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The map label for this gene is rsgA2 [H]

Identifier: 116622386

GI number: 116622386

Start: 4152774

End: 4153835

Strand: Reverse

Name: rsgA2 [H]

Synonym: Acid_3280

Alternate gene names: 116622386

Gene position: 4153835-4152774 (Counterclockwise)

Preceding gene: 116622391

Following gene: 116622384

Centisome position: 41.68

GC content: 66.95

Gene sequence:

>1062_bases
ATGTGTCTCGATTTGCTCGGCGCTACGCCTGAACTGCGTGCCGCCGTTCCTTCTCCCCGCCTCCTCGCGCGCGTGCTTCT
TTCGCAGCGCGATCAATATAAACTGCTTTCCGAAGCCGGCGAGCTCGATGCCGAACCCGCCGGCGTGCTGTGGCACACCG
CCCCGTCCCGCGCGGACATGCCCGTAGTCGGCGATTGGGTCGCGGCCCGCGTCGTCGGCCCCGGCCAGGCCATCGTTGAG
GGTGTGCTGCCGCGTCGCACCTTTTTCTCACGCCGGGCGCCCGGACGCCGCGAAGATCGCCAGCCCATCGCGGCTAATAT
CGACCTCGTCTTCCTTGTCTGCGGCCTCGACGGCGATTTCAATCTGCGCCGCCTGGAACGCTACCTGACGCTTGCCGCCG
AAAGCGGCGCATCCCCAATCGTGGTCCTCAACAAGAGCGATCTCTGCGACGATCTTCCGGCGCGGTTCGCCGAGACTGTG
CAGGTCTCTGGCGCCGCTCCCATCGTCACCATTCATACCCGCGATGAAGCAGGGATCGCCCCACTCCGCGCCTGGCTCGC
TCCCGGCCGCACGGTCGCACTGCTGGGCTCCTCGGGCGTGGGCAAATCCTCGATCGTCAATTGCCTCGCGGGCGACGCCA
GGCTCCGCACCGCGGAAGTCCGCGAGTCCGATAGCCGGGGCCGCCATACGACAACGCACCGCGAGCTGATCGTCCTCCCC
GGGTCCGGACTGCTGATCGATACGCCCGGTATGCGCGAGCTCCAACTCTGGGCTGGAGAGGACGCGCTCGACCAGGTCTT
CGACGAGATCGCCGCGCTCGCCGCCGGCTGCCGCTTCGGCGATTGCAGCCACGTCGCCGAGGTCGGATGCGCCGTGCAGC
AAGCCCTCGCCGGCGGCACTCTCGCACCCGAGCGCTGGCACAGCTACCTCAAACTCCGCGCTGAGGTCCGCCGTCACGAA
TCCATGGCGGACCCGCTGCTCGCCGCGCAGCAAAAGCGCAAACTCCGCAACATGCATCAATCCATCAAGGAGATCTACAA
ATCGCGGAAACACCGGCCGTGA

Upstream 100 bases:

>100_bases
CGCATGAAGCTATGCTATCTTGAATCGTCTGCCTATGACTGTCCGCTAGTTTTGCCGCGGCCCACAACCCGTCCACCGCA
ATCCCTGGAGCGAACAGTCC

Downstream 100 bases:

>100_bases
TTTAGAAGCTTGGTTTTCTTCTTGGCGTTACTCTGCGGCTTGGCGGCTTTGCGAGAGACTGAGAATTTCTCGCAGAGACG
CAGAGCCGCAGAGTCACGCC

Product: ribosome small subunit-dependent GTPase A

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 353; Mature: 353

Protein sequence:

>353_residues
MCLDLLGATPELRAAVPSPRLLARVLLSQRDQYKLLSEAGELDAEPAGVLWHTAPSRADMPVVGDWVAARVVGPGQAIVE
GVLPRRTFFSRRAPGRREDRQPIAANIDLVFLVCGLDGDFNLRRLERYLTLAAESGASPIVVLNKSDLCDDLPARFAETV
QVSGAAPIVTIHTRDEAGIAPLRAWLAPGRTVALLGSSGVGKSSIVNCLAGDARLRTAEVRESDSRGRHTTTHRELIVLP
GSGLLIDTPGMRELQLWAGEDALDQVFDEIAALAAGCRFGDCSHVAEVGCAVQQALAGGTLAPERWHSYLKLRAEVRRHE
SMADPLLAAQQKRKLRNMHQSIKEIYKSRKHRP

Sequences:

>Translated_353_residues
MCLDLLGATPELRAAVPSPRLLARVLLSQRDQYKLLSEAGELDAEPAGVLWHTAPSRADMPVVGDWVAARVVGPGQAIVE
GVLPRRTFFSRRAPGRREDRQPIAANIDLVFLVCGLDGDFNLRRLERYLTLAAESGASPIVVLNKSDLCDDLPARFAETV
QVSGAAPIVTIHTRDEAGIAPLRAWLAPGRTVALLGSSGVGKSSIVNCLAGDARLRTAEVRESDSRGRHTTTHRELIVLP
GSGLLIDTPGMRELQLWAGEDALDQVFDEIAALAAGCRFGDCSHVAEVGCAVQQALAGGTLAPERWHSYLKLRAEVRRHE
SMADPLLAAQQKRKLRNMHQSIKEIYKSRKHRP
>Mature_353_residues
MCLDLLGATPELRAAVPSPRLLARVLLSQRDQYKLLSEAGELDAEPAGVLWHTAPSRADMPVVGDWVAARVVGPGQAIVE
GVLPRRTFFSRRAPGRREDRQPIAANIDLVFLVCGLDGDFNLRRLERYLTLAAESGASPIVVLNKSDLCDDLPARFAETV
QVSGAAPIVTIHTRDEAGIAPLRAWLAPGRTVALLGSSGVGKSSIVNCLAGDARLRTAEVRESDSRGRHTTTHRELIVLP
GSGLLIDTPGMRELQLWAGEDALDQVFDEIAALAAGCRFGDCSHVAEVGCAVQQALAGGTLAPERWHSYLKLRAEVRRHE
SMADPLLAAQQKRKLRNMHQSIKEIYKSRKHRP

Specific function: May play a role in 30S ribosomal subunit biogenesis. Unusual circulary permuted GTPase that catalyzes rapid hydrolysis of GTP with a slow catalytic turnover [H]

COG id: COG1162

COG function: function code R; Predicted GTPases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 engC GTPase domain [H]

Homologues:

Organism=Escherichia coli, GI87082381, Length=279, Percent_Identity=33.6917562724014, Blast_Score=135, Evalue=3e-33,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010914
- InterPro:   IPR012340
- InterPro:   IPR016027
- InterPro:   IPR004881 [H]

Pfam domain/function: PF03193 DUF258 [H]

EC number: NA

Molecular weight: Translated: 38366; Mature: 38366

Theoretical pI: Translated: 8.30; Mature: 8.30

Prosite motif: PS50936 ENGC_GTPASE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.0 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
2.0 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MCLDLLGATPELRAAVPSPRLLARVLLSQRDQYKLLSEAGELDAEPAGVLWHTAPSRADM
CCCCCCCCCCHHHHCCCCHHHHHHHHHHCCHHHHHHHHHCCCCCCCCCEEEECCCCCCCC
PVVGDWVAARVVGPGQAIVEGVLPRRTFFSRRAPGRREDRQPIAANIDLVFLVCGLDGDF
CEECCHHHHEECCCCHHHHHHHCCHHHHHHCCCCCCCCCCCCCCCCCEEEEEEECCCCCC
NLRRLERYLTLAAESGASPIVVLNKSDLCDDLPARFAETVQVSGAAPIVTIHTRDEAGIA
CHHHHHHHHHHHHCCCCCCEEEECCCCCCHHHHHHHHHHHEECCCCCEEEEEECCCCCHH
PLRAWLAPGRTVALLGSSGVGKSSIVNCLAGDARLRTAEVRESDSRGRHTTTHRELIVLP
HHHHHHCCCCEEEEECCCCCCHHHHHHHHCCCCCEEHHHHHCCCCCCCCCCCCCEEEEEC
GSGLLIDTPGMRELQLWAGEDALDQVFDEIAALAAGCRFGDCSHVAEVGCAVQQALAGGT
CCCEEEECCCCCEEEEECCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCC
LAPERWHSYLKLRAEVRRHESMADPLLAAQQKRKLRNMHQSIKEIYKSRKHRP
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure
MCLDLLGATPELRAAVPSPRLLARVLLSQRDQYKLLSEAGELDAEPAGVLWHTAPSRADM
CCCCCCCCCCHHHHCCCCHHHHHHHHHHCCHHHHHHHHHCCCCCCCCCEEEECCCCCCCC
PVVGDWVAARVVGPGQAIVEGVLPRRTFFSRRAPGRREDRQPIAANIDLVFLVCGLDGDF
CEECCHHHHEECCCCHHHHHHHCCHHHHHHCCCCCCCCCCCCCCCCCEEEEEEECCCCCC
NLRRLERYLTLAAESGASPIVVLNKSDLCDDLPARFAETVQVSGAAPIVTIHTRDEAGIA
CHHHHHHHHHHHHCCCCCCEEEECCCCCCHHHHHHHHHHHEECCCCCEEEEEECCCCCHH
PLRAWLAPGRTVALLGSSGVGKSSIVNCLAGDARLRTAEVRESDSRGRHTTTHRELIVLP
HHHHHHCCCCEEEEECCCCCCHHHHHHHHCCCCCEEHHHHHCCCCCCCCCCCCCEEEEEC
GSGLLIDTPGMRELQLWAGEDALDQVFDEIAALAAGCRFGDCSHVAEVGCAVQQALAGGT
CCCEEEECCCCCEEEEECCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCC
LAPERWHSYLKLRAEVRRHESMADPLLAAQQKRKLRNMHQSIKEIYKSRKHRP
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: GTP [C]

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11759840 [H]