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The map label for this gene is pqqE [H]

Identifier: 116621477

GI number: 116621477

Start: 3005805

End: 3006869

Strand: Direct

Name: pqqE [H]

Synonym: Acid_2359

Alternate gene names: 116621477

Gene position: 3005805-3006869 (Clockwise)

Preceding gene: 116621467

Following gene: 116621478

Centisome position: 30.16

GC content: 63.57

Gene sequence:

>1065_bases
ATGTTCGCCCGTGCGATGGCTTCCCCGCATCATCCCATCCTGGCGCAGATCGTCCCCATGCGCCGCTGCAACCTCGCCTG
TACCTACTGCAATGAATTCGACGCATTCTCCCCGCCGGTGCCTTTCCCCGCGATGAAAGAGCGTCTCGACCGGTTGGCCG
ATTTGGGCATCACCATCATCACGGTCAGCGGCGGTGAGCCCATGCTGCATCCCGACCTGGATGACATCATCCGGCACATC
CGGCGCCGCGGGATCCTCGCCACCCTCATCACCAACGGCTACTTGCTGACCGCCGAGCGCATTCGCGCGCTCAATCGAGC
CGGCCTGGACTACCTGCAGATCAGCATCGACAACGTCTCTCCCGATGAAACCTCGAAAAAGAGCCTGAAGGTGCTGAACC
GAAAGCTGGAGCTGCTGGCGGAGCACGCCGAATTCGCGGTCACGGTGAATTCGGTGCTCGGCAGTCCGGTGCGCAACCCT
CAGGATGCGCGCACCATCGCCCTGCGTGCCCGAGCCCTCGGCCTCACCAGCACGCTCGGAATCCTCCATGATGGCAGCGG
CCGGCTGCAGCCATTGAACCCGGAACACTTGAATATCTATCGCGAGTTGGCGCAGCCCCGCCAGGCGATGTTCTCCTTCG
CGCAGTACGATCGCTTTCAGAACAACATCTCCCAGGGCCTGCCGAATCGATGGCACTGCCGCGCCGGAGGCCGGTTTCTC
TACATCTGCGAAGACGGGCTGGTCCACTACTGCTCTCAACAGCGCGGCCGGCCCGGCATTCCCCTCGACCAGTACACCCG
CCAGGACGTGGAGCGCGAGGCAGCCGTCGAGAAACCCTGCGCGCCCTACTGCACCGTATCCTGCGTCCACCAGACCGCCA
TGCTCGATGCTTTCTGCGAAAACCCGCGGCAGGTTCTACTCGAAATGGTGGCCGCGCGCGAACAGCGCGAGCCCGGATAC
CGGCCGCCGGCTCTGGTATCTGCACTGAGTTGGATGTTCCTCGACGGCCCCGCGAAGCGAGTGCTGAGCAAAGTCGCCCT
ACGCCTTTTGAGGGCGCGATCGTGA

Upstream 100 bases:

>100_bases
ACTGGTAATAGCGATGCGCGAGGGGGAACACAGCCGGCCTCGACGATTGCGGGTTCACCGCGCACTCCGAACCGTGCACC
GGCGCTTGCGAGAGGCGCGC

Downstream 100 bases:

>100_bases
TGCCCGCGTTGCGCGCATCGGAATGGATCACCCTGCTGGCCTTCTCCTGGTTCAGCGTCCTCGCCTGCGGCCGGCGCAGG
CTGGATCCAAACCGCCGGGT

Product: radical SAM domain-containing protein

Products: NA

Alternate protein names: Pyrroloquinoline quinone biosynthesis protein E [H]

Number of amino acids: Translated: 354; Mature: 354

Protein sequence:

>354_residues
MFARAMASPHHPILAQIVPMRRCNLACTYCNEFDAFSPPVPFPAMKERLDRLADLGITIITVSGGEPMLHPDLDDIIRHI
RRRGILATLITNGYLLTAERIRALNRAGLDYLQISIDNVSPDETSKKSLKVLNRKLELLAEHAEFAVTVNSVLGSPVRNP
QDARTIALRARALGLTSTLGILHDGSGRLQPLNPEHLNIYRELAQPRQAMFSFAQYDRFQNNISQGLPNRWHCRAGGRFL
YICEDGLVHYCSQQRGRPGIPLDQYTRQDVEREAAVEKPCAPYCTVSCVHQTAMLDAFCENPRQVLLEMVAAREQREPGY
RPPALVSALSWMFLDGPAKRVLSKVALRLLRARS

Sequences:

>Translated_354_residues
MFARAMASPHHPILAQIVPMRRCNLACTYCNEFDAFSPPVPFPAMKERLDRLADLGITIITVSGGEPMLHPDLDDIIRHI
RRRGILATLITNGYLLTAERIRALNRAGLDYLQISIDNVSPDETSKKSLKVLNRKLELLAEHAEFAVTVNSVLGSPVRNP
QDARTIALRARALGLTSTLGILHDGSGRLQPLNPEHLNIYRELAQPRQAMFSFAQYDRFQNNISQGLPNRWHCRAGGRFL
YICEDGLVHYCSQQRGRPGIPLDQYTRQDVEREAAVEKPCAPYCTVSCVHQTAMLDAFCENPRQVLLEMVAAREQREPGY
RPPALVSALSWMFLDGPAKRVLSKVALRLLRARS
>Mature_354_residues
MFARAMASPHHPILAQIVPMRRCNLACTYCNEFDAFSPPVPFPAMKERLDRLADLGITIITVSGGEPMLHPDLDDIIRHI
RRRGILATLITNGYLLTAERIRALNRAGLDYLQISIDNVSPDETSKKSLKVLNRKLELLAEHAEFAVTVNSVLGSPVRNP
QDARTIALRARALGLTSTLGILHDGSGRLQPLNPEHLNIYRELAQPRQAMFSFAQYDRFQNNISQGLPNRWHCRAGGRFL
YICEDGLVHYCSQQRGRPGIPLDQYTRQDVEREAAVEKPCAPYCTVSCVHQTAMLDAFCENPRQVLLEMVAAREQREPGY
RPPALVSALSWMFLDGPAKRVLSKVALRLLRARS

Specific function: Together With Moac, Is Involved In The Conversion Of A Guanosine Derivative (Gxp) Into Molybdopterin Precursor Z. [C]

COG id: COG0535

COG function: function code R; Predicted Fe-S oxidoreductases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the radical SAM superfamily. PqqE family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013785
- InterPro:   IPR006638
- InterPro:   IPR000385
- InterPro:   IPR017200
- InterPro:   IPR011843
- InterPro:   IPR007197 [H]

Pfam domain/function: PF04055 Radical_SAM [H]

EC number: NA

Molecular weight: Translated: 39771; Mature: 39771

Theoretical pI: Translated: 8.98; Mature: 8.98

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.8 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
5.4 %Cys+Met (Translated Protein)
2.8 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
5.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFARAMASPHHPILAQIVPMRRCNLACTYCNEFDAFSPPVPFPAMKERLDRLADLGITII
CCCCCCCCCCCCHHHHHHHHHHCCEEEEECCCCCCCCCCCCCHHHHHHHHHHHHCCEEEE
TVSGGEPMLHPDLDDIIRHIRRRGILATLITNGYLLTAERIRALNRAGLDYLQISIDNVS
EECCCCCCCCCCHHHHHHHHHHCCHHHHHHHCCEEEEHHHHHHHHHCCCEEEEEEECCCC
PDETSKKSLKVLNRKLELLAEHAEFAVTVNSVLGSPVRNPQDARTIALRARALGLTSTLG
CCCHHHHHHHHHHHHHHHHHHHHHHHEEHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHH
ILHDGSGRLQPLNPEHLNIYRELAQPRQAMFSFAQYDRFQNNISQGLPNRWHCRAGGRFL
HEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEECCCCEEE
YICEDGLVHYCSQQRGRPGIPLDQYTRQDVEREAAVEKPCAPYCTVSCVHQTAMLDAFCE
EEECCHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHC
NPRQVLLEMVAAREQREPGYRPPALVSALSWMFLDGPAKRVLSKVALRLLRARS
CHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MFARAMASPHHPILAQIVPMRRCNLACTYCNEFDAFSPPVPFPAMKERLDRLADLGITII
CCCCCCCCCCCCHHHHHHHHHHCCEEEEECCCCCCCCCCCCCHHHHHHHHHHHHCCEEEE
TVSGGEPMLHPDLDDIIRHIRRRGILATLITNGYLLTAERIRALNRAGLDYLQISIDNVS
EECCCCCCCCCCHHHHHHHHHHCCHHHHHHHCCEEEEHHHHHHHHHCCCEEEEEEECCCC
PDETSKKSLKVLNRKLELLAEHAEFAVTVNSVLGSPVRNPQDARTIALRARALGLTSTLG
CCCHHHHHHHHHHHHHHHHHHHHHHHEEHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHH
ILHDGSGRLQPLNPEHLNIYRELAQPRQAMFSFAQYDRFQNNISQGLPNRWHCRAGGRFL
HEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEECCCCEEE
YICEDGLVHYCSQQRGRPGIPLDQYTRQDVEREAAVEKPCAPYCTVSCVHQTAMLDAFCE
EEECCHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHC
NPRQVLLEMVAAREQREPGYRPPALVSALSWMFLDGPAKRVLSKVALRLLRARS
CHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: Fe [C]

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11111029 [H]