| Definition | Candidatus Solibacter usitatus Ellin6076 chromosome, complete genome. |
|---|---|
| Accession | NC_008536 |
| Length | 9,965,640 |
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The map label for this gene is 116621329
Identifier: 116621329
GI number: 116621329
Start: 2831985
End: 2832407
Strand: Reverse
Name: 116621329
Synonym: Acid_2210
Alternate gene names: NA
Gene position: 2832407-2831985 (Counterclockwise)
Preceding gene: 116621334
Following gene: 116621326
Centisome position: 28.42
GC content: 60.76
Gene sequence:
>423_bases ATGGCAGCACCTCAGCCTCAAACGTTTACCGCCCCCAACCACTACCACTTGAGCGGCGGCGGAATCAGCATTACGTACTT GCCGACCGGCGCGGGCGGCGTCGCGCACCTGCTCTATCAGGACCCGCACCGAACGCTGAACTTCAGCGGCGATCAGATCC GCACGGTGGAAGTTCCCGACCTCGCGACGGTAGTCAGCGTCACCTTGATGCTGACCGTCGATTCGGGCTCCACCACCTTC AGCGTGTTGATTCCGAGGGCAACCCTGCAGAGTACGATCGGCGCGTCCACTACAATTCACACCGAGGGAATCACCACAGT GCACCGCTTTGCGCTCGTTCCCATGTTCAATCTCGGCCAGAACGAACTCTACACCGTCACGCGCCTACGCGGCAACGCGT CGAACGTGATCATCCCGCTGTAA
Upstream 100 bases:
>100_bases TTACCATCTGGCCCAGCGCGTGCTGCCCGGTACGTTGTAACAAGCCTTCACTGGAACGCTCGCCCACCTCCAAACACCAT GTGCATGAAAAAGGAGATTT
Downstream 100 bases:
>100_bases TACCTGAACGAACCTCGACCGTCAGGGAGCGATCCGGAGCGCCAGTCACGCTCACGCGAGGTGCGGGATCGCTGCCTAGG GTCGAGGCGTGAGTGTTTCC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 140; Mature: 139
Protein sequence:
>140_residues MAAPQPQTFTAPNHYHLSGGGISITYLPTGAGGVAHLLYQDPHRTLNFSGDQIRTVEVPDLATVVSVTLMLTVDSGSTTF SVLIPRATLQSTIGASTTIHTEGITTVHRFALVPMFNLGQNELYTVTRLRGNASNVIIPL
Sequences:
>Translated_140_residues MAAPQPQTFTAPNHYHLSGGGISITYLPTGAGGVAHLLYQDPHRTLNFSGDQIRTVEVPDLATVVSVTLMLTVDSGSTTF SVLIPRATLQSTIGASTTIHTEGITTVHRFALVPMFNLGQNELYTVTRLRGNASNVIIPL >Mature_139_residues AAPQPQTFTAPNHYHLSGGGISITYLPTGAGGVAHLLYQDPHRTLNFSGDQIRTVEVPDLATVVSVTLMLTVDSGSTTFS VLIPRATLQSTIGASTTIHTEGITTVHRFALVPMFNLGQNELYTVTRLRGNASNVIIPL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 14929; Mature: 14798
Theoretical pI: Translated: 7.18; Mature: 7.18
Prosite motif: PS00141 ASP_PROTEASE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 2.1 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 1.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAAPQPQTFTAPNHYHLSGGGISITYLPTGAGGVAHLLYQDPHRTLNFSGDQIRTVEVPD CCCCCCCEEECCCEEEEECCCEEEEEEECCCCCEEEEEEECCCCEECCCCCEEEEEECCC LATVVSVTLMLTVDSGSTTFSVLIPRATLQSTIGASTTIHTEGITTVHRFALVPMFNLGQ HHHEEEEEEEEEECCCCCEEEEEECCHHHHHHCCCCEEEECCCCHHEEHEEEEEEEECCC NELYTVTRLRGNASNVIIPL CCEEEEEEECCCCCEEEEEC >Mature Secondary Structure AAPQPQTFTAPNHYHLSGGGISITYLPTGAGGVAHLLYQDPHRTLNFSGDQIRTVEVPD CCCCCCEEECCCEEEEECCCEEEEEEECCCCCEEEEEEECCCCEECCCCCEEEEEECCC LATVVSVTLMLTVDSGSTTFSVLIPRATLQSTIGASTTIHTEGITTVHRFALVPMFNLGQ HHHEEEEEEEEEECCCCCEEEEEECCHHHHHHCCCCEEEECCCCHHEEHEEEEEEEECCC NELYTVTRLRGNASNVIIPL CCEEEEEEECCCCCEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA