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The map label for this gene is yohM [C]

Identifier: 116621322

GI number: 116621322

Start: 2824209

End: 2824958

Strand: Reverse

Name: yohM [C]

Synonym: Acid_2203

Alternate gene names: 116621322

Gene position: 2824958-2824209 (Counterclockwise)

Preceding gene: 116621326

Following gene: 116621320

Centisome position: 28.35

GC content: 65.2

Gene sequence:

>750_bases
ATGCCAGCTCAGGGCGATTATCTTTCCACACTCTTGCACCAGGGCCAAATCGGCTGGAGCGTCATGCTGCTCGGCATGCT
GGCCGCCTTCGCGTTCGGCGCCGTTCACGCGCTCTCGCCCGGCCACGGCAAAACCCTCGTGGCGGCTTACCTGGTCGGCT
CGCGCGGCACGCCGCGCCACGCAATCTTCCTCGGCCTGATGGTCACTTTCACCCACACCATCAGCGTCTTCGCGCTCGGA
CTGGTAACGCTCTACCTCTCGCGTTTTGTGCTCCCGGAGACCATCACCCCGATCCTCGGCGCCATCTCCGGAATCACCAT
CGTTTGGGTGGGCGCCATGCTCCTCTACCGCCGCACCATAGGCCGGGTTCACGTTCACACCGCCGGTCTGGCCCATCACC
ACGGCGATGGCCGCATCCACACCCACGTGCCGGAGGAGATGAGCATAGGCGGCCTGATCGCGCTCGGCGCCAGCGGCGGA
CTGGTCCCCTGTCCATCCGCCCTCGTCCTGCTCCTGACCTCGGTCTCGCTCGGCCGCGTTGCTTTCGGGCTCACCCTTCT
CGTTGCCTTCAGCCTCGGGCTTGCCGTCGTCCTCAGCGCCATTGGACTCGCCGTCCTCTATGCCCGCCACCTTCTCCCCG
ACAGCAAGAATCTGATGCGTGGCCGCGTTGTCCGCTATCTGCCCATTGCCAGCGCCGCTTTCATTATTTGTGTCGGCCTC
GCGATGACCTGGGTTTCCCTGGGCCCGTAG

Upstream 100 bases:

>100_bases
ACGAGGTCACGATCGTTCCCACCGGAACGCGTAACTCACCGCCCGCCGGCACATCCTGAGCCGTGATCACCTGTCTCATA
TAATGTAAGGAACCATTGTA

Downstream 100 bases:

>100_bases
GATAGGCCTTCCGGACCGTCCCTCTAATCTGCGTCGCCATCTCCCTTAACTTCCACAGCAGCCCCCCGGCCGCCAGCAAT
AGCAGCACCGAAGGCAGCTC

Product: high-affinity nickel-transporter

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 249; Mature: 248

Protein sequence:

>249_residues
MPAQGDYLSTLLHQGQIGWSVMLLGMLAAFAFGAVHALSPGHGKTLVAAYLVGSRGTPRHAIFLGLMVTFTHTISVFALG
LVTLYLSRFVLPETITPILGAISGITIVWVGAMLLYRRTIGRVHVHTAGLAHHHGDGRIHTHVPEEMSIGGLIALGASGG
LVPCPSALVLLLTSVSLGRVAFGLTLLVAFSLGLAVVLSAIGLAVLYARHLLPDSKNLMRGRVVRYLPIASAAFIICVGL
AMTWVSLGP

Sequences:

>Translated_249_residues
MPAQGDYLSTLLHQGQIGWSVMLLGMLAAFAFGAVHALSPGHGKTLVAAYLVGSRGTPRHAIFLGLMVTFTHTISVFALG
LVTLYLSRFVLPETITPILGAISGITIVWVGAMLLYRRTIGRVHVHTAGLAHHHGDGRIHTHVPEEMSIGGLIALGASGG
LVPCPSALVLLLTSVSLGRVAFGLTLLVAFSLGLAVVLSAIGLAVLYARHLLPDSKNLMRGRVVRYLPIASAAFIICVGL
AMTWVSLGP
>Mature_248_residues
PAQGDYLSTLLHQGQIGWSVMLLGMLAAFAFGAVHALSPGHGKTLVAAYLVGSRGTPRHAIFLGLMVTFTHTISVFALGL
VTLYLSRFVLPETITPILGAISGITIVWVGAMLLYRRTIGRVHVHTAGLAHHHGDGRIHTHVPEEMSIGGLIALGASGGL
VPCPSALVLLLTSVSLGRVAFGLTLLVAFSLGLAVVLSAIGLAVLYARHLLPDSKNLMRGRVVRYLPIASAAFIICVGLA
MTWVSLGP

Specific function: Efflux system for nickel and cobalt (Potential) [H]

COG id: COG2215

COG function: function code R; ABC-type uncharacterized transport system, permease component

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the NiCoT transporter (TC 2.A.52) family [H]

Homologues:

Organism=Escherichia coli, GI1788423, Length=228, Percent_Identity=26.7543859649123, Blast_Score=87, Evalue=1e-18,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011541 [H]

Pfam domain/function: PF03824 NicO [H]

EC number: NA

Molecular weight: Translated: 26120; Mature: 25988

Theoretical pI: Translated: 10.49; Mature: 10.49

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPAQGDYLSTLLHQGQIGWSVMLLGMLAAFAFGAVHALSPGHGKTLVAAYLVGSRGTPRH
CCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCCCCHH
AIFLGLMVTFTHTISVFALGLVTLYLSRFVLPETITPILGAISGITIVWVGAMLLYRRTI
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
GRVHVHTAGLAHHHGDGRIHTHVPEEMSIGGLIALGASGGLVPCPSALVLLLTSVSLGRV
CCEEEEECHHHEECCCCEEEECCCCCCCCCCEEEECCCCCCCCCHHHHHHHHHHHHHHHH
AFGLTLLVAFSLGLAVVLSAIGLAVLYARHLLPDSKNLMRGRVVRYLPIASAAFIICVGL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
AMTWVSLGP
HHHHHHCCC
>Mature Secondary Structure 
PAQGDYLSTLLHQGQIGWSVMLLGMLAAFAFGAVHALSPGHGKTLVAAYLVGSRGTPRH
CCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCCCCHH
AIFLGLMVTFTHTISVFALGLVTLYLSRFVLPETITPILGAISGITIVWVGAMLLYRRTI
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
GRVHVHTAGLAHHHGDGRIHTHVPEEMSIGGLIALGASGGLVPCPSALVLLLTSVSLGRV
CCEEEEECHHHEECCCCEEEECCCCCCCCCCEEEECCCCCCCCCHHHHHHHHHHHHHHHH
AFGLTLLVAFSLGLAVVLSAIGLAVLYARHLLPDSKNLMRGRVVRYLPIASAAFIICVGL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
AMTWVSLGP
HHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]