| Definition | Candidatus Solibacter usitatus Ellin6076 chromosome, complete genome. |
|---|---|
| Accession | NC_008536 |
| Length | 9,965,640 |
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The map label for this gene is 116621478
Identifier: 116621478
GI number: 116621478
Start: 3006869
End: 3007711
Strand: Direct
Name: 116621478
Synonym: Acid_2360
Alternate gene names: NA
Gene position: 3006869-3007711 (Clockwise)
Preceding gene: 116621477
Following gene: 116621480
Centisome position: 30.17
GC content: 64.18
Gene sequence:
>843_bases ATGCCCGCGTTGCGCGCATCGGAATGGATCACCCTGCTGGCCTTCTCCTGGTTCAGCGTCCTCGCCTGCGGCCGGCGCAG GCTGGATCCAAACCGCCGGGTCACGATTTTAGCGTTCGGGTTGGGCGCAATTGCCATCACGATCTTCGCATCTTTGGTGT TGTCTCACTGGGTGCCGCCGCAGACCGCCTCGATCGTTCGCGATTGGGTTCCGTATCTCTTCCTGTTCCTGTTCTATTCG CAGGGCGGGCAATTCGTCACCGGCGCCGACCGCGAATTGGAAACGAGGCTGTTACGGCTTGATCAGAGCATCGTTGCGCC GCCGCTCGAATGGTGTGCCGGGAATCCGGCGCGAGTCTGGATCTTCACGTACCTCGAACTCGCGTACATGTCGTATTACC CGGTGCTGCCCCTGTCGCTCGCTGTGCTCTATCTCTCGGGCCGGCAGGCAGACGCCGCCCGGTTCTGGACGGTGGTCCTG CTGGCCGCGTACGGATCTTGTGGAACCCTTCCCTACATTCAGATACGGCCGCCCCGGATGCTCGGAGAGAAGTGGAGTGC CGGGCTGCCATCCGGACGCGTGCGAGCCTTCAATCTGTGGATCCTCCAGCGCGGCAGCATTCAGGCCAACACGCTTCCCA GCGCGCACGTGGCCATCACAACCGCCTGCGCCCTCAGCCTGCTGCGGCTCGGCCCCGTTTCGGCGGCAGTGGTCTTTTTG TGGATCGCCGTGAGCGTCGCGCTCGGCGCGGTAGCCGGACGCTACCATTACGCGCTCGACGCGATTCTCGGCTTCCTCGT CGCCGGCACAGCCCTGGCGGTCGGCGTCATCCTCTTCCCGTAG
Upstream 100 bases:
>100_bases CGCCGGCTCTGGTATCTGCACTGAGTTGGATGTTCCTCGACGGCCCCGCGAAGCGAGTGCTGAGCAAAGTCGCCCTACGC CTTTTGAGGGCGCGATCGTG
Downstream 100 bases:
>100_bases GCTGGAGCGTTCGGGTCGAGTACGTGCTCAAGTGGACGGAGCAACCTTCTCCATCTGCTTCAGCTTCTCCGTCATGGCAA TGGCGCGCTGGATTTCCTCA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 280; Mature: 279
Protein sequence:
>280_residues MPALRASEWITLLAFSWFSVLACGRRRLDPNRRVTILAFGLGAIAITIFASLVLSHWVPPQTASIVRDWVPYLFLFLFYS QGGQFVTGADRELETRLLRLDQSIVAPPLEWCAGNPARVWIFTYLELAYMSYYPVLPLSLAVLYLSGRQADAARFWTVVL LAAYGSCGTLPYIQIRPPRMLGEKWSAGLPSGRVRAFNLWILQRGSIQANTLPSAHVAITTACALSLLRLGPVSAAVVFL WIAVSVALGAVAGRYHYALDAILGFLVAGTALAVGVILFP
Sequences:
>Translated_280_residues MPALRASEWITLLAFSWFSVLACGRRRLDPNRRVTILAFGLGAIAITIFASLVLSHWVPPQTASIVRDWVPYLFLFLFYS QGGQFVTGADRELETRLLRLDQSIVAPPLEWCAGNPARVWIFTYLELAYMSYYPVLPLSLAVLYLSGRQADAARFWTVVL LAAYGSCGTLPYIQIRPPRMLGEKWSAGLPSGRVRAFNLWILQRGSIQANTLPSAHVAITTACALSLLRLGPVSAAVVFL WIAVSVALGAVAGRYHYALDAILGFLVAGTALAVGVILFP >Mature_279_residues PALRASEWITLLAFSWFSVLACGRRRLDPNRRVTILAFGLGAIAITIFASLVLSHWVPPQTASIVRDWVPYLFLFLFYSQ GGQFVTGADRELETRLLRLDQSIVAPPLEWCAGNPARVWIFTYLELAYMSYYPVLPLSLAVLYLSGRQADAARFWTVVLL AAYGSCGTLPYIQIRPPRMLGEKWSAGLPSGRVRAFNLWILQRGSIQANTLPSAHVAITTACALSLLRLGPVSAAVVFLW IAVSVALGAVAGRYHYALDAILGFLVAGTALAVGVILFP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 30669; Mature: 30538
Theoretical pI: Translated: 9.87; Mature: 9.87
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 0.7 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPALRASEWITLLAFSWFSVLACGRRRLDPNRRVTILAFGLGAIAITIFASLVLSHWVPP CCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEEHHHHHHHHHHHHHHHHHCCCC QTASIVRDWVPYLFLFLFYSQGGQFVTGADRELETRLLRLDQSIVAPPLEWCAGNPARVW CHHHHHHHHHHHHHHHHHHHCCCCEEECCCHHHHHHHHHHHHHHCCCCHHHHCCCCCEEH IFTYLELAYMSYYPVLPLSLAVLYLSGRQADAARFWTVVLLAAYGSCGTLPYIQIRPPRM HHHHHHHHHHHHCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCCCCEEEECCCHH LGEKWSAGLPSGRVRAFNLWILQRGSIQANTLPSAHVAITTACALSLLRLGPVSAAVVFL HCCCCCCCCCCCCEEEEEEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHCHHHHHHHHH WIAVSVALGAVAGRYHYALDAILGFLVAGTALAVGVILFP HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure PALRASEWITLLAFSWFSVLACGRRRLDPNRRVTILAFGLGAIAITIFASLVLSHWVPP CCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEEHHHHHHHHHHHHHHHHHCCCC QTASIVRDWVPYLFLFLFYSQGGQFVTGADRELETRLLRLDQSIVAPPLEWCAGNPARVW CHHHHHHHHHHHHHHHHHHHCCCCEEECCCHHHHHHHHHHHHHHCCCCHHHHCCCCCEEH IFTYLELAYMSYYPVLPLSLAVLYLSGRQADAARFWTVVLLAAYGSCGTLPYIQIRPPRM HHHHHHHHHHHHCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCCCCEEEECCCHH LGEKWSAGLPSGRVRAFNLWILQRGSIQANTLPSAHVAITTACALSLLRLGPVSAAVVFL HCCCCCCCCCCCCEEEEEEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHCHHHHHHHHH WIAVSVALGAVAGRYHYALDAILGFLVAGTALAVGVILFP HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA