| Definition | Candidatus Solibacter usitatus Ellin6076 chromosome, complete genome. |
|---|---|
| Accession | NC_008536 |
| Length | 9,965,640 |
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The map label for this gene is 116621480
Identifier: 116621480
GI number: 116621480
Start: 3009070
End: 3009759
Strand: Direct
Name: 116621480
Synonym: Acid_2362
Alternate gene names: NA
Gene position: 3009070-3009759 (Clockwise)
Preceding gene: 116621478
Following gene: 116621481
Centisome position: 30.19
GC content: 61.59
Gene sequence:
>690_bases ATGGCAACTCAGAAACAAATCGCCGCCAATCGCGAAAACGCGAAGCGATCCACCGGTCCTCGCACCGAGCAGGGCAAACG CATTTGCCGCATGAACGCACTCAAACACGGGATCGACTCCCGTGAAGAACTCTCCTGCGGCGAAAGCCCTGTCGAACTCC ACGAGCTCGCCGCCGAGTACGACCACGAGTTCCAACCCGTCGGCCTCGCCGAGCGCGTTCTCGTCGATCTCCTCATCCGC AAGGACTGGCTCATGCGCCGCCACGCCTTCCTCCAGGCCGACCTCACCAATTACGGCGTCCTCATCGCCTCCAAAACCAA GGACGGCAATGAATACGGCTCCGGCTTTACCCAGAACCTCGACGCCAACAACCGACTCCACCGCCACATGGTCGATACCG AGCGTGCCTACTTCCGCTACCTTGAGGAATTGGAACACCGCCAAGCCGACCGCCGCCGCCACCAGGGGGCGGTGGACGCC TCCGCAACTCCCTCATCTGAAGCGGAAAACGCCGAAATTGGGTCCGTTTCGCAGGCGTCCCCGGATCGCCCGCGCCGGAT ACCCGATCAGCCTTCCGCCCACCTCAAACACCTCAGTCCCCTTGCCCAATTTGCCGCCGCCGACCCCGGTTCTTCCCCCG ATTGCGATCCTCCTCACACAAATGAGGCCATTCCTATTGACCGTAAGTAA
Upstream 100 bases:
>100_bases CCCAGTCACGCCAACTTGATTTTTCTTTTCCCCACAGCCTCAACCATTTACAGACGTTGGCGTCCGAAACCCGTCCCCCG CCTGCTACTCCTGGAAACGT
Downstream 100 bases:
>100_bases GTACTGACTTACAATGGGGTCTGATGTCCGTAACCCCTCGTCTCTCAGCCCCGGATCGCCGTCGCCAGCTCCTCGAAACC GCGCTCGATCTCTTCTCGCG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 229; Mature: 228
Protein sequence:
>229_residues MATQKQIAANRENAKRSTGPRTEQGKRICRMNALKHGIDSREELSCGESPVELHELAAEYDHEFQPVGLAERVLVDLLIR KDWLMRRHAFLQADLTNYGVLIASKTKDGNEYGSGFTQNLDANNRLHRHMVDTERAYFRYLEELEHRQADRRRHQGAVDA SATPSSEAENAEIGSVSQASPDRPRRIPDQPSAHLKHLSPLAQFAAADPGSSPDCDPPHTNEAIPIDRK
Sequences:
>Translated_229_residues MATQKQIAANRENAKRSTGPRTEQGKRICRMNALKHGIDSREELSCGESPVELHELAAEYDHEFQPVGLAERVLVDLLIR KDWLMRRHAFLQADLTNYGVLIASKTKDGNEYGSGFTQNLDANNRLHRHMVDTERAYFRYLEELEHRQADRRRHQGAVDA SATPSSEAENAEIGSVSQASPDRPRRIPDQPSAHLKHLSPLAQFAAADPGSSPDCDPPHTNEAIPIDRK >Mature_228_residues ATQKQIAANRENAKRSTGPRTEQGKRICRMNALKHGIDSREELSCGESPVELHELAAEYDHEFQPVGLAERVLVDLLIRK DWLMRRHAFLQADLTNYGVLIASKTKDGNEYGSGFTQNLDANNRLHRHMVDTERAYFRYLEELEHRQADRRRHQGAVDAS ATPSSEAENAEIGSVSQASPDRPRRIPDQPSAHLKHLSPLAQFAAADPGSSPDCDPPHTNEAIPIDRK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 25691; Mature: 25560
Theoretical pI: Translated: 6.74; Mature: 6.74
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MATQKQIAANRENAKRSTGPRTEQGKRICRMNALKHGIDSREELSCGESPVELHELAAEY CCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCHHHHCCCCCHHHHHHHHHHH DHEFQPVGLAERVLVDLLIRKDWLMRRHAFLQADLTNYGVLIASKTKDGNEYGSGFTQNL CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCHHHCCCCCCCC DANNRLHRHMVDTERAYFRYLEELEHRQADRRRHQGAVDASATPSSEAENAEIGSVSQAS CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCC PDRPRRIPDQPSAHLKHLSPLAQFAAADPGSSPDCDPPHTNEAIPIDRK CCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure ATQKQIAANRENAKRSTGPRTEQGKRICRMNALKHGIDSREELSCGESPVELHELAAEY CCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCHHHHCCCCCHHHHHHHHHHH DHEFQPVGLAERVLVDLLIRKDWLMRRHAFLQADLTNYGVLIASKTKDGNEYGSGFTQNL CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCHHHCCCCCCCC DANNRLHRHMVDTERAYFRYLEELEHRQADRRRHQGAVDASATPSSEAENAEIGSVSQAS CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCC PDRPRRIPDQPSAHLKHLSPLAQFAAADPGSSPDCDPPHTNEAIPIDRK CCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA