| Definition | Candidatus Solibacter usitatus Ellin6076 chromosome, complete genome. |
|---|---|
| Accession | NC_008536 |
| Length | 9,965,640 |
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The map label for this gene is 116621732
Identifier: 116621732
GI number: 116621732
Start: 3298879
End: 3300810
Strand: Reverse
Name: 116621732
Synonym: Acid_2614
Alternate gene names: NA
Gene position: 3300810-3298879 (Counterclockwise)
Preceding gene: 116621734
Following gene: 116621722
Centisome position: 33.12
GC content: 63.51
Gene sequence:
>1932_bases ATGGAGTTCGCCATGTGGAAAGTGTGGTTATCGGGTCTGGTTCTCGGCTGTCTGGCGGGGAACGGCGCCGTGCGGGTGGC GCGGGACGGGGAGCGGTGGACGCTCGAGAACGCGGAACTGCGGGTGACGGTGGACGCGGCGGCCGCATCAGTTACGGTGG CGGAGAAGGGCAGCCGGTTTGTGTGGACGCAGATGGAGGCGAAGAGCGCGGCATTTCGCGGCGTGAAGCAGATCGCCGGC GGCATCGGGTTCGAGGTTGGCACGATGACCTTGAAGGTCAGTCTGCCGGACCACTGGGCGGACCTGCGCGTAGAGGCCGA CGTGGCCGATCGCACGGCGCCCGTCGACAGTGCAGGATTCCTGAGCCCGTTCCTGCTGGACTCGGAGAACGGCGCGATCG TGGTTGCGGATTATTCGAACGGGCACGCCTACCCGGTGCGGATGAAGCCGTTCCCGAGAAGGCGGTTCGACCTGGGCAAC ATCGACATGCCGTGGATCGGGGTCTGCGACCTGACGGAAGGGCAAGGGTACGCGTTGATCGCGGAGACGCCGGACGACGC GGCATTCGATGTGGTGAGTGTGGAGCGCGAGGGTCACACGGTATCGGCGCCGCGGCTGATGTGGAACGCAAGCATGCGCA CGTTCCGATACCCGCGGCGCGTTGTCTATCGCTTCTCGGCGAGCGGCGGGTATGTGGCGCTGGCCAAGGGCTACCGGGCT TATGCGAAGGAGCACGGGCTGATCGTGCCGTTCACGGAGAAGCTCAAGAAGAATCCGAATATCGCGCGGGCGTTCGGGGC GCCGGACGTGTGGGGCAACGGGTCGCTGCGCTTCGCGCGCGAGGCGAAGGCGGCGGGCGTGGAGAAGATGCTGATCCATG GCACATCGTCGGCGGCTGACATGAAGGCGATCAACGAACTGGGATACCTGACCAGCGAGTACGACGTTTATCAGGACGTG ATGGGGGTGAAGGACGAGAGCGAAATCGCGAGCCGCGCGGAGTGGGTGCCGGATAACGTCGTCCTGCGCGCGGACGGTAC ACGCATGCCGGCGTGGCTGACGTGGGACAAGAAGCAATACATGAAACGCTGTCCCACATTCTGGCTGCACACCGCACAAC GCGTGATTCCAAAGGCGCTGGCGGAGCATCCGTACCTGGGGCGCTTCATCGACGTGACCACGGCGGAGAATCTCTATGAG TGCTATGACGAAAAACATCCGCTGGATAAAACCGAGAAGCGGCAGCGCGGCGAGGAGCTGCTGGGCTACGTGCGATCGCT CGGCCTGGTGACGGGCGGCGAGCATGGGCGATGGTGGGCGGTGCCGTACCTGGATTACATCGAGGGGATGATGAGCGGCG GATCGACCTCTTGGCCGTCGGGATGGTTGAAGCGCCCGAAGACCAAAGATGAAGCGTTCACGGACCCGAACGGGCGCGCA TTCCCGAAGTGGGAGGAATACGAAAAATGGGGGATCGGGCACGAGTACCGGGTGCCGCTATGGGAACTGGTGTTCCACGA TTCCGTGATCAGTACGTGGTATTGGGGCGACTCGAGCGACTTCCTGCTGGAGGCCGCGCCCGACGTGACTGCGAAGAAAG ACGCCTTCAACATTCTGTACGGCACGATGCCGATGATGTGGGCGAACGGCGAAGGGTCGTGGGTGAAGAATCGCGAGATG TTCTTGCGCACGTACCGCAATGCGTGCAAGGTGCATGAGGCGGTGGCGACGGCGGAGATGGTGAGCCACGAGTTCGTCAC TGCCGACCGCGCGGTGCAGCGAACGCGATTTTCCGACGGGACGGTGGTGGTGGTGAACTTCGGGGATCACGCGTTCGAGT CGCGGGTGGGCGGGAAAAAGCAGGTGCTGGGGAAGAACGGATTCGCGGTGAAAGGGCCGAGGGTCGAGCAATACCTCGAG TTGGGAAAGTAA
Upstream 100 bases:
>100_bases CCGCTGCGAAGAGGGCGGGAAGTATCAATCTGACTGCCATATGGAACGGGCCTCTGTGCGGATGACGCGGGATTGGGGAA AAGCGTGGAGGGAAAGTAGA
Downstream 100 bases:
>100_bases GTGTGCGCCACGCCAGGCTGCGGTGCACCGTCCGCGGGTGAGATTCAGTCTCCGGGTTAGAGAGGTGTACTCGGAGCAAG GCGTTCCTTCAATTCAGCGG
Product: hypothetical protein
Products: NA
Alternate protein names: Chaperonin GroEL
Number of amino acids: Translated: 643; Mature: 643
Protein sequence:
>643_residues MEFAMWKVWLSGLVLGCLAGNGAVRVARDGERWTLENAELRVTVDAAAASVTVAEKGSRFVWTQMEAKSAAFRGVKQIAG GIGFEVGTMTLKVSLPDHWADLRVEADVADRTAPVDSAGFLSPFLLDSENGAIVVADYSNGHAYPVRMKPFPRRRFDLGN IDMPWIGVCDLTEGQGYALIAETPDDAAFDVVSVEREGHTVSAPRLMWNASMRTFRYPRRVVYRFSASGGYVALAKGYRA YAKEHGLIVPFTEKLKKNPNIARAFGAPDVWGNGSLRFAREAKAAGVEKMLIHGTSSAADMKAINELGYLTSEYDVYQDV MGVKDESEIASRAEWVPDNVVLRADGTRMPAWLTWDKKQYMKRCPTFWLHTAQRVIPKALAEHPYLGRFIDVTTAENLYE CYDEKHPLDKTEKRQRGEELLGYVRSLGLVTGGEHGRWWAVPYLDYIEGMMSGGSTSWPSGWLKRPKTKDEAFTDPNGRA FPKWEEYEKWGIGHEYRVPLWELVFHDSVISTWYWGDSSDFLLEAAPDVTAKKDAFNILYGTMPMMWANGEGSWVKNREM FLRTYRNACKVHEAVATAEMVSHEFVTADRAVQRTRFSDGTVVVVNFGDHAFESRVGGKKQVLGKNGFAVKGPRVEQYLE LGK
Sequences:
>Translated_643_residues MEFAMWKVWLSGLVLGCLAGNGAVRVARDGERWTLENAELRVTVDAAAASVTVAEKGSRFVWTQMEAKSAAFRGVKQIAG GIGFEVGTMTLKVSLPDHWADLRVEADVADRTAPVDSAGFLSPFLLDSENGAIVVADYSNGHAYPVRMKPFPRRRFDLGN IDMPWIGVCDLTEGQGYALIAETPDDAAFDVVSVEREGHTVSAPRLMWNASMRTFRYPRRVVYRFSASGGYVALAKGYRA YAKEHGLIVPFTEKLKKNPNIARAFGAPDVWGNGSLRFAREAKAAGVEKMLIHGTSSAADMKAINELGYLTSEYDVYQDV MGVKDESEIASRAEWVPDNVVLRADGTRMPAWLTWDKKQYMKRCPTFWLHTAQRVIPKALAEHPYLGRFIDVTTAENLYE CYDEKHPLDKTEKRQRGEELLGYVRSLGLVTGGEHGRWWAVPYLDYIEGMMSGGSTSWPSGWLKRPKTKDEAFTDPNGRA FPKWEEYEKWGIGHEYRVPLWELVFHDSVISTWYWGDSSDFLLEAAPDVTAKKDAFNILYGTMPMMWANGEGSWVKNREM FLRTYRNACKVHEAVATAEMVSHEFVTADRAVQRTRFSDGTVVVVNFGDHAFESRVGGKKQVLGKNGFAVKGPRVEQYLE LGK >Mature_643_residues MEFAMWKVWLSGLVLGCLAGNGAVRVARDGERWTLENAELRVTVDAAAASVTVAEKGSRFVWTQMEAKSAAFRGVKQIAG GIGFEVGTMTLKVSLPDHWADLRVEADVADRTAPVDSAGFLSPFLLDSENGAIVVADYSNGHAYPVRMKPFPRRRFDLGN IDMPWIGVCDLTEGQGYALIAETPDDAAFDVVSVEREGHTVSAPRLMWNASMRTFRYPRRVVYRFSASGGYVALAKGYRA YAKEHGLIVPFTEKLKKNPNIARAFGAPDVWGNGSLRFAREAKAAGVEKMLIHGTSSAADMKAINELGYLTSEYDVYQDV MGVKDESEIASRAEWVPDNVVLRADGTRMPAWLTWDKKQYMKRCPTFWLHTAQRVIPKALAEHPYLGRFIDVTTAENLYE CYDEKHPLDKTEKRQRGEELLGYVRSLGLVTGGEHGRWWAVPYLDYIEGMMSGGSTSWPSGWLKRPKTKDEAFTDPNGRA FPKWEEYEKWGIGHEYRVPLWELVFHDSVISTWYWGDSSDFLLEAAPDVTAKKDAFNILYGTMPMMWANGEGSWVKNREM FLRTYRNACKVHEAVATAEMVSHEFVTADRAVQRTRFSDGTVVVVNFGDHAFESRVGGKKQVLGKNGFAVKGPRVEQYLE LGK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 72094; Mature: 72094
Theoretical pI: Translated: 7.04; Mature: 7.04
Prosite motif: PS00761 SPASE_I_3
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 3.1 %Met (Mature Protein) 3.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MEFAMWKVWLSGLVLGCLAGNGAVRVARDGERWTLENAELRVTVDAAAASVTVAEKGSRF CCHHHHHHHHHHHHHHHHCCCCEEEEEECCCEEEEECCEEEEEEECCCEEEEEECCCCEE VWTQMEAKSAAFRGVKQIAGGIGFEVGTMTLKVSLPDHWADLRVEADVADRTAPVDSAGF EEEEHHHHHHHHHHHHHHHCCCCEEEEEEEEEEECCCCCCCEEEEECCCCCCCCCCCCCC LSPFLLDSENGAIVVADYSNGHAYPVRMKPFPRRRFDLGNIDMPWIGVCDLTEGQGYALI CCCEEEECCCCEEEEEECCCCCEEEEECCCCCCCCCCCCCCCCCEEEEEECCCCCCEEEE AETPDDAAFDVVSVEREGHTVSAPRLMWNASMRTFRYPRRVVYRFSASGGYVALAKGYRA EECCCCCCEEEEEEECCCCEECCCCEEECCCHHHHHCCCEEEEEEECCCCEEEEECCHHH YAKEHGLIVPFTEKLKKNPNIARAFGAPDVWGNGSLRFAREAKAAGVEKMLIHGTSSAAD HHHHCCEEEEEHHHHCCCCCEEEECCCCCCCCCCCEEEEHHHHHCCCEEEEEECCCCHHH MKAINELGYLTSEYDVYQDVMGVKDESEIASRAEWVPDNVVLRADGTRMPAWLTWDKKQY HHHHHHHHCCCCHHHHHHHHHCCCCHHHHHHHHCCCCCCEEEEECCCCCCEEEEECHHHH MKRCPTFWLHTAQRVIPKALAEHPYLGRFIDVTTAENLYECYDEKHPLDKTEKRQRGEEL HHHCCHHHHHHHHHHHHHHHHCCCCCCEEEEECCHHHHHHHHHCCCCCCHHHHHHHHHHH LGYVRSLGLVTGGEHGRWWAVPYLDYIEGMMSGGSTSWPSGWLKRPKTKDEAFTDPNGRA HHHHHHHCCEECCCCCCEEECCHHHHHHHHHCCCCCCCCCHHHCCCCCCCCCCCCCCCCC FPKWEEYEKWGIGHEYRVPLWELVFHDSVISTWYWGDSSDFLLEAAPDVTAKKDAFNILY CCCHHHHHHCCCCCCCCCCHHHHHHHHHHHEEEEECCCCCEEEECCCCCCCCCHHHHEEE GTMPMMWANGEGSWVKNREMFLRTYRNACKVHEAVATAEMVSHEFVTADRAVQRTRFSDG CCCCEEEECCCCCEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC TVVVVNFGDHAFESRVGGKKQVLGKNGFAVKGPRVEQYLELGK CEEEEECCCHHHHHHCCCCHHCCCCCCCEECCCCHHHHHHCCC >Mature Secondary Structure MEFAMWKVWLSGLVLGCLAGNGAVRVARDGERWTLENAELRVTVDAAAASVTVAEKGSRF CCHHHHHHHHHHHHHHHHCCCCEEEEEECCCEEEEECCEEEEEEECCCEEEEEECCCCEE VWTQMEAKSAAFRGVKQIAGGIGFEVGTMTLKVSLPDHWADLRVEADVADRTAPVDSAGF EEEEHHHHHHHHHHHHHHHCCCCEEEEEEEEEEECCCCCCCEEEEECCCCCCCCCCCCCC LSPFLLDSENGAIVVADYSNGHAYPVRMKPFPRRRFDLGNIDMPWIGVCDLTEGQGYALI CCCEEEECCCCEEEEEECCCCCEEEEECCCCCCCCCCCCCCCCCEEEEEECCCCCCEEEE AETPDDAAFDVVSVEREGHTVSAPRLMWNASMRTFRYPRRVVYRFSASGGYVALAKGYRA EECCCCCCEEEEEEECCCCEECCCCEEECCCHHHHHCCCEEEEEEECCCCEEEEECCHHH YAKEHGLIVPFTEKLKKNPNIARAFGAPDVWGNGSLRFAREAKAAGVEKMLIHGTSSAAD HHHHCCEEEEEHHHHCCCCCEEEECCCCCCCCCCCEEEEHHHHHCCCEEEEEECCCCHHH MKAINELGYLTSEYDVYQDVMGVKDESEIASRAEWVPDNVVLRADGTRMPAWLTWDKKQY HHHHHHHHCCCCHHHHHHHHHCCCCHHHHHHHHCCCCCCEEEEECCCCCCEEEEECHHHH MKRCPTFWLHTAQRVIPKALAEHPYLGRFIDVTTAENLYECYDEKHPLDKTEKRQRGEEL HHHCCHHHHHHHHHHHHHHHHCCCCCCEEEEECCHHHHHHHHHCCCCCCHHHHHHHHHHH LGYVRSLGLVTGGEHGRWWAVPYLDYIEGMMSGGSTSWPSGWLKRPKTKDEAFTDPNGRA HHHHHHHCCEECCCCCCEEECCHHHHHHHHHCCCCCCCCCHHHCCCCCCCCCCCCCCCCC FPKWEEYEKWGIGHEYRVPLWELVFHDSVISTWYWGDSSDFLLEAAPDVTAKKDAFNILY CCCHHHHHHCCCCCCCCCCHHHHHHHHHHHEEEEECCCCCEEEECCCCCCCCCHHHHEEE GTMPMMWANGEGSWVKNREMFLRTYRNACKVHEAVATAEMVSHEFVTADRAVQRTRFSDG CCCCEEEECCCCCEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC TVVVVNFGDHAFESRVGGKKQVLGKNGFAVKGPRVEQYLELGK CEEEEECCCHHHHHHCCCCHHCCCCCCCEECCCCHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA