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The map label for this gene is 116622365

Identifier: 116622365

GI number: 116622365

Start: 4123823

End: 4125826

Strand: Reverse

Name: 116622365

Synonym: Acid_3259

Alternate gene names: NA

Gene position: 4125826-4123823 (Counterclockwise)

Preceding gene: 116622366

Following gene: 116622364

Centisome position: 41.4

GC content: 64.37

Gene sequence:

>2004_bases
ATGGCCGTACCAGCGCCCGCCAGGCAGTTGCCTGCGAATGCGTATACGCCTCTCCCGCCTGGGACGGCGTACCAACCGGC
GGTGCCGGCGAACGAAAAGATGCCGGAGTTGACGCCGCGCTCGGTTGGGTGGGGCGTCTTTCTCTGCGTGGTGTTCACCA
TCGCTTCCGCCTATTCGGGATTGAAGGTGGGCCAAGTGATGGAGGCGGCGATCCCGATCTCGATTCTGGCGATCGGGCTG
GCGCGGCTCTATCCGCGGCGTTCGACGGTGCTCGAGAACGTGATCATTACCGGCATCGGCGGCTTGGCCGGTTCGGTGGT
GGCGGGCGCCATCTTCACGCTGCCGGCGCTTTACATCCTCAAGCTCGACCCGCACCCGCTGCAGACCATCTTCATCTGCG
TAGCCGGCGGCTGCCTGGGCGTGCTGTTCCTGATTCCGCTGCGCCGATATTTCGTGCGCGATATGCACGCCGTGCTTCCC
TACCCCGAGGCCACCGCGATCACGGAGGTGCTGGTCACCGGTGAAAAGGGCGGCTCGCAGGCCAAGCTCCTCTTGCAGGC
GACGGCGATCTCGGGCCTTTATGATTTCTTCGTCACCGCCTTCCACGTGTGGAAGGAGTATTTGGATTTCCAGTTCGTGC
CGGCGATTCACGGCCTCTACGATAAGGCGAGGATCGCGGTGAGCTTCGACGCGATCGGCTTCATTCTCGGCCTGGGCTAC
GTGATGGGCTTGAGAAGCTCGCTGATTCTCTGCGCGGGCGGCGTGCTCTCCAACCTGGTGCTGGTGCCGTTGGTGTGGAT
GATCGGCAGCCACAACACGACGGCGGTGTATCCGGCCACGATACCGATTGCGCAGATGACGGCGGCGCAGATTTTCCGCG
GGTACGTGCGCTTCATCGGCGTGGGCGCGATCGCGACCGCGGGGATTTTCGGAATCGTGAAATCGCTGCGCATCGTGGTG
GCGTCGTTCGGCGTGGCGCTGCGCGCCTTCCGGGTGGGCGAATCGACCTCGGGCGAGCGCACCGACCGCGACCTGCCGGT
CGTGACGATCCTGATCGGCGTGATCGTGAGCGCCGTGGGGATCGCGATCTTCCTGGCCAACCTTTCGCACCAGCCGCTGA
TCGTCGCGGCAGGCGTGGCGCTGGCCCTGGTCTTCTCCTTCTTCTTCACCTCGGTCGCGGCCAATGCGATCGCGACCACG
GCGCGCAATCCGGTGTCGGGGATGACGATGCTGACCATCATCATCTCTTCCATCGTGCTGTTGAACTTCGGGCTCTCGGG
AACCACCGGAATGTTTTTCGTGATGGCGCTGGCCGGGATGGTCTGCACCGCGCTCTCCGTATCGGGCCAGGCGGTGACGG
ATTTTAAGGCGGGCTACTGGCTGGGTTCGACGCCGGCGGCGCAGCAGAAAGTGAAGTTCCTCGGCGTGATTGCCGCGTCC
GCGGCGGCAGGGCTCACGATCGTGATGCTGGCACAGACGTTTCAATTCGGCGAGGCGGCGGTGGGCGATACCAGGGTGGT
GCTGCCTTCGCCGCAGGCCAGCATCATGAAGGCGCTGGTGGAAGGCTTCATGAGCCATCAGCCGGTCGCATACGTGCTAT
TCGGCGTGGGAGCGGCGATCGCGGTTGCCATGGAGATGCTCGGCGTCCCGGCTTTGATTTTCGCGCTCGGCATGTACCTG
CCGCTCGAATTGAACACACCGGCGCTGGTCGGCGGATTTCTGGCGCACTATCTCGGCAAGCGCGCGGAGCGGGCCGGGGG
TACGCGAGGCAACAGCATTCGGGAGCGCGGCGTGATCATCGCCAGCGGACTGATGGCGGGAGGCGCGCTCGGCGGGGTCT
TCGGTGCGGCGTGCCGGTTGATCCAAGGGTACTCTGAAGATTGGATCCGCACGCCGTTCTACGGCAATGAAGTGATTTCG
CAATCGGTATCCGCGGCGCTGTTCGTGGGGCTCTGCGGGTACCTGTGGTACGGGTCGCTGCGGACCAAAGAGGAGAGGGC
ATGA

Upstream 100 bases:

>100_bases
TTTCTACTTTGCAGGGAATAGGACATTTCTACTTTGCGTTGACAAGCGCTGGAAACTTTGCGGAGTAGAAGGATGAAAGG
TAGTACGATACGGGTTCTCT

Downstream 100 bases:

>100_bases
GCGCGAATTTCGAAGAGGTGACAGGCAACGCGATCCTGGGCATCGACACACTTTGGGGAGGCGATGTAATGTGCGCCTCC
GGCACCGGCCGCTTCATCGC

Product: OPT family oligopeptide transporter

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 667; Mature: 666

Protein sequence:

>667_residues
MAVPAPARQLPANAYTPLPPGTAYQPAVPANEKMPELTPRSVGWGVFLCVVFTIASAYSGLKVGQVMEAAIPISILAIGL
ARLYPRRSTVLENVIITGIGGLAGSVVAGAIFTLPALYILKLDPHPLQTIFICVAGGCLGVLFLIPLRRYFVRDMHAVLP
YPEATAITEVLVTGEKGGSQAKLLLQATAISGLYDFFVTAFHVWKEYLDFQFVPAIHGLYDKARIAVSFDAIGFILGLGY
VMGLRSSLILCAGGVLSNLVLVPLVWMIGSHNTTAVYPATIPIAQMTAAQIFRGYVRFIGVGAIATAGIFGIVKSLRIVV
ASFGVALRAFRVGESTSGERTDRDLPVVTILIGVIVSAVGIAIFLANLSHQPLIVAAGVALALVFSFFFTSVAANAIATT
ARNPVSGMTMLTIIISSIVLLNFGLSGTTGMFFVMALAGMVCTALSVSGQAVTDFKAGYWLGSTPAAQQKVKFLGVIAAS
AAAGLTIVMLAQTFQFGEAAVGDTRVVLPSPQASIMKALVEGFMSHQPVAYVLFGVGAAIAVAMEMLGVPALIFALGMYL
PLELNTPALVGGFLAHYLGKRAERAGGTRGNSIRERGVIIASGLMAGGALGGVFGAACRLIQGYSEDWIRTPFYGNEVIS
QSVSAALFVGLCGYLWYGSLRTKEERA

Sequences:

>Translated_667_residues
MAVPAPARQLPANAYTPLPPGTAYQPAVPANEKMPELTPRSVGWGVFLCVVFTIASAYSGLKVGQVMEAAIPISILAIGL
ARLYPRRSTVLENVIITGIGGLAGSVVAGAIFTLPALYILKLDPHPLQTIFICVAGGCLGVLFLIPLRRYFVRDMHAVLP
YPEATAITEVLVTGEKGGSQAKLLLQATAISGLYDFFVTAFHVWKEYLDFQFVPAIHGLYDKARIAVSFDAIGFILGLGY
VMGLRSSLILCAGGVLSNLVLVPLVWMIGSHNTTAVYPATIPIAQMTAAQIFRGYVRFIGVGAIATAGIFGIVKSLRIVV
ASFGVALRAFRVGESTSGERTDRDLPVVTILIGVIVSAVGIAIFLANLSHQPLIVAAGVALALVFSFFFTSVAANAIATT
ARNPVSGMTMLTIIISSIVLLNFGLSGTTGMFFVMALAGMVCTALSVSGQAVTDFKAGYWLGSTPAAQQKVKFLGVIAAS
AAAGLTIVMLAQTFQFGEAAVGDTRVVLPSPQASIMKALVEGFMSHQPVAYVLFGVGAAIAVAMEMLGVPALIFALGMYL
PLELNTPALVGGFLAHYLGKRAERAGGTRGNSIRERGVIIASGLMAGGALGGVFGAACRLIQGYSEDWIRTPFYGNEVIS
QSVSAALFVGLCGYLWYGSLRTKEERA
>Mature_666_residues
AVPAPARQLPANAYTPLPPGTAYQPAVPANEKMPELTPRSVGWGVFLCVVFTIASAYSGLKVGQVMEAAIPISILAIGLA
RLYPRRSTVLENVIITGIGGLAGSVVAGAIFTLPALYILKLDPHPLQTIFICVAGGCLGVLFLIPLRRYFVRDMHAVLPY
PEATAITEVLVTGEKGGSQAKLLLQATAISGLYDFFVTAFHVWKEYLDFQFVPAIHGLYDKARIAVSFDAIGFILGLGYV
MGLRSSLILCAGGVLSNLVLVPLVWMIGSHNTTAVYPATIPIAQMTAAQIFRGYVRFIGVGAIATAGIFGIVKSLRIVVA
SFGVALRAFRVGESTSGERTDRDLPVVTILIGVIVSAVGIAIFLANLSHQPLIVAAGVALALVFSFFFTSVAANAIATTA
RNPVSGMTMLTIIISSIVLLNFGLSGTTGMFFVMALAGMVCTALSVSGQAVTDFKAGYWLGSTPAAQQKVKFLGVIAASA
AAGLTIVMLAQTFQFGEAAVGDTRVVLPSPQASIMKALVEGFMSHQPVAYVLFGVGAAIAVAMEMLGVPALIFALGMYLP
LELNTPALVGGFLAHYLGKRAERAGGTRGNSIRERGVIIASGLMAGGALGGVFGAACRLIQGYSEDWIRTPFYGNEVISQ
SVSAALFVGLCGYLWYGSLRTKEERA

Specific function: Unknown

COG id: COG1297

COG function: function code S; Predicted membrane protein

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the oligopeptide OPT transporter family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004814
- InterPro:   IPR004813 [H]

Pfam domain/function: PF03169 OPT [H]

EC number: NA

Molecular weight: Translated: 69974; Mature: 69842

Theoretical pI: Translated: 9.39; Mature: 9.39

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAVPAPARQLPANAYTPLPPGTAYQPAVPANEKMPELTPRSVGWGVFLCVVFTIASAYSG
CCCCCCCHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCC
LKVGQVMEAAIPISILAIGLARLYPRRSTVLENVIITGIGGLAGSVVAGAIFTLPALYIL
CHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHEE
KLDPHPLQTIFICVAGGCLGVLFLIPLRRYFVRDMHAVLPYPEATAITEVLVTGEKGGSQ
ECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHEECCCCCCH
AKLLLQATAISGLYDFFVTAFHVWKEYLDFQFVPAIHGLYDKARIAVSFDAIGFILGLGY
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHEEEEEHHHHHHHHHHHH
VMGLRSSLILCAGGVLSNLVLVPLVWMIGSHNTTAVYPATIPIAQMTAAQIFRGYVRFIG
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEECCCCHHHHHHHHHHHHHHHHHH
VGAIATAGIFGIVKSLRIVVASFGVALRAFRVGESTSGERTDRDLPVVTILIGVIVSAVG
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHH
IAIFLANLSHQPLIVAAGVALALVFSFFFTSVAANAIATTARNPVSGMTMLTIIISSIVL
HHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHH
LNFGLSGTTGMFFVMALAGMVCTALSVSGQAVTDFKAGYWLGSTPAAQQKVKFLGVIAAS
HHCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHH
AAAGLTIVMLAQTFQFGEAAVGDTRVVLPSPQASIMKALVEGFMSHQPVAYVLFGVGAAI
HHCCHHHHHHHHHHHCCCCCCCCCEEEECCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHH
AVAMEMLGVPALIFALGMYLPLELNTPALVGGFLAHYLGKRAERAGGTRGNSIRERGVII
HHHHHHHCHHHHHHHHHHCCCEECCCHHHHHHHHHHHHHHHHHHCCCCCCCCHHHCCEEE
ASGLMAGGALGGVFGAACRLIQGYSEDWIRTPFYGNEVISQSVSAALFVGLCGYLWYGSL
EHHHHHCCHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCC
RTKEERA
CCCCCCC
>Mature Secondary Structure 
AVPAPARQLPANAYTPLPPGTAYQPAVPANEKMPELTPRSVGWGVFLCVVFTIASAYSG
CCCCCCHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCC
LKVGQVMEAAIPISILAIGLARLYPRRSTVLENVIITGIGGLAGSVVAGAIFTLPALYIL
CHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHEE
KLDPHPLQTIFICVAGGCLGVLFLIPLRRYFVRDMHAVLPYPEATAITEVLVTGEKGGSQ
ECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHEECCCCCCH
AKLLLQATAISGLYDFFVTAFHVWKEYLDFQFVPAIHGLYDKARIAVSFDAIGFILGLGY
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHEEEEEHHHHHHHHHHHH
VMGLRSSLILCAGGVLSNLVLVPLVWMIGSHNTTAVYPATIPIAQMTAAQIFRGYVRFIG
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEECCCCHHHHHHHHHHHHHHHHHH
VGAIATAGIFGIVKSLRIVVASFGVALRAFRVGESTSGERTDRDLPVVTILIGVIVSAVG
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHH
IAIFLANLSHQPLIVAAGVALALVFSFFFTSVAANAIATTARNPVSGMTMLTIIISSIVL
HHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHH
LNFGLSGTTGMFFVMALAGMVCTALSVSGQAVTDFKAGYWLGSTPAAQQKVKFLGVIAAS
HHCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHH
AAAGLTIVMLAQTFQFGEAAVGDTRVVLPSPQASIMKALVEGFMSHQPVAYVLFGVGAAI
HHCCHHHHHHHHHHHCCCCCCCCCEEEECCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHH
AVAMEMLGVPALIFALGMYLPLELNTPALVGGFLAHYLGKRAERAGGTRGNSIRERGVII
HHHHHHHCHHHHHHHHHHCCCEECCCHHHHHHHHHHHHHHHHHHCCCCCCCCHHHCCEEE
ASGLMAGGALGGVFGAACRLIQGYSEDWIRTPFYGNEVISQSVSAALFVGLCGYLWYGSL
EHHHHHCCHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCC
RTKEERA
CCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]