| Definition | Candidatus Solibacter usitatus Ellin6076 chromosome, complete genome. |
|---|---|
| Accession | NC_008536 |
| Length | 9,965,640 |
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The map label for this gene is 116621575
Identifier: 116621575
GI number: 116621575
Start: 3122562
End: 3124046
Strand: Reverse
Name: 116621575
Synonym: Acid_2457
Alternate gene names: NA
Gene position: 3124046-3122562 (Counterclockwise)
Preceding gene: 116621576
Following gene: 116621574
Centisome position: 31.35
GC content: 62.42
Gene sequence:
>1485_bases ATGATTTCGCGACGGATGTTTGTGGGAGCGATGGCGGCGGCGCCCTTAGTGACGACGCCGTTAATGGCGGCCGACGAGCC GTGGATCCCGTTATTCAACGGGAATGACCTGGAAGGCTGGCGGCCGAGCGAGCACAAAGATTCGTGGAAGATCCGGGACG GACAGATTTCGGCGGAAGGGCCGCGGTCGCACCTGTTCTACACGGGGCGGGAGTTCAAGAACTTCGAACTGGAAGTGGAG GCGCTGGCGCGTCCGGCGTGCAACTCGGGCGTATACTTCCACACGGCGTACCAGGAGAGCGGTTTCCCGATCAAGGGCTT CGAAATCCAGATCAACAACACGGCGACCGGGGAAGGCACGTACCGGGAACGCAAGAAGACGGGGTCGCTGTACGGGCTGC GCAATGTGTACAAGCAACTGGTGGCGGACGACCGGTGGTTCAAGCTGCACGCGCTGGTGCGCGGGAAGAACGTGCAGATC CGGATCGACGGCATGCTGGTGGTGGATTACACGGAGCCCGTGCCGCCGGTGATTCCGGACGGCATGGAGAAGGAGCGGTT CCTGAGCAGCGGGACGATCGCGCTGCAATGCCACAACGAAGGATCGCTGGCGCGATTCCGGAGCGTGAGGATCCGGCCGC TGGCGGACGATGCGACGGCGCCGGGAGCGGTATCGCCGGTGGTGGACGAGACGTTCAGGAAGGTGATCGACACGGGGCGG CACAATTACCCGATGGTGGATTATCACGTCCATTTGAAGAGCGGGCTGACGCTGGAGCAGGCGCTGGCGCGGTCGCGGCG CGACGGAATTCAGTACGGGATCGCAGTGAACTGCGGAAAGGGATTCCCGATCGAGAGCGACTCGGGGGCGATCGCGTTCT ATGAAAGCATGAAGGGGCAGCCGTGCTTCATCGCGATGCAGGCGGAGGGCCGCGAGTGGATGCAGATGTTCACGCGCAAG GCGGCGGGGCTGTTCGACTATATCTTCACGGACTCGATGACGTGGACGGACAATCATGGGAAGCGGATGCGCACGTGGAT TCCGGAGGAAGTGGGGACGATCGCGGACGCGCAGGAGTTCATGGACACGCTGGTGAGCCGCGCGGTGGGGATCCTACAGA ATGAGCCGATCGATATCTACGTGAATCCGACGTACATTCCCGATCAACTGGCGAAGGACTACGACCGTCTGTGGACACCG GAGCGAATGGGCAAGGTGGTGGACGCGGCGGCGAAGAACCATGTGGCGATCGAATTGAACGACCGGTACAAGCTGCCGGG CGCGGCGTTCGTGAAGATGGCGAAGGCGGCGGGCTGCAAGTTCACCTTCGGTACGAATAATACGGGGCCGGAGGATTTGC GGCGGAGCGAGTACGGCCTGAACATGATCGACGAGTGTAAGCTGGCGTCGCAGGACTTCTTCGTGCCGGGCGCGTGGTGG CCGAAGGCGAGCGAGAGGAAAGGGAATTTGCTGAAGGCGGGGTAG
Upstream 100 bases:
>100_bases ACCTCGACCGGGCCATGATGGAGACCTTAACTTCGATTACGCGGGCGGGAGCGAAGATCATATTGACGTATTTCGCAAAG CCGGCGGCAAGGATGTTGGG
Downstream 100 bases:
>100_bases GACGGGCTGTCCATTTTCGGACAGCGGGTTCCGAATCCGACCAGAGGGCGATTCCCTGCCCTGGAATTTTCAAGCGGTTG GCCTGGAATAGCGCGTGCGG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 494; Mature: 494
Protein sequence:
>494_residues MISRRMFVGAMAAAPLVTTPLMAADEPWIPLFNGNDLEGWRPSEHKDSWKIRDGQISAEGPRSHLFYTGREFKNFELEVE ALARPACNSGVYFHTAYQESGFPIKGFEIQINNTATGEGTYRERKKTGSLYGLRNVYKQLVADDRWFKLHALVRGKNVQI RIDGMLVVDYTEPVPPVIPDGMEKERFLSSGTIALQCHNEGSLARFRSVRIRPLADDATAPGAVSPVVDETFRKVIDTGR HNYPMVDYHVHLKSGLTLEQALARSRRDGIQYGIAVNCGKGFPIESDSGAIAFYESMKGQPCFIAMQAEGREWMQMFTRK AAGLFDYIFTDSMTWTDNHGKRMRTWIPEEVGTIADAQEFMDTLVSRAVGILQNEPIDIYVNPTYIPDQLAKDYDRLWTP ERMGKVVDAAAKNHVAIELNDRYKLPGAAFVKMAKAAGCKFTFGTNNTGPEDLRRSEYGLNMIDECKLASQDFFVPGAWW PKASERKGNLLKAG
Sequences:
>Translated_494_residues MISRRMFVGAMAAAPLVTTPLMAADEPWIPLFNGNDLEGWRPSEHKDSWKIRDGQISAEGPRSHLFYTGREFKNFELEVE ALARPACNSGVYFHTAYQESGFPIKGFEIQINNTATGEGTYRERKKTGSLYGLRNVYKQLVADDRWFKLHALVRGKNVQI RIDGMLVVDYTEPVPPVIPDGMEKERFLSSGTIALQCHNEGSLARFRSVRIRPLADDATAPGAVSPVVDETFRKVIDTGR HNYPMVDYHVHLKSGLTLEQALARSRRDGIQYGIAVNCGKGFPIESDSGAIAFYESMKGQPCFIAMQAEGREWMQMFTRK AAGLFDYIFTDSMTWTDNHGKRMRTWIPEEVGTIADAQEFMDTLVSRAVGILQNEPIDIYVNPTYIPDQLAKDYDRLWTP ERMGKVVDAAAKNHVAIELNDRYKLPGAAFVKMAKAAGCKFTFGTNNTGPEDLRRSEYGLNMIDECKLASQDFFVPGAWW PKASERKGNLLKAG >Mature_494_residues MISRRMFVGAMAAAPLVTTPLMAADEPWIPLFNGNDLEGWRPSEHKDSWKIRDGQISAEGPRSHLFYTGREFKNFELEVE ALARPACNSGVYFHTAYQESGFPIKGFEIQINNTATGEGTYRERKKTGSLYGLRNVYKQLVADDRWFKLHALVRGKNVQI RIDGMLVVDYTEPVPPVIPDGMEKERFLSSGTIALQCHNEGSLARFRSVRIRPLADDATAPGAVSPVVDETFRKVIDTGR HNYPMVDYHVHLKSGLTLEQALARSRRDGIQYGIAVNCGKGFPIESDSGAIAFYESMKGQPCFIAMQAEGREWMQMFTRK AAGLFDYIFTDSMTWTDNHGKRMRTWIPEEVGTIADAQEFMDTLVSRAVGILQNEPIDIYVNPTYIPDQLAKDYDRLWTP ERMGKVVDAAAKNHVAIELNDRYKLPGAAFVKMAKAAGCKFTFGTNNTGPEDLRRSEYGLNMIDECKLASQDFFVPGAWW PKASERKGNLLKAG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 55494; Mature: 55494
Theoretical pI: Translated: 7.29; Mature: 7.29
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 3.4 %Met (Translated Protein) 4.7 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 3.4 %Met (Mature Protein) 4.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MISRRMFVGAMAAAPLVTTPLMAADEPWIPLFNGNDLEGWRPSEHKDSWKIRDGQISAEG CCCCHHHHHHHHHCCHHHCCCCCCCCCCEEEECCCCCCCCCCCCCCCCCEEECCEECCCC PRSHLFYTGREFKNFELEVEALARPACNSGVYFHTAYQESGFPIKGFEIQINNTATGEGT CCCCEEEECCCCCCEEEEEHHHCCCCCCCCEEEEEEECCCCCCEEEEEEEECCCCCCCCH YRERKKTGSLYGLRNVYKQLVADDRWFKLHALVRGKNVQIRIDGMLVVDYTEPVPPVIPD HHHHHHCCCHHHHHHHHHHHHCCCCEEEEEEEEECCEEEEEECCEEEEECCCCCCCCCCC GMEKERFLSSGTIALQCHNEGSLARFRSVRIRPLADDATAPGAVSPVVDETFRKVIDTGR CCCHHHHHCCCEEEEEECCCCCHHHHHEEEEEECCCCCCCCCCCCHHHHHHHHHHHHCCC HNYPMVDYHVHLKSGLTLEQALARSRRDGIQYGIAVNCGKGFPIESDSGAIAFYESMKGQ CCCCEEEEEEEECCCCCHHHHHHHHHHCCCEEEEEEECCCCCCCCCCCCCEEEEECCCCC PCFIAMQAEGREWMQMFTRKAAGLFDYIFTDSMTWTDNHGKRMRTWIPEEVGTIADAQEF CEEEEEECCCHHHHHHHHHHHHHHHHHHHCCCEEEECCCCCEEHHCCCHHHHHHHHHHHH MDTLVSRAVGILQNEPIDIYVNPTYIPDQLAKDYDRLWTPERMGKVVDAAAKNHVAIELN HHHHHHHHHHHHCCCCEEEEECCCCCHHHHHHHHHHCCCHHHHHHHHHHHCCCCEEEEEC DRYKLPGAAFVKMAKAAGCKFTFGTNNTGPEDLRRSEYGLNMIDECKLASQDFFVPGAWW CCCCCCHHHHHHHHHHCCCEEEECCCCCCHHHHHHHHCCCCHHHHHHHCCCCEECCCCCC PKASERKGNLLKAG CCCCCCCCCCCCCC >Mature Secondary Structure MISRRMFVGAMAAAPLVTTPLMAADEPWIPLFNGNDLEGWRPSEHKDSWKIRDGQISAEG CCCCHHHHHHHHHCCHHHCCCCCCCCCCEEEECCCCCCCCCCCCCCCCCEEECCEECCCC PRSHLFYTGREFKNFELEVEALARPACNSGVYFHTAYQESGFPIKGFEIQINNTATGEGT CCCCEEEECCCCCCEEEEEHHHCCCCCCCCEEEEEEECCCCCCEEEEEEEECCCCCCCCH YRERKKTGSLYGLRNVYKQLVADDRWFKLHALVRGKNVQIRIDGMLVVDYTEPVPPVIPD HHHHHHCCCHHHHHHHHHHHHCCCCEEEEEEEEECCEEEEEECCEEEEECCCCCCCCCCC GMEKERFLSSGTIALQCHNEGSLARFRSVRIRPLADDATAPGAVSPVVDETFRKVIDTGR CCCHHHHHCCCEEEEEECCCCCHHHHHEEEEEECCCCCCCCCCCCHHHHHHHHHHHHCCC HNYPMVDYHVHLKSGLTLEQALARSRRDGIQYGIAVNCGKGFPIESDSGAIAFYESMKGQ CCCCEEEEEEEECCCCCHHHHHHHHHHCCCEEEEEEECCCCCCCCCCCCCEEEEECCCCC PCFIAMQAEGREWMQMFTRKAAGLFDYIFTDSMTWTDNHGKRMRTWIPEEVGTIADAQEF CEEEEEECCCHHHHHHHHHHHHHHHHHHHCCCEEEECCCCCEEHHCCCHHHHHHHHHHHH MDTLVSRAVGILQNEPIDIYVNPTYIPDQLAKDYDRLWTPERMGKVVDAAAKNHVAIELN HHHHHHHHHHHHCCCCEEEEECCCCCHHHHHHHHHHCCCHHHHHHHHHHHCCCCEEEEEC DRYKLPGAAFVKMAKAAGCKFTFGTNNTGPEDLRRSEYGLNMIDECKLASQDFFVPGAWW CCCCCCHHHHHHHHHHCCCEEEECCCCCCHHHHHHHHCCCCHHHHHHHCCCCEECCCCCC PKASERKGNLLKAG CCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA