| Definition | Candidatus Solibacter usitatus Ellin6076 chromosome, complete genome. |
|---|---|
| Accession | NC_008536 |
| Length | 9,965,640 |
Click here to switch to the map view.
The map label for this gene is 116622364
Identifier: 116622364
GI number: 116622364
Start: 4122498
End: 4123826
Strand: Reverse
Name: 116622364
Synonym: Acid_3258
Alternate gene names: NA
Gene position: 4123826-4122498 (Counterclockwise)
Preceding gene: 116622365
Following gene: 116622362
Centisome position: 41.38
GC content: 64.86
Gene sequence:
>1329_bases ATGAGCGCGAATTTCGAAGAGGTGACAGGCAACGCGATCCTGGGCATCGACACACTTTGGGGAGGCGATGTAATGTGCGC CTCCGGCACCGGCCGCTTCATCGCCGATTCATGGTTCAGCGACCGGCCGTTACCGCGCGCGTACACTGTGGCGGAAGCCG CGCGGGTGCGGGAGAGCGGCGGCGTGGGAGCCAAGAGTCCGGACGCCGCGGCGATCGATGCATACCTGGCGCAGGTGGAT ATCCCAGGCGCGATCCGCGGAGTGAAGGACGCGGCATCCTGGTACGGCGGCTTGCGCGGCGAGTATCTGGCTGGGCTGGC TCTGTGCTTCGAAGCCATGTGGGATCTGGCGATGGAAATCCTCGGAAAGGGCGACCCGGTGCCGTACGAGCGCTGCGTGA TCGCGTCTACGGGGCTGCCGCCCGAGCCCTCGGACCCGGTGGCCAAGCGCGAGCGCGTGGCCGAGCTGCTGGGATGCGCG ACCGGCAAGCGGGAGGAGCTGATCGAGGCAGTGGACGCGTGGCGCAAGCAGCATCGCGTGTCGATGGCGTCGATCAAACT GCTGGGCGCGGCGGTGATCGGGTACTTCGACGATTTGACCGCGCGCAACGTCGTGCCGCACCTGCCCAGGGAACTGCACG GAGTGCCCCGCGCAAACATCGAGTTCCTGCCGATTTTGGACGCGTGGTTTTCCGGTTCGATGAACTACCTGGGGCGTGCA CGCAAACCGGGCGGCGAACCGGAGTACGAGGCGACGTACGAGATCAACGCCTCGCTCGATATCTCGCTGCCGGAGTTCAT GCAGCTGGTGAGCCACGAAGTGGTGCCGGGCCACGTGACCACGTTCGCCTATCTGCAGAATTTGTACTGGCGCGACCTGG CCGGATTCGAGGCCAGCGTGCTGACGATGAATACGCGCGCGGCGGCGCTATTCGAAGGGATTGCCAACAACGCGATCCTG ATGGCGTACGGCGTCACCAGGATCGAGGACCTGCCGGACAAGGACCTGCAGACCGGACTGCTGCTGGCGCTGTTGCAAGA TGACGCGAAGAATCAATCGTCTTACCTGACGTGGGGGGAGGGCACGCCGCAGACCGAGGTGGCGCGCACGCTGTGGACCG ACTACCTGGTGTCGCCGGAGCGCGCAGACAAACTCTCGGGCGCGTGGGGACGGCATCCGTTACTGGGGCGCATGTACCTG CCTGCCTATCGCGCCGGCACGCGCAAGGTCGCGGAGTTGCGTAGTAAGTACACGCCGGAAGTATTTTTGCCGGCGCTGTA TGGGGCGAAGGGGCTCGTGGATATCACGACCATCGAGAAGCTACTCTGA
Upstream 100 bases:
>100_bases ACGGCAATGAAGTGATTTCGCAATCGGTATCCGCGGCGCTGTTCGTGGGGCTCTGCGGGTACCTGTGGTACGGGTCGCTG CGGACCAAAGAGGAGAGGGC
Downstream 100 bases:
>100_bases CTCGGGAACGGACCTCGGGATAACTATAGATAACAGTACCTTTGTATCGCCGCCTGTTACCCTCTCATATCCAAAAGGCC TATTAAATAGGCCACTTTGG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 442; Mature: 441
Protein sequence:
>442_residues MSANFEEVTGNAILGIDTLWGGDVMCASGTGRFIADSWFSDRPLPRAYTVAEAARVRESGGVGAKSPDAAAIDAYLAQVD IPGAIRGVKDAASWYGGLRGEYLAGLALCFEAMWDLAMEILGKGDPVPYERCVIASTGLPPEPSDPVAKRERVAELLGCA TGKREELIEAVDAWRKQHRVSMASIKLLGAAVIGYFDDLTARNVVPHLPRELHGVPRANIEFLPILDAWFSGSMNYLGRA RKPGGEPEYEATYEINASLDISLPEFMQLVSHEVVPGHVTTFAYLQNLYWRDLAGFEASVLTMNTRAAALFEGIANNAIL MAYGVTRIEDLPDKDLQTGLLLALLQDDAKNQSSYLTWGEGTPQTEVARTLWTDYLVSPERADKLSGAWGRHPLLGRMYL PAYRAGTRKVAELRSKYTPEVFLPALYGAKGLVDITTIEKLL
Sequences:
>Translated_442_residues MSANFEEVTGNAILGIDTLWGGDVMCASGTGRFIADSWFSDRPLPRAYTVAEAARVRESGGVGAKSPDAAAIDAYLAQVD IPGAIRGVKDAASWYGGLRGEYLAGLALCFEAMWDLAMEILGKGDPVPYERCVIASTGLPPEPSDPVAKRERVAELLGCA TGKREELIEAVDAWRKQHRVSMASIKLLGAAVIGYFDDLTARNVVPHLPRELHGVPRANIEFLPILDAWFSGSMNYLGRA RKPGGEPEYEATYEINASLDISLPEFMQLVSHEVVPGHVTTFAYLQNLYWRDLAGFEASVLTMNTRAAALFEGIANNAIL MAYGVTRIEDLPDKDLQTGLLLALLQDDAKNQSSYLTWGEGTPQTEVARTLWTDYLVSPERADKLSGAWGRHPLLGRMYL PAYRAGTRKVAELRSKYTPEVFLPALYGAKGLVDITTIEKLL >Mature_441_residues SANFEEVTGNAILGIDTLWGGDVMCASGTGRFIADSWFSDRPLPRAYTVAEAARVRESGGVGAKSPDAAAIDAYLAQVDI PGAIRGVKDAASWYGGLRGEYLAGLALCFEAMWDLAMEILGKGDPVPYERCVIASTGLPPEPSDPVAKRERVAELLGCAT GKREELIEAVDAWRKQHRVSMASIKLLGAAVIGYFDDLTARNVVPHLPRELHGVPRANIEFLPILDAWFSGSMNYLGRAR KPGGEPEYEATYEINASLDISLPEFMQLVSHEVVPGHVTTFAYLQNLYWRDLAGFEASVLTMNTRAAALFEGIANNAILM AYGVTRIEDLPDKDLQTGLLLALLQDDAKNQSSYLTWGEGTPQTEVARTLWTDYLVSPERADKLSGAWGRHPLLGRMYLP AYRAGTRKVAELRSKYTPEVFLPALYGAKGLVDITTIEKLL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 48258; Mature: 48126
Theoretical pI: Translated: 4.86; Mature: 4.86
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSANFEEVTGNAILGIDTLWGGDVMCASGTGRFIADSWFSDRPLPRAYTVAEAARVRESG CCCCCHHCCCCEEEEEEECCCCCEEEECCCCCEEECCCCCCCCCCCHHHHHHHHHHHHCC GVGAKSPDAAAIDAYLAQVDIPGAIRGVKDAASWYGGLRGEYLAGLALCFEAMWDLAMEI CCCCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHH LGKGDPVPYERCVIASTGLPPEPSDPVAKRERVAELLGCATGKREELIEAVDAWRKQHRV HCCCCCCCHHHEEEEECCCCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHH SMASIKLLGAAVIGYFDDLTARNVVPHLPRELHGVPRANIEFLPILDAWFSGSMNYLGRA HHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHCCCCCCCEEEEEHHHHHHCCCHHHHHCC RKPGGEPEYEATYEINASLDISLPEFMQLVSHEVVPGHVTTFAYLQNLYWRDLAGFEASV CCCCCCCCCEEEEEECCEEECCHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCCEEE LTMNTRAAALFEGIANNAILMAYGVTRIEDLPDKDLQTGLLLALLQDDAKNQSSYLTWGE EEECHHHHHHHHHHCCCEEEEEECCHHHHCCCCCHHHHHHHHHHHHHCCCCCCCEEEECC GTPQTEVARTLWTDYLVSPERADKLSGAWGRHPLLGRMYLPAYRAGTRKVAELRSKYTPE CCCHHHHHHHHHHHHHCCCHHHHHCCCCCCCCCCCCHHHCCHHHHHHHHHHHHHHHCCCC VFLPALYGAKGLVDITTIEKLL EEHHHHHCCCCCEEHHHHHHHC >Mature Secondary Structure SANFEEVTGNAILGIDTLWGGDVMCASGTGRFIADSWFSDRPLPRAYTVAEAARVRESG CCCCHHCCCCEEEEEEECCCCCEEEECCCCCEEECCCCCCCCCCCHHHHHHHHHHHHCC GVGAKSPDAAAIDAYLAQVDIPGAIRGVKDAASWYGGLRGEYLAGLALCFEAMWDLAMEI CCCCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHH LGKGDPVPYERCVIASTGLPPEPSDPVAKRERVAELLGCATGKREELIEAVDAWRKQHRV HCCCCCCCHHHEEEEECCCCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHH SMASIKLLGAAVIGYFDDLTARNVVPHLPRELHGVPRANIEFLPILDAWFSGSMNYLGRA HHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHCCCCCCCEEEEEHHHHHHCCCHHHHHCC RKPGGEPEYEATYEINASLDISLPEFMQLVSHEVVPGHVTTFAYLQNLYWRDLAGFEASV CCCCCCCCCEEEEEECCEEECCHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCCEEE LTMNTRAAALFEGIANNAILMAYGVTRIEDLPDKDLQTGLLLALLQDDAKNQSSYLTWGE EEECHHHHHHHHHHCCCEEEEEECCHHHHCCCCCHHHHHHHHHHHHHCCCCCCCEEEECC GTPQTEVARTLWTDYLVSPERADKLSGAWGRHPLLGRMYLPAYRAGTRKVAELRSKYTPE CCCHHHHHHHHHHHHHCCCHHHHHCCCCCCCCCCCCHHHCCHHHHHHHHHHHHHHHCCCC VFLPALYGAKGLVDITTIEKLL EEHHHHHCCCCCEEHHHHHHHC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA