| Definition | Candidatus Solibacter usitatus Ellin6076 chromosome, complete genome. |
|---|---|
| Accession | NC_008536 |
| Length | 9,965,640 |
Click here to switch to the map view.
The map label for this gene is 116621848
Identifier: 116621848
GI number: 116621848
Start: 3462295
End: 3463317
Strand: Direct
Name: 116621848
Synonym: Acid_2730
Alternate gene names: NA
Gene position: 3462295-3463317 (Clockwise)
Preceding gene: 116621847
Following gene: 116621854
Centisome position: 34.74
GC content: 65.4
Gene sequence:
>1023_bases GTGTTCGCACTCCTCTTTTGGGCCGCGATTCAATTCCAAGGGGGCGTCTTCCGCGTGAGCGGTTGGGATGCCCCCGCGGA AGCTCCGGCGGCGGGTTGGCAGAGCGTCCTCTCGGTTTACGCAGGAGCCTCCGGCGTCCCTCCACTGCTCGGCCAGTATA GTGTCGAAGCCGGCGAACTGGTTTTCCGCCCCCGTTTTCCGCTCTCCCCCGGCATGCACGTTCGCGCTGTCTTTCAAGCT CCCGGAGCCGCGGAGATCGAAGAGTCCTTCGATGTCCCGGCCGGTCCGGCGGTCCAGGCGACCACGCGGGTGGCGCAGGT CTATCCGTCGGCCAGCGTTCTTCCCGCCAACACGCTCAAGTTCTACATCTATTTTTCCGCCCCCATGCAGCGCGGCGATT CCTGGACACATCTCCGCCTGCTCCGCGAAGACGGCACGCGCGTCGAGTATCCCTTCCTCGAACTCGACCAGGAGCTTTGG GATCGCGACAACCGCCGCTTCACGGTGCTGTTCGATCCCGGCCGCATCAAGCGCGGACTGGCCTCGCGCGAAGAAGCGGG GCCGGCGCTCGAACCGGGGCACACGTACACGTTCGTTGTGGACCGCGCCTGGCGGGACGGACGCGGCGCGCCACTGGCTC AGGAATACCGCAAGACGTTCCGCGTCGCGGCGGACGATCGCACGCCGCCCGACCCCAGGAGGTGGCGCATCACTCCGCCG CGCGCCGGCACACGCGATCCGCTGGTTCTGACGTTTCCCAAGCCGCTTGACTACGCGCTGCTGCAGCATGAGATCGAGAT CGGGGGAATGCGCGGCGAAGTCTCGGTTGCCCGGGAAGAGAAGGAGTGGCGCTTCATTCCGGACACGCCATGGTCGTCGC ACGAGTACCGCATCGCCGTTCGCACGACGCTGGAAGATATCGCAGGGAATCACGTCAATCGACCGTTTGATGTGGACACG TTCGACCCGATTACCACGTCGGTCGCGAGCGAAGTGATGACGCTGAAGATGCGCCCGCGTTGA
Upstream 100 bases:
>100_bases TGAAAGGCGTCCAGCACCTGGACAAGTATGACGACGCTAGCGCCCTGGTGCTGATGGGCGAAGGCGGGTCGCTCGATCTG CGCACGGTGCCGCTGCCGTA
Downstream 100 bases:
>100_bases GAACAACCGAGTAGTTGGTTTTCTTAGCGTTACTTTGCGGCTTTGCGGCTTTGCGAGAAATGACGCGACCGTTCCGTTGA CGACTCTGCCGTTTCCCGTC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 340; Mature: 340
Protein sequence:
>340_residues MFALLFWAAIQFQGGVFRVSGWDAPAEAPAAGWQSVLSVYAGASGVPPLLGQYSVEAGELVFRPRFPLSPGMHVRAVFQA PGAAEIEESFDVPAGPAVQATTRVAQVYPSASVLPANTLKFYIYFSAPMQRGDSWTHLRLLREDGTRVEYPFLELDQELW DRDNRRFTVLFDPGRIKRGLASREEAGPALEPGHTYTFVVDRAWRDGRGAPLAQEYRKTFRVAADDRTPPDPRRWRITPP RAGTRDPLVLTFPKPLDYALLQHEIEIGGMRGEVSVAREEKEWRFIPDTPWSSHEYRIAVRTTLEDIAGNHVNRPFDVDT FDPITTSVASEVMTLKMRPR
Sequences:
>Translated_340_residues MFALLFWAAIQFQGGVFRVSGWDAPAEAPAAGWQSVLSVYAGASGVPPLLGQYSVEAGELVFRPRFPLSPGMHVRAVFQA PGAAEIEESFDVPAGPAVQATTRVAQVYPSASVLPANTLKFYIYFSAPMQRGDSWTHLRLLREDGTRVEYPFLELDQELW DRDNRRFTVLFDPGRIKRGLASREEAGPALEPGHTYTFVVDRAWRDGRGAPLAQEYRKTFRVAADDRTPPDPRRWRITPP RAGTRDPLVLTFPKPLDYALLQHEIEIGGMRGEVSVAREEKEWRFIPDTPWSSHEYRIAVRTTLEDIAGNHVNRPFDVDT FDPITTSVASEVMTLKMRPR >Mature_340_residues MFALLFWAAIQFQGGVFRVSGWDAPAEAPAAGWQSVLSVYAGASGVPPLLGQYSVEAGELVFRPRFPLSPGMHVRAVFQA PGAAEIEESFDVPAGPAVQATTRVAQVYPSASVLPANTLKFYIYFSAPMQRGDSWTHLRLLREDGTRVEYPFLELDQELW DRDNRRFTVLFDPGRIKRGLASREEAGPALEPGHTYTFVVDRAWRDGRGAPLAQEYRKTFRVAADDRTPPDPRRWRITPP RAGTRDPLVLTFPKPLDYALLQHEIEIGGMRGEVSVAREEKEWRFIPDTPWSSHEYRIAVRTTLEDIAGNHVNRPFDVDT FDPITTSVASEVMTLKMRPR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 38254; Mature: 38254
Theoretical pI: Translated: 6.53; Mature: 6.53
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 1.8 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 1.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MFALLFWAAIQFQGGVFRVSGWDAPAEAPAAGWQSVLSVYAGASGVPPLLGQYSVEAGEL CHHEEEEEHHHCCCCEEEEECCCCCCCCCHHHHHHHHHHHCCCCCCCHHHCCCCCCCCCE VFRPRFPLSPGMHVRAVFQAPGAAEIEESFDVPAGPAVQATTRVAQVYPSASVLPANTLK EEECCCCCCCCCEEEEEECCCCCCHHHHHCCCCCCCCHHHHHHHHHHCCCCCCCCCCCEE FYIYFSAPMQRGDSWTHLRLLREDGTRVEYPFLELDQELWDRDNRRFTVLFDPGRIKRGL EEEEEECCCCCCCCCEEEEEEECCCCEEECCHHHHHHHHHCCCCCEEEEEECCCHHHHHH ASREEAGPALEPGHTYTFVVDRAWRDGRGAPLAQEYRKTFRVAADDRTPPDPRRWRITPP CCHHHCCCCCCCCCEEEEEEECCCCCCCCCCHHHHHHHHHEEEECCCCCCCCCEEEECCC RAGTRDPLVLTFPKPLDYALLQHEIEIGGMRGEVSVAREEKEWRFIPDTPWSSHEYRIAV CCCCCCCEEEECCCCCCHHHHHHHHEECCCCCEEEEEECCCCEEECCCCCCCCCEEEEEE RTTLEDIAGNHVNRPFDVDTFDPITTSVASEVMTLKMRPR EEEHHHHCCCCCCCCCCCCCCCHHHHHHHHHEEEEEECCC >Mature Secondary Structure MFALLFWAAIQFQGGVFRVSGWDAPAEAPAAGWQSVLSVYAGASGVPPLLGQYSVEAGEL CHHEEEEEHHHCCCCEEEEECCCCCCCCCHHHHHHHHHHHCCCCCCCHHHCCCCCCCCCE VFRPRFPLSPGMHVRAVFQAPGAAEIEESFDVPAGPAVQATTRVAQVYPSASVLPANTLK EEECCCCCCCCCEEEEEECCCCCCHHHHHCCCCCCCCHHHHHHHHHHCCCCCCCCCCCEE FYIYFSAPMQRGDSWTHLRLLREDGTRVEYPFLELDQELWDRDNRRFTVLFDPGRIKRGL EEEEEECCCCCCCCCEEEEEEECCCCEEECCHHHHHHHHHCCCCCEEEEEECCCHHHHHH ASREEAGPALEPGHTYTFVVDRAWRDGRGAPLAQEYRKTFRVAADDRTPPDPRRWRITPP CCHHHCCCCCCCCCEEEEEEECCCCCCCCCCHHHHHHHHHEEEECCCCCCCCCEEEECCC RAGTRDPLVLTFPKPLDYALLQHEIEIGGMRGEVSVAREEKEWRFIPDTPWSSHEYRIAV CCCCCCCEEEECCCCCCHHHHHHHHEECCCCCEEEEEECCCCEEECCCCCCCCCEEEEEE RTTLEDIAGNHVNRPFDVDTFDPITTSVASEVMTLKMRPR EEEHHHHCCCCCCCCCCCCCCCHHHHHHHHHEEEEEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA