| Definition | Candidatus Solibacter usitatus Ellin6076 chromosome, complete genome. |
|---|---|
| Accession | NC_008536 |
| Length | 9,965,640 |
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The map label for this gene is 116622436
Identifier: 116622436
GI number: 116622436
Start: 4220615
End: 4221598
Strand: Reverse
Name: 116622436
Synonym: Acid_3334
Alternate gene names: NA
Gene position: 4221598-4220615 (Counterclockwise)
Preceding gene: 116622439
Following gene: 116622432
Centisome position: 42.36
GC content: 61.28
Gene sequence:
>984_bases ATGAGCGTCAAAATACTGCTCCTGATCCTGGCCGCCCTGCCCCTGCCGGCTGCCTCAATTCACATCTACGTCGCCAACAG CGATGACAACAAAATCAGCGTTATCGATCCCACGACAGATCGTGTTTCCAGCGAGATCCCTGTGTCGCCCAACCCGCACG GCATCGTCCCCTCGCCGGATGGAAAGCGTTTTTACGTCTCCAGCGAGAGCAAAGACCTGCTCGATGTGGTGGATCGCAAG ACCCTGGCGATCATCGGCCGCGTGCCCCTCGGCCAAAGGCCCAATAACGTCGCCATCACGCCCGATGGCAAGCAGGTCTA CATCTGCATTCGCGCGGAATCCTGGGTGGACATCGTGGACACTGCGTCGCTCCAGCGCGTGAAGCGCGTCCCCGTTGGAA AAGGGCCGCACAACGTGTACCGCACACCCGACGGCCTGCGCATGATCGCCACTTCGATGGATGAGAACAAGCTCTCCGTG ATCAACGTCAAGAGCCAGGAAGTGGAATTCGAGATCCCGGCCGGCGGAGTGCCGCGCCCGCTCGTCATCGATGCCAACCC CGATCGCTCCATCAACCGCCTCTTCGTGCAGCTCTCCAACCTGCACGGTTTTGCCGTGATCGACTGGGCGTCGCGCAAGG TCGTCGGACGCGTGATACTGCCGGAAGCCCCCGCCGGAGCCCGCCCGCTGATTCCTGAGACCTTTTCGCACGGCATGGCC ATCTCGCCGGACCACAAAACGCTCTGGGTTACTAGCCTGCTCGACAACTCGGTCTCCGTCTTTTCCCTGCCCCAATTGAA GCGCCTTCAAACGATCCCCGTCGGCCGCGGTCCGGACTGGATGACTTTCACGCCCGATGGCACGCGCTGCTACGTGTCCA ACGCCGGCAGCAACACCGTCTCGTCGATCGACGCCGTGAATTTCAAGGAGTTGGTCAAGATCTCCGTCGGCAAGGTCCCC AAACGCATCATCACCGCCGACTGA
Upstream 100 bases:
>100_bases CTGGTGATGGAAAGTCCGCTGTCATACCGTTGTATTCGATATGAGTAAGAGAATTCCCAACTCCACGTCGCGGGTATACA CTGTCCACCAGGGAGGGTTG
Downstream 100 bases:
>100_bases CATCAACCATCTGTGCATATGTTTGCTCGCAGAATTCCCGAGTCAACGAGCCGCGACCGCAAGGGAGCTATCTCGCCGTG GGGCAGCCCATCCTGGCTGT
Product: YVTN beta-propeller repeat-containing protein
Products: NA
Alternate protein names: 40-Residue YVTN Family Beta-Propeller Repeat Protein; Surface Antigen Gene; Serine/Threonine Protein Kinase; Surface Layer Protein; Cell Surface Protein; Yvtn Beta-Propeller Repeat-Containing Protein; 40-Residue Yvtn Family Beta-Propeller Repeat Protein; YVTN Family Beta-Propeller Repeat Protein; Beta-Propeller Repeat-Containing Protein; Surface Antigen; Triple Helix Repeat-Containing Collagen; Signal Peptide Protein; Yvtn Beta-Propeller Repeat Family Protein; Outer Membrane Protein; Glycine-Rich Cell Wall Protein; YVTN Beta-Propeller Repeat Family Protein; IPT/TIG Domain Protein; Transmembrane Protein; Signal Peptide; Beta-Propeller Fold Protein; LOW QUALITY PROTEIN Surface Antigen Protein; Surface Antigen-Like Protein; Alkaline Serine Protease; Cytochrome D1 Heme Subunit; Cytochrome D1 Heme Region; YVTN Family Beta-Propeller Repeat-Containing Protein; Alpha-1 2-Mannosidase; SGL Domain-Containing Protein; Secreted Protein; YVTN Family Beta-Propeller Repeat Family Protein
Number of amino acids: Translated: 327; Mature: 326
Protein sequence:
>327_residues MSVKILLLILAALPLPAASIHIYVANSDDNKISVIDPTTDRVSSEIPVSPNPHGIVPSPDGKRFYVSSESKDLLDVVDRK TLAIIGRVPLGQRPNNVAITPDGKQVYICIRAESWVDIVDTASLQRVKRVPVGKGPHNVYRTPDGLRMIATSMDENKLSV INVKSQEVEFEIPAGGVPRPLVIDANPDRSINRLFVQLSNLHGFAVIDWASRKVVGRVILPEAPAGARPLIPETFSHGMA ISPDHKTLWVTSLLDNSVSVFSLPQLKRLQTIPVGRGPDWMTFTPDGTRCYVSNAGSNTVSSIDAVNFKELVKISVGKVP KRIITAD
Sequences:
>Translated_327_residues MSVKILLLILAALPLPAASIHIYVANSDDNKISVIDPTTDRVSSEIPVSPNPHGIVPSPDGKRFYVSSESKDLLDVVDRK TLAIIGRVPLGQRPNNVAITPDGKQVYICIRAESWVDIVDTASLQRVKRVPVGKGPHNVYRTPDGLRMIATSMDENKLSV INVKSQEVEFEIPAGGVPRPLVIDANPDRSINRLFVQLSNLHGFAVIDWASRKVVGRVILPEAPAGARPLIPETFSHGMA ISPDHKTLWVTSLLDNSVSVFSLPQLKRLQTIPVGRGPDWMTFTPDGTRCYVSNAGSNTVSSIDAVNFKELVKISVGKVP KRIITAD >Mature_326_residues SVKILLLILAALPLPAASIHIYVANSDDNKISVIDPTTDRVSSEIPVSPNPHGIVPSPDGKRFYVSSESKDLLDVVDRKT LAIIGRVPLGQRPNNVAITPDGKQVYICIRAESWVDIVDTASLQRVKRVPVGKGPHNVYRTPDGLRMIATSMDENKLSVI NVKSQEVEFEIPAGGVPRPLVIDANPDRSINRLFVQLSNLHGFAVIDWASRKVVGRVILPEAPAGARPLIPETFSHGMAI SPDHKTLWVTSLLDNSVSVFSLPQLKRLQTIPVGRGPDWMTFTPDGTRCYVSNAGSNTVSSIDAVNFKELVKISVGKVPK RIITAD
Specific function: Unknown
COG id: COG3391
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 35579; Mature: 35448
Theoretical pI: Translated: 9.60; Mature: 9.60
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 2.1 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 1.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSVKILLLILAALPLPAASIHIYVANSDDNKISVIDPTTDRVSSEIPVSPNPHGIVPSPD CCHHHEEHHHHHCCCCCEEEEEEEEECCCCEEEEECCCHHHHCCCCCCCCCCCCCCCCCC GKRFYVSSESKDLLDVVDRKTLAIIGRVPLGQRPNNVAITPDGKQVYICIRAESWVDIVD CCEEEEECCCCHHHHHHCCCEEEEEECCCCCCCCCEEEECCCCCEEEEEEECCCCEEHHH TASLQRVKRVPVGKGPHNVYRTPDGLRMIATSMDENKLSVINVKSQEVEFEIPAGGVPRP HHHHHHHHCCCCCCCCCCCCCCCCCEEEEEECCCCCCEEEEEEECCEEEEECCCCCCCCC LVIDANPDRSINRLFVQLSNLHGFAVIDWASRKVVGRVILPEAPAGARPLIPETFSHGMA EEEECCCCCCHHEEEEEEECCCCEEEEEECCCEEEEEEEECCCCCCCCCCCCHHHCCCEE ISPDHKTLWVTSLLDNSVSVFSLPQLKRLQTIPVGRGPDWMTFTPDGTRCYVSNAGSNTV ECCCCCEEEEEEHHCCCEEEEECCCHHHHEECCCCCCCCCEEECCCCCEEEEECCCCCCH SSIDAVNFKELVKISVGKVPKRIITAD HHCCCCCHHHHHHHHHCCCCCEEECCC >Mature Secondary Structure SVKILLLILAALPLPAASIHIYVANSDDNKISVIDPTTDRVSSEIPVSPNPHGIVPSPD CHHHEEHHHHHCCCCCEEEEEEEEECCCCEEEEECCCHHHHCCCCCCCCCCCCCCCCCC GKRFYVSSESKDLLDVVDRKTLAIIGRVPLGQRPNNVAITPDGKQVYICIRAESWVDIVD CCEEEEECCCCHHHHHHCCCEEEEEECCCCCCCCCEEEECCCCCEEEEEEECCCCEEHHH TASLQRVKRVPVGKGPHNVYRTPDGLRMIATSMDENKLSVINVKSQEVEFEIPAGGVPRP HHHHHHHHCCCCCCCCCCCCCCCCCEEEEEECCCCCCEEEEEEECCEEEEECCCCCCCCC LVIDANPDRSINRLFVQLSNLHGFAVIDWASRKVVGRVILPEAPAGARPLIPETFSHGMA EEEECCCCCCHHEEEEEEECCCCEEEEEECCCEEEEEEEECCCCCCCCCCCCHHHCCCEE ISPDHKTLWVTSLLDNSVSVFSLPQLKRLQTIPVGRGPDWMTFTPDGTRCYVSNAGSNTV ECCCCCEEEEEEHHCCCEEEEECCCHHHHEECCCCCCCCCEEECCCCCEEEEECCCCCCH SSIDAVNFKELVKISVGKVPKRIITAD HHCCCCCHHHHHHHHHCCCCCEEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA