTTIPPECVAEAARLAHAAGIERVVIAEVFVEGPNEHRRLLSVETSTPQARVFVES CCCCCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCHHHEEEEEECCCCHHHHHHHH FLHSPVLSEAGCTLTSREVRAIVGGGPVSNLTRPMSEPIPDIIQDLWQLSHVTPSYIARA HHCCCHHHHCCCCEEHHHHHHEECCCCHHHHHHHHCCCHHHHHHHHHHHHCCCHHHHHHH AAGAILLATGILGNDPVAIIAAALFLPFLAQVLALSLGVWSRDRRLVLHGARALATSTVL HHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEHHHHHHHHHHHH ALGAGAAVAWIQGGPILYAGFRSPLNNFFLSCIIGVTAGLSTADDTGRRYLLAVAAAVQL HHCCCCEEEEECCCCEEEECHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHH AIFPVWLGAAAVLGTPAHDILYSRILSFGINLTTITVATLAAYASLHLRSERL HHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA