Click here to switch to the map view.

The map label for this gene is 116622384

Identifier: 116622384

GI number: 116622384

Start: 4147932

End: 4148726

Strand: Reverse

Name: 116622384

Synonym: Acid_3278

Alternate gene names: NA

Gene position: 4148726-4147932 (Counterclockwise)

Preceding gene: 116622386

Following gene: 116622366

Centisome position: 41.63

GC content: 62.26

Gene sequence:

>795_bases
TTGCTTCGCTTATTCACTCTCGCGCTCATTTCGGGCGCGAGTATGCTGGTGGGCGCTACCCAGCCGCACCCTCCCGGCCG
CGGCCTGGTATTTGAACCCAATCGCGGCCAGGCGCCCGTGGACGCTCAATGGGTCGCGCAAGGTCCGTCCTATAAGGTTT
TGCTGACCGGCGACGGGCTCACGATGATGGTCCGCGAAAGGAATTCGAGGCCGAAGTACAGCGCGGTGCGCATGAAACTT
GTGGGCGGCCGCCCATGGAAAGCTCTCGCCGGCTTCGACGCTACCGGTGAAGTGACCAACTACCTCCGAGGCAATGAGAC
GAAAGTAACGAGAATCCCGCACTACGCCAAAGTGCGCGCCGCCGGCGTGTACGAGGGAATCGACCTGGTCTTCTACGATC
ATGGCGGCAACCTGGAGTACGACTTTGAAGTCGCCGCCGGCGCCGACCCGGGCAACATTGTTCTGGCGTTCGATGGCGTG
CAGCGAATGCGCATCGATAACCGGTCAGGCGAGTTGATCCTGACCACCTGGGGCGGCTCCGAACTGCGCCATGCCCGCCC
GCTGGTGTACCAACAGGTGGGAAATGAGCGCGTCGAGGTCGCCGGAGGATACGAACTGCTGGACAACGGCCGCGCGGCCT
TCACGCTCGCGCACTACGATAGCCGCCATCCTCTGATCATCGATCCGGCAATCGCTATTGAACGGATTTATTTGAGCTCC
CCGCGGGAGGTTCTCCAGCGGAAGGAGGTTGGTGGGGGCGGTGGGCGACCGCTCCCACCTACGCTTCGAAGATAA

Upstream 100 bases:

>100_bases
TACTTTCCAAGCCGGTTCACGCACGTACCTAGTGAGCACCTGGAAAAGCCGCGAGATAGACGGTTACCCAAGCTCCAATC
CACTCGGAGGATGACGCCCC

Downstream 100 bases:

>100_bases
GCACCGCGCGTCCCAGGTGAATTTCGTCGCCGTCTTCCAATCTCGTTCCGCGCGTGTCGCGCGGCACCTCGCGGCTGACT
CCGTCGCGCACGATTCGCGT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 264; Mature: 264

Protein sequence:

>264_residues
MLRLFTLALISGASMLVGATQPHPPGRGLVFEPNRGQAPVDAQWVAQGPSYKVLLTGDGLTMMVRERNSRPKYSAVRMKL
VGGRPWKALAGFDATGEVTNYLRGNETKVTRIPHYAKVRAAGVYEGIDLVFYDHGGNLEYDFEVAAGADPGNIVLAFDGV
QRMRIDNRSGELILTTWGGSELRHARPLVYQQVGNERVEVAGGYELLDNGRAAFTLAHYDSRHPLIIDPAIAIERIYLSS
PREVLQRKEVGGGGGRPLPPTLRR

Sequences:

>Translated_264_residues
MLRLFTLALISGASMLVGATQPHPPGRGLVFEPNRGQAPVDAQWVAQGPSYKVLLTGDGLTMMVRERNSRPKYSAVRMKL
VGGRPWKALAGFDATGEVTNYLRGNETKVTRIPHYAKVRAAGVYEGIDLVFYDHGGNLEYDFEVAAGADPGNIVLAFDGV
QRMRIDNRSGELILTTWGGSELRHARPLVYQQVGNERVEVAGGYELLDNGRAAFTLAHYDSRHPLIIDPAIAIERIYLSS
PREVLQRKEVGGGGGRPLPPTLRR
>Mature_264_residues
MLRLFTLALISGASMLVGATQPHPPGRGLVFEPNRGQAPVDAQWVAQGPSYKVLLTGDGLTMMVRERNSRPKYSAVRMKL
VGGRPWKALAGFDATGEVTNYLRGNETKVTRIPHYAKVRAAGVYEGIDLVFYDHGGNLEYDFEVAAGADPGNIVLAFDGV
QRMRIDNRSGELILTTWGGSELRHARPLVYQQVGNERVEVAGGYELLDNGRAAFTLAHYDSRHPLIIDPAIAIERIYLSS
PREVLQRKEVGGGGGRPLPPTLRR

Specific function: Unknown

COG id: COG3291

COG function: function code R; FOG: PKD repeat

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 28932; Mature: 28932

Theoretical pI: Translated: 9.76; Mature: 9.76

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLRLFTLALISGASMLVGATQPHPPGRGLVFEPNRGQAPVDAQWVAQGPSYKVLLTGDGL
CEEEEEEEHHCCCEEEEECCCCCCCCCCEEECCCCCCCCCCCEEEECCCCEEEEEECCCE
TMMVRERNSRPKYSAVRMKLVGGRPWKALAGFDATGEVTNYLRGNETKVTRIPHYAKVRA
EEEEEECCCCCCEEEEEEEEECCCCCHHHCCCCCCCHHHHHHCCCCEEEEECCCHHEEEE
AGVYEGIDLVFYDHGGNLEYDFEVAAGADPGNIVLAFDGVQRMRIDNRSGELILTTWGGS
CCEECCEEEEEEECCCCEEEEEEEECCCCCCCEEEEECCCEEEEEECCCCCEEEEECCCC
ELRHARPLVYQQVGNERVEVAGGYELLDNGRAAFTLAHYDSRHPLIIDPAIAIERIYLSS
CHHHCCCHHHHHCCCCEEEEECCEEEECCCCEEEEEEEECCCCCEEECCHHEEEEEECCC
PREVLQRKEVGGGGGRPLPPTLRR
HHHHHHHHHCCCCCCCCCCCCCCC
>Mature Secondary Structure
MLRLFTLALISGASMLVGATQPHPPGRGLVFEPNRGQAPVDAQWVAQGPSYKVLLTGDGL
CEEEEEEEHHCCCEEEEECCCCCCCCCCEEECCCCCCCCCCCEEEECCCCEEEEEECCCE
TMMVRERNSRPKYSAVRMKLVGGRPWKALAGFDATGEVTNYLRGNETKVTRIPHYAKVRA
EEEEEECCCCCCEEEEEEEEECCCCCHHHCCCCCCCHHHHHHCCCCEEEEECCCHHEEEE
AGVYEGIDLVFYDHGGNLEYDFEVAAGADPGNIVLAFDGVQRMRIDNRSGELILTTWGGS
CCEECCEEEEEEECCCCEEEEEEEECCCCCCCEEEEECCCEEEEEECCCCCEEEEECCCC
ELRHARPLVYQQVGNERVEVAGGYELLDNGRAAFTLAHYDSRHPLIIDPAIAIERIYLSS
CHHHCCCHHHHHCCCCEEEEECCEEEECCCCEEEEEEEECCCCCEEECCHHEEEEEECCC
PREVLQRKEVGGGGGRPLPPTLRR
HHHHHHHHHCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA