| Definition | Candidatus Solibacter usitatus Ellin6076 chromosome, complete genome. |
|---|---|
| Accession | NC_008536 |
| Length | 9,965,640 |
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The map label for this gene is 116622362
Identifier: 116622362
GI number: 116622362
Start: 4120591
End: 4121544
Strand: Reverse
Name: 116622362
Synonym: Acid_3256
Alternate gene names: NA
Gene position: 4121544-4120591 (Counterclockwise)
Preceding gene: 116622364
Following gene: 116622361
Centisome position: 41.36
GC content: 63.1
Gene sequence:
>954_bases ATGGACCGGAGCGGTACAATAAGGTCCATGAACGACAGTATGGCACAGGCAGGCCCGGGGCTGACTGCGCTCGAAGTGCC AGGCTGGAAGAGTGTCCTCAGCTGGGTTTCGGCGATTCTGTTGGGCGGATTGTTTTTGGCCTCGGGACTCTGGAAGATCA CCGACATTCAAGGTACGGCGGTACGGATGGCGCAGGCCAAGGTGCCGGACGCATTGGGACTTCCGGCGGCGCTGTTCTTC GGCATCGCGGAGACCGTGGGGGCGGTAATGATTCTCGTGCCGCGATTGCGGCGCTGGGGGGCGATGCTGCTGGCGGGAAT GCTGCTGGCTTTCCTGGGCTACTTCGCGTTCAACTACACGGCGCTGCGCGGGGCCGATTGCAGTTGCATCCCCTGGCTGA AGCGCGTGGTGGGCCCGGGATTCTTCATAGGCGACGGCGCGATGCTGGCGATGGCGGCCTTCGCGTGGCTGGGCGCGCGC CGCAGCCAGGGCAAGCGAACGGTGGCGCTAATTGCAGGGGCGGTCGCGGTGTTCGCCGCGGTATCCTTCGGTGTCGGCGA GGCCAGGCAGACCGGGACCAAGGCGCCGGAGAGCATCCTGGTGGACGGAAAGACCTATTCATTGCAGCACGGGAAAGTCT TTCTCTATTTCTTCGACCCGCAGTGCATGCACTGCTTTGACGCGGCGAAGAAGATGTCGCAGCTCCACTGGGGCGATACA CGCGTGGTCGGGGTGCCGATCAGCCAGCCGCGTTATGCGCCGCAATTCAAACTGGACACCGGATTTTCGATGATGGCAAT CACCAGCGACCTGGAGAAATTGAAGCAGGTCTTCCCGTACGTGGGAGTTCCGGCCGGAGTGGCGCTGGAGAACGGGCGCG AGAAGGCTGCGCTGACGAAGTTCGACGGCGACGAACCGGCGGCGAGTTTGAAGCAATTCGGGCTGGTGGAGTGA
Upstream 100 bases:
>100_bases CCTCGTCCACCAGTTCCACGCTGGTTGATGGGCTGGTCGGTGAGCTGCTGGACGCAGCCATGAAGAGAAACCAAGCAAGC GCGATCATACGGCGGGGCGC
Downstream 100 bases:
>100_bases TGCCTGCCCTGCGAGAACCATGAACCTACTTATACCGAACCTGGGATCGACTTCCCTCAAGTATCAGATTCTGGAGATGC CGTCGGAAACGGCGATTGCC
Product: DoxX family protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 317; Mature: 317
Protein sequence:
>317_residues MDRSGTIRSMNDSMAQAGPGLTALEVPGWKSVLSWVSAILLGGLFLASGLWKITDIQGTAVRMAQAKVPDALGLPAALFF GIAETVGAVMILVPRLRRWGAMLLAGMLLAFLGYFAFNYTALRGADCSCIPWLKRVVGPGFFIGDGAMLAMAAFAWLGAR RSQGKRTVALIAGAVAVFAAVSFGVGEARQTGTKAPESILVDGKTYSLQHGKVFLYFFDPQCMHCFDAAKKMSQLHWGDT RVVGVPISQPRYAPQFKLDTGFSMMAITSDLEKLKQVFPYVGVPAGVALENGREKAALTKFDGDEPAASLKQFGLVE
Sequences:
>Translated_317_residues MDRSGTIRSMNDSMAQAGPGLTALEVPGWKSVLSWVSAILLGGLFLASGLWKITDIQGTAVRMAQAKVPDALGLPAALFF GIAETVGAVMILVPRLRRWGAMLLAGMLLAFLGYFAFNYTALRGADCSCIPWLKRVVGPGFFIGDGAMLAMAAFAWLGAR RSQGKRTVALIAGAVAVFAAVSFGVGEARQTGTKAPESILVDGKTYSLQHGKVFLYFFDPQCMHCFDAAKKMSQLHWGDT RVVGVPISQPRYAPQFKLDTGFSMMAITSDLEKLKQVFPYVGVPAGVALENGREKAALTKFDGDEPAASLKQFGLVE >Mature_317_residues MDRSGTIRSMNDSMAQAGPGLTALEVPGWKSVLSWVSAILLGGLFLASGLWKITDIQGTAVRMAQAKVPDALGLPAALFF GIAETVGAVMILVPRLRRWGAMLLAGMLLAFLGYFAFNYTALRGADCSCIPWLKRVVGPGFFIGDGAMLAMAAFAWLGAR RSQGKRTVALIAGAVAVFAAVSFGVGEARQTGTKAPESILVDGKTYSLQHGKVFLYFFDPQCMHCFDAAKKMSQLHWGDT RVVGVPISQPRYAPQFKLDTGFSMMAITSDLEKLKQVFPYVGVPAGVALENGREKAALTKFDGDEPAASLKQFGLVE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 33910; Mature: 33910
Theoretical pI: Translated: 9.76; Mature: 9.76
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 4.1 %Met (Translated Protein) 5.4 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 4.1 %Met (Mature Protein) 5.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDRSGTIRSMNDSMAQAGPGLTALEVPGWKSVLSWVSAILLGGLFLASGLWKITDIQGTA CCCCCCCCCCCHHHHHCCCCCEEEECCCHHHHHHHHHHHHHHHHHHHCCCEEEEECCCHH VRMAQAKVPDALGLPAALFFGIAETVGAVMILVPRLRRWGAMLLAGMLLAFLGYFAFNYT HHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH ALRGADCSCIPWLKRVVGPGFFIGDGAMLAMAAFAWLGARRSQGKRTVALIAGAVAVFAA HCCCCCCHHHHHHHHHHCCCEEECCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHH VSFGVGEARQTGTKAPESILVDGKTYSLQHGKVFLYFFDPQCMHCFDAAKKMSQLHWGDT HHHCCCHHHHCCCCCCCCEEECCCEEEEECCEEEEEEECCHHHHHHHHHHHHHHHCCCCC RVVGVPISQPRYAPQFKLDTGFSMMAITSDLEKLKQVFPYVGVPAGVALENGREKAALTK EEEEECCCCCCCCCCEEECCCCCHHHHHHHHHHHHHHCCCCCCCCCCEECCCCCHHHEEC FDGDEPAASLKQFGLVE CCCCCHHHHHHHCCCCC >Mature Secondary Structure MDRSGTIRSMNDSMAQAGPGLTALEVPGWKSVLSWVSAILLGGLFLASGLWKITDIQGTA CCCCCCCCCCCHHHHHCCCCCEEEECCCHHHHHHHHHHHHHHHHHHHCCCEEEEECCCHH VRMAQAKVPDALGLPAALFFGIAETVGAVMILVPRLRRWGAMLLAGMLLAFLGYFAFNYT HHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH ALRGADCSCIPWLKRVVGPGFFIGDGAMLAMAAFAWLGARRSQGKRTVALIAGAVAVFAA HCCCCCCHHHHHHHHHHCCCEEECCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHH VSFGVGEARQTGTKAPESILVDGKTYSLQHGKVFLYFFDPQCMHCFDAAKKMSQLHWGDT HHHCCCHHHHCCCCCCCCEEECCCEEEEECCEEEEEEECCHHHHHHHHHHHHHHHCCCCC RVVGVPISQPRYAPQFKLDTGFSMMAITSDLEKLKQVFPYVGVPAGVALENGREKAALTK EEEEECCCCCCCCCCEEECCCCCHHHHHHHHHHHHHHCCCCCCCCCCEECCCCCHHHEEC FDGDEPAASLKQFGLVE CCCCCHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA