| Definition | Candidatus Solibacter usitatus Ellin6076 chromosome, complete genome. |
|---|---|
| Accession | NC_008536 |
| Length | 9,965,640 |
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The map label for this gene is 116621722
Identifier: 116621722
GI number: 116621722
Start: 3286012
End: 3286845
Strand: Reverse
Name: 116621722
Synonym: Acid_2604
Alternate gene names: NA
Gene position: 3286845-3286012 (Counterclockwise)
Preceding gene: 116621732
Following gene: 116621719
Centisome position: 32.98
GC content: 60.55
Gene sequence:
>834_bases ATGTCCCGATTCCTGATTGCAGTCGCCGCGGCGGCGCTGTTGAGCCCGCTGGCATCGCAAACTCCGCAGCGTCCCAGGCC GAAGCGCGTGCTGGCGTGGGGCGACACGCTGACGGCGTTCCAGCACGATTCGATATCGCACGCGCTGGCGACGATGGAGC GGCTGGGTCACGATTCGGGCGCGTACGAGATGTACATCCGCACGGATTCGCAATTGATTACAAAGCAGGCGATTCCCGCG CCGGCGCGGAATACGCGGAACCTGGATTACTTCGACGCGATTTTCTATTTCGGCACCGGGGACAATTTGACTGCGGCGCA GAAGAAGGACCTGATCACGTTCGTGAAGGACGAGGGCAAGGGCTTCGTGGGTGCGCACACGGGCGACGATGCGTTCTTCG AATGGCCGGAGTTCGGCGAAATGATCGGAGGGTACTTCGATAATCATCCGTGGGGGCAGTTCGACGCTCCGGTGATTGTG GAAGATCCGGGGTTTCCGGCGATGAAGCATTTTCCGGCGAGGTTCACGATTCACGACGAGATTTACCAGCACAAGGATTT CGACCGGACGAAGGTGCGGGTGCTGGCGAGCCTGGATGCCTCGAAGCTGGATTACACGAAGCCTAACATTCACCGGACGG ACCGGGATTTCGCTGTGGCATGGGCGAAGATGTACGGAAAGGGACGGGTCTTCTATAGCTCGTTCGGGCATGCACCGGAG ACGTGGGACGATCCGCAGGTGCAGAAAATGTATTTCGAGGCCACCCGGTGGGTGCTGCGTCTGGTTGGTGACGATGTGAC GCCGGGGCCGGCGAAGGCGCCCGGTTCGAAGTAG
Upstream 100 bases:
>100_bases CAGTAAGGGTCAGGCGAGATGCGGTATTCAGTTTCATGGCTAGGCGGCTACCAGCATAATGGGACGCGCTTCTCCCCGCA ACGGCGGTATCGTAGGATTT
Downstream 100 bases:
>100_bases TCTAAGATACAGCGCGAGGGGCGCTTGGATGATGTACTGAAGGCCAGGAGGGCTTATGGCCACGCAGAAGACCTGCAAAC ATCCAGCATGCAACTGTCCG
Product: hypothetical protein
Products: NA
Alternate protein names: Secreted Glycosyl Hydrolase; PKD Domain Containing Protein; Crp/FNR Family Transcriptional Regulator; Sigma-70 Factor; Membrane-Bound Dehydrogenase Domain Protein; Cytochrome C Class I; LOW QUALITY PROTEIN Sigma-70 Factor; LPXTG-Motif Cell Wall Anchor Domain Protein; Crp/Fnr Family Transcriptional Regulator; Pkd Domain Containing Protein; Glucose/Sorbosone Dehydrogenase; Class I Glutamine Amidotransferase-Like Protein
Number of amino acids: Translated: 277; Mature: 276
Protein sequence:
>277_residues MSRFLIAVAAAALLSPLASQTPQRPRPKRVLAWGDTLTAFQHDSISHALATMERLGHDSGAYEMYIRTDSQLITKQAIPA PARNTRNLDYFDAIFYFGTGDNLTAAQKKDLITFVKDEGKGFVGAHTGDDAFFEWPEFGEMIGGYFDNHPWGQFDAPVIV EDPGFPAMKHFPARFTIHDEIYQHKDFDRTKVRVLASLDASKLDYTKPNIHRTDRDFAVAWAKMYGKGRVFYSSFGHAPE TWDDPQVQKMYFEATRWVLRLVGDDVTPGPAKAPGSK
Sequences:
>Translated_277_residues MSRFLIAVAAAALLSPLASQTPQRPRPKRVLAWGDTLTAFQHDSISHALATMERLGHDSGAYEMYIRTDSQLITKQAIPA PARNTRNLDYFDAIFYFGTGDNLTAAQKKDLITFVKDEGKGFVGAHTGDDAFFEWPEFGEMIGGYFDNHPWGQFDAPVIV EDPGFPAMKHFPARFTIHDEIYQHKDFDRTKVRVLASLDASKLDYTKPNIHRTDRDFAVAWAKMYGKGRVFYSSFGHAPE TWDDPQVQKMYFEATRWVLRLVGDDVTPGPAKAPGSK >Mature_276_residues SRFLIAVAAAALLSPLASQTPQRPRPKRVLAWGDTLTAFQHDSISHALATMERLGHDSGAYEMYIRTDSQLITKQAIPAP ARNTRNLDYFDAIFYFGTGDNLTAAQKKDLITFVKDEGKGFVGAHTGDDAFFEWPEFGEMIGGYFDNHPWGQFDAPVIVE DPGFPAMKHFPARFTIHDEIYQHKDFDRTKVRVLASLDASKLDYTKPNIHRTDRDFAVAWAKMYGKGRVFYSSFGHAPET WDDPQVQKMYFEATRWVLRLVGDDVTPGPAKAPGSK
Specific function: Unknown
COG id: COG3828
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 31197; Mature: 31066
Theoretical pI: Translated: 6.87; Mature: 6.87
Prosite motif: PS01159 WW_DOMAIN_1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSRFLIAVAAAALLSPLASQTPQRPRPKRVLAWGDTLTAFQHDSISHALATMERLGHDSG CCHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEECCCHHHHCCCHHHHHHHHHHHHCCCCC AYEMYIRTDSQLITKQAIPAPARNTRNLDYFDAIFYFGTGDNLTAAQKKDLITFVKDEGK CEEEEEECCHHHHHHHCCCCCCCCCCCCCCEEEEEEEECCCCCCHHHHHHHEEEEECCCC GFVGAHTGDDAFFEWPEFGEMIGGYFDNHPWGQFDAPVIVEDPGFPAMKHFPARFTIHDE EEEEECCCCCCCCCCCHHHHHHCCCCCCCCCCCCCCCEEEECCCCCHHHHCCCEEEEHHH IYQHKDFDRTKVRVLASLDASKLDYTKPNIHRTDRDFAVAWAKMYGKGRVFYSSFGHAPE HHHCCCCCHHHHHHEECCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCEEEEECCCCCCC TWDDPQVQKMYFEATRWVLRLVGDDVTPGPAKAPGSK CCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCC >Mature Secondary Structure SRFLIAVAAAALLSPLASQTPQRPRPKRVLAWGDTLTAFQHDSISHALATMERLGHDSG CHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEECCCHHHHCCCHHHHHHHHHHHHCCCCC AYEMYIRTDSQLITKQAIPAPARNTRNLDYFDAIFYFGTGDNLTAAQKKDLITFVKDEGK CEEEEEECCHHHHHHHCCCCCCCCCCCCCCEEEEEEEECCCCCCHHHHHHHEEEEECCCC GFVGAHTGDDAFFEWPEFGEMIGGYFDNHPWGQFDAPVIVEDPGFPAMKHFPARFTIHDE EEEEECCCCCCCCCCCHHHHHHCCCCCCCCCCCCCCCEEEECCCCCHHHHCCCEEEEHHH IYQHKDFDRTKVRVLASLDASKLDYTKPNIHRTDRDFAVAWAKMYGKGRVFYSSFGHAPE HHHCCCCCHHHHHHEECCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCEEEEECCCCCCC TWDDPQVQKMYFEATRWVLRLVGDDVTPGPAKAPGSK CCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA