| Definition | Candidatus Solibacter usitatus Ellin6076 chromosome, complete genome. |
|---|---|
| Accession | NC_008536 |
| Length | 9,965,640 |
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The map label for this gene is 116622439
Identifier: 116622439
GI number: 116622439
Start: 4222708
End: 4223646
Strand: Reverse
Name: 116622439
Synonym: Acid_3337
Alternate gene names: NA
Gene position: 4223646-4222708 (Counterclockwise)
Preceding gene: 116622440
Following gene: 116622436
Centisome position: 42.38
GC content: 56.44
Gene sequence:
>939_bases ATGCCGGCTGCTGCCCGCAAAACTGCGAACGGCTCCAGACCCGGCATCGAAATCGTGCGGCGCATTATCGTCCAGTACCT CGGTAGCAAGCCCGCGCGTATTCACCGGGAGACAGCCGGGCGAAGCAACCTGGTGTTTTCCGTGGATCACGATAGCGGGC AGTTTATCGTCCGTATTAACTCGAACCCGGCCAAATTGGACCCCTTTCTAAAGGAACAGTGGGCCACCCGCCGCGCCCGT AAAGCCGGTATCCCGGTTGCCGAGATCCTCGAGGTCGGCAACGATCCCGTTCCGCATATGATTCTTCGGAAAGCCGCCGG TAAACCAGCGACCTCCCATCCGAAGCGAATGGGAGTGATTCGAGAACTAGGTCACTTCGCCGCTCACATCAACTCGATCC AAACGAACGGGTTCGGCAGCACGTTTGACTGGTCCCCCAAGGAGCTTTCGAAGAATCCCGACTGGCTGGAGTTCTTGCGA AGCGAAATCAAACTCGATCACCGGCTTCGCGTTCTCAACCGGCTGCGGATGGTCAACAACGAAAAGCTGGAAACACTTCG CCGTCTGCTCGAAAATGCCGGTGACAAGCGCCGCAGCCCGCGATTAACCCACGGCGATCTCCGCCTCAAGAACGTTCTGG TCGATGAAAAAGGTAGCATCTCCGCTATTCTCGATTGGGAAACCTGCACTTCCAACCTGGCGCCCGAATGGGAGTTAGCA CTGGCGCTCCATGATCTTTCCATCGACGAGAAGCAGGAGTTTCTTTTCGGTTACGGGCTCAACACAAAGGTCGTCGCCGC AATGGCTCCCGTAGTCAAGGCTTTGAACATCATCAACTACGCTCCGCAGATCGAGCGGTTCGAAAAGAGGCAAGACACAA AACATCTGGAGATGTATCGCCTGCGGCTTAGCGGCGCTCTGGAACTGTACTCGCTTTAG
Upstream 100 bases:
>100_bases TCGATTTTCACGGCGTCCACGGCACCCTCAGGTTGAAGAATTCCTTTGAGCTGGGAAACCTGCTCTTCGAGGTTGCGAAC CTGCTCGGGGAGAACGCGTG
Downstream 100 bases:
>100_bases GCCCGGCCCGTTGATTTACTGGTCGCGCCTTGCGCCCGGCGCCTTGGAATCTTTAACCTTGCGGCCGGTGTCCTGATCGT CCATCGTGCGGCTTGCCTCG
Product: aminoglycoside phosphotransferase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 312; Mature: 311
Protein sequence:
>312_residues MPAAARKTANGSRPGIEIVRRIIVQYLGSKPARIHRETAGRSNLVFSVDHDSGQFIVRINSNPAKLDPFLKEQWATRRAR KAGIPVAEILEVGNDPVPHMILRKAAGKPATSHPKRMGVIRELGHFAAHINSIQTNGFGSTFDWSPKELSKNPDWLEFLR SEIKLDHRLRVLNRLRMVNNEKLETLRRLLENAGDKRRSPRLTHGDLRLKNVLVDEKGSISAILDWETCTSNLAPEWELA LALHDLSIDEKQEFLFGYGLNTKVVAAMAPVVKALNIINYAPQIERFEKRQDTKHLEMYRLRLSGALELYSL
Sequences:
>Translated_312_residues MPAAARKTANGSRPGIEIVRRIIVQYLGSKPARIHRETAGRSNLVFSVDHDSGQFIVRINSNPAKLDPFLKEQWATRRAR KAGIPVAEILEVGNDPVPHMILRKAAGKPATSHPKRMGVIRELGHFAAHINSIQTNGFGSTFDWSPKELSKNPDWLEFLR SEIKLDHRLRVLNRLRMVNNEKLETLRRLLENAGDKRRSPRLTHGDLRLKNVLVDEKGSISAILDWETCTSNLAPEWELA LALHDLSIDEKQEFLFGYGLNTKVVAAMAPVVKALNIINYAPQIERFEKRQDTKHLEMYRLRLSGALELYSL >Mature_311_residues PAAARKTANGSRPGIEIVRRIIVQYLGSKPARIHRETAGRSNLVFSVDHDSGQFIVRINSNPAKLDPFLKEQWATRRARK AGIPVAEILEVGNDPVPHMILRKAAGKPATSHPKRMGVIRELGHFAAHINSIQTNGFGSTFDWSPKELSKNPDWLEFLRS EIKLDHRLRVLNRLRMVNNEKLETLRRLLENAGDKRRSPRLTHGDLRLKNVLVDEKGSISAILDWETCTSNLAPEWELAL ALHDLSIDEKQEFLFGYGLNTKVVAAMAPVVKALNIINYAPQIERFEKRQDTKHLEMYRLRLSGALELYSL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 35383; Mature: 35252
Theoretical pI: Translated: 10.54; Mature: 10.54
Prosite motif: PS00109 PROTEIN_KINASE_TYR
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 2.2 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 1.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPAAARKTANGSRPGIEIVRRIIVQYLGSKPARIHRETAGRSNLVFSVDHDSGQFIVRIN CCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCHHHHHHHCCCCCEEEEEECCCCEEEEEEC SNPAKLDPFLKEQWATRRARKAGIPVAEILEVGNDPVPHMILRKAAGKPATSHPKRMGVI CCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHCCCCCHHHHHHHHHCCCCCCCCHHHHHHH RELGHFAAHINSIQTNGFGSTFDWSPKELSKNPDWLEFLRSEIKLDHRLRVLNRLRMVNN HHHHHHHHHHHHHCCCCCCCCCCCCHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCC EKLETLRRLLENAGDKRRSPRLTHGDLRLKNVLVDEKGSISAILDWETCTSNLAPEWELA HHHHHHHHHHHCCCCCCCCCCCCCCCCEEEHHEECCCCCEEEEEEHHHHHCCCCCCHHHE LALHDLSIDEKQEFLFGYGLNTKVVAAMAPVVKALNIINYAPQIERFEKRQDTKHLEMYR EEEECCCCCCHHHHHEECCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCHHHHHHHH LRLSGALELYSL HHHHCCCHHHCC >Mature Secondary Structure PAAARKTANGSRPGIEIVRRIIVQYLGSKPARIHRETAGRSNLVFSVDHDSGQFIVRIN CCCCCCCCCCCCCCHHHHHHHHHHHHCCCCHHHHHHHCCCCCEEEEEECCCCEEEEEEC SNPAKLDPFLKEQWATRRARKAGIPVAEILEVGNDPVPHMILRKAAGKPATSHPKRMGVI CCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHCCCCCHHHHHHHHHCCCCCCCCHHHHHHH RELGHFAAHINSIQTNGFGSTFDWSPKELSKNPDWLEFLRSEIKLDHRLRVLNRLRMVNN HHHHHHHHHHHHHCCCCCCCCCCCCHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCC EKLETLRRLLENAGDKRRSPRLTHGDLRLKNVLVDEKGSISAILDWETCTSNLAPEWELA HHHHHHHHHHHCCCCCCCCCCCCCCCCEEEHHEECCCCCEEEEEEHHHHHCCCCCCHHHE LALHDLSIDEKQEFLFGYGLNTKVVAAMAPVVKALNIINYAPQIERFEKRQDTKHLEMYR EEEECCCCCCHHHHHEECCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCHHHHHHHH LRLSGALELYSL HHHHCCCHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA