| Definition | Candidatus Solibacter usitatus Ellin6076 chromosome, complete genome. |
|---|---|
| Accession | NC_008536 |
| Length | 9,965,640 |
Click here to switch to the map view.
The map label for this gene is 116621847
Identifier: 116621847
GI number: 116621847
Start: 3461225
End: 3462295
Strand: Direct
Name: 116621847
Synonym: Acid_2729
Alternate gene names: NA
Gene position: 3461225-3462295 (Clockwise)
Preceding gene: 116621846
Following gene: 116621848
Centisome position: 34.73
GC content: 62.37
Gene sequence:
>1071_bases GTGAACTTCACCCGATGTTACAGGCTCGCCGCGGCCGCTTCGTGCGCGGCGGCTCTCACCTTCGCCGCCGCCGTGAATAT GCCGGCCGGCAAAGTAGACCTCAAATCCGCCGGCGCGCTGGCCATGGGTCCAGACGGCATTCTCTTCGTAGGCGATTCGA TTGGCGCGTCGATTGTGGCGCTCGACACGGAAGACCGCACTCCCTCGAAATCCGGCGCCGCGCTCGAGATTAAGGGAGTC AACGAAAAGATCGCCGCGATGCTCGGTACCGCGCCCGACCAGATTCTGATTCAGGACGTGGTAGTCAACCCGATTTCGAA GAATGTTTATATCGCCGTGTCGCGCGGCCGCGGCGCCGACGCCGTCCCGGTGATTCTGCGCGCCGCACCCGGCGGGAAAC TCACCGAAGTGGCGCTGGCCAACATCAAGCATCAATCGGTCAGCCTTACCGACCAGCCGCAGCAGGATCGCGCGCGCATG GAGACCATCACCCAATTGAAGTACGTGGATGGCGAGGTGCTGATCGCGGGTCTTTCGAACGAGGAGTTCTCTTCCAGTCT GCGCTCCATTCCGTTCCCCTTCCAGGCGGCGTCCAAGGGCGCCGGCATCGAGATCTGGCATGGATCGCATGGCCGCTTCG AGACCCAGGCTCCGGTTCGGACCTTCGTGCCCTATGAGATCAACGGCGAAAAATCGATTCTGGCCGCCTACACCTGCACC CCGCTGGTGCGAATTCCGGTCTCGGAATTGAAGGCCGGCGCGAAGGTGAAGGGCACCACCATCGCCGAGCTCGGCAACCG CAATAAGCCGCTCGATATGATCGTTTACTCCAAGGGCGGCAAGCACTACATCCTGATGGCGAATTCCAGCCGCGGCGTCA TGAAGCTCACGGCGGACAACCTGGAATCCTACCAGCCCATCACCAAGCAGACCGAGGTCACCGGCGTTCCCTACGAAACC ATCGCGACGCTGAAAGGCGTCCAGCACCTGGACAAGTATGACGACGCTAGCGCCCTGGTGCTGATGGGCGAAGGCGGGTC GCTCGATCTGCGCACGGTGCCGCTGCCGTAG
Upstream 100 bases:
>100_bases GTGCCCCGGCGTTTCCTCGCGCCGGGGCTTCCCTTGTTTACACCGGCGCTTTGCGCGGCTGTGATAGCATAATCGCAATC TCACTCTCTGGAGGGTTTTT
Downstream 100 bases:
>100_bases TGTTCGCACTCCTCTTTTGGGCCGCGATTCAATTCCAAGGGGGCGTCTTCCGCGTGAGCGGTTGGGATGCCCCCGCGGAA GCTCCGGCGGCGGGTTGGCA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 356; Mature: 356
Protein sequence:
>356_residues MNFTRCYRLAAAASCAAALTFAAAVNMPAGKVDLKSAGALAMGPDGILFVGDSIGASIVALDTEDRTPSKSGAALEIKGV NEKIAAMLGTAPDQILIQDVVVNPISKNVYIAVSRGRGADAVPVILRAAPGGKLTEVALANIKHQSVSLTDQPQQDRARM ETITQLKYVDGEVLIAGLSNEEFSSSLRSIPFPFQAASKGAGIEIWHGSHGRFETQAPVRTFVPYEINGEKSILAAYTCT PLVRIPVSELKAGAKVKGTTIAELGNRNKPLDMIVYSKGGKHYILMANSSRGVMKLTADNLESYQPITKQTEVTGVPYET IATLKGVQHLDKYDDASALVLMGEGGSLDLRTVPLP
Sequences:
>Translated_356_residues MNFTRCYRLAAAASCAAALTFAAAVNMPAGKVDLKSAGALAMGPDGILFVGDSIGASIVALDTEDRTPSKSGAALEIKGV NEKIAAMLGTAPDQILIQDVVVNPISKNVYIAVSRGRGADAVPVILRAAPGGKLTEVALANIKHQSVSLTDQPQQDRARM ETITQLKYVDGEVLIAGLSNEEFSSSLRSIPFPFQAASKGAGIEIWHGSHGRFETQAPVRTFVPYEINGEKSILAAYTCT PLVRIPVSELKAGAKVKGTTIAELGNRNKPLDMIVYSKGGKHYILMANSSRGVMKLTADNLESYQPITKQTEVTGVPYET IATLKGVQHLDKYDDASALVLMGEGGSLDLRTVPLP >Mature_356_residues MNFTRCYRLAAAASCAAALTFAAAVNMPAGKVDLKSAGALAMGPDGILFVGDSIGASIVALDTEDRTPSKSGAALEIKGV NEKIAAMLGTAPDQILIQDVVVNPISKNVYIAVSRGRGADAVPVILRAAPGGKLTEVALANIKHQSVSLTDQPQQDRARM ETITQLKYVDGEVLIAGLSNEEFSSSLRSIPFPFQAASKGAGIEIWHGSHGRFETQAPVRTFVPYEINGEKSILAAYTCT PLVRIPVSELKAGAKVKGTTIAELGNRNKPLDMIVYSKGGKHYILMANSSRGVMKLTADNLESYQPITKQTEVTGVPYET IATLKGVQHLDKYDDASALVLMGEGGSLDLRTVPLP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 37667; Mature: 37667
Theoretical pI: Translated: 8.06; Mature: 8.06
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNFTRCYRLAAAASCAAALTFAAAVNMPAGKVDLKSAGALAMGPDGILFVGDSIGASIVA CCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEECCCCCEEEECCCCEEEEECCCCCEEEE LDTEDRTPSKSGAALEIKGVNEKIAAMLGTAPDQILIQDVVVNPISKNVYIAVSRGRGAD EECCCCCCCCCCCEEEEECCCHHHHHHHCCCCCCEEEEHHHCCCCCCCEEEEEECCCCCC AVPVILRAAPGGKLTEVALANIKHQSVSLTDQPQQDRARMETITQLKYVDGEVLIAGLSN CEEEEEEECCCCCCHHHHHHHCCCCEEECCCCCHHHHHHHHHHHHHEEECCEEEEEECCC EEFSSSLRSIPFPFQAASKGAGIEIWHGSHGRFETQAPVRTFVPYEINGEKSILAAYTCT HHHHHHHHCCCCCHHHCCCCCCEEEEECCCCCEECCCCCEEECCEEECCCCEEEEEEECC PLVRIPVSELKAGAKVKGTTIAELGNRNKPLDMIVYSKGGKHYILMANSSRGVMKLTADN CEEECCHHHHCCCCEECCCCHHHHCCCCCCEEEEEECCCCCEEEEEECCCCCEEEEECCC LESYQPITKQTEVTGVPYETIATLKGVQHLDKYDDASALVLMGEGGSLDLRTVPLP CCCCCCCCCCCEECCCCHHHHHHHHHHHHHHCCCCCCEEEEEECCCCEEEEEECCC >Mature Secondary Structure MNFTRCYRLAAAASCAAALTFAAAVNMPAGKVDLKSAGALAMGPDGILFVGDSIGASIVA CCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEECCCCCEEEECCCCEEEEECCCCCEEEE LDTEDRTPSKSGAALEIKGVNEKIAAMLGTAPDQILIQDVVVNPISKNVYIAVSRGRGAD EECCCCCCCCCCCEEEEECCCHHHHHHHCCCCCCEEEEHHHCCCCCCCEEEEEECCCCCC AVPVILRAAPGGKLTEVALANIKHQSVSLTDQPQQDRARMETITQLKYVDGEVLIAGLSN CEEEEEEECCCCCCHHHHHHHCCCCEEECCCCCHHHHHHHHHHHHHEEECCEEEEEECCC EEFSSSLRSIPFPFQAASKGAGIEIWHGSHGRFETQAPVRTFVPYEINGEKSILAAYTCT HHHHHHHHCCCCCHHHCCCCCCEEEEECCCCCEECCCCCEEECCEEECCCCEEEEEEECC PLVRIPVSELKAGAKVKGTTIAELGNRNKPLDMIVYSKGGKHYILMANSSRGVMKLTADN CEEECCHHHHCCCCEECCCCHHHHCCCCCCEEEEEECCCCCEEEEEECCCCCEEEEECCC LESYQPITKQTEVTGVPYETIATLKGVQHLDKYDDASALVLMGEGGSLDLRTVPLP CCCCCCCCCCCEECCCCHHHHHHHHHHHHHHCCCCCCEEEEEECCCCEEEEEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA