Click here to switch to the map view.

The map label for this gene is 116621320

Identifier: 116621320

GI number: 116621320

Start: 2821630

End: 2822247

Strand: Reverse

Name: 116621320

Synonym: Acid_2201

Alternate gene names: NA

Gene position: 2822247-2821630 (Counterclockwise)

Preceding gene: 116621322

Following gene: 116621319

Centisome position: 28.32

GC content: 57.61

Gene sequence:

>618_bases
TTGTCACGGGAGCCGCCCTCATGTCATCCTCCAGTCGTGCGCCTGGTCTGCCTCTTTGCGATCTGTGTCTGCGCGGCCGG
CGGCCAAACTCCTCCGATCCCCGACGCGCCCATCACCACATTTGGCGTAACCGTGGTCGATTCCGTCGGCCTGCAAGGGA
ATATCTATTTGCTGCGCCCCAATACAGATGCCCTGCCCAAATTTGAAAGACTCAAGCCGGTGGGTGCCATCTATACCAGT
TCCTTGAACATCCCTCCGCGCTCCTTCCTCGAAGGCTTTCCCGGCGTCACGGATCGCTATGAATGGTTCGCTATCGATTA
CCACGGCACTTTTTGGATCGAACAGCCCGGCAAGTACCGTTTCCTGCTCGCTTCCGACGACGGCTCCAAACTCTACATCG
ATAACAAAGTCGTCATCGACAACGACGGTATCCATGCTGTCCAAACCGAAACCGGCATGATCAACCTCAAGGCCGGCAGC
CACCGCATCCGCGTTTCGTATTTCCAGGGGCCGCGCGCCGGAGTGGCGCTCGTTCTCGGTGTAGCCGCTCCTGGCGAGTT
GCGTTGGCGCATCTTCAACACGAAAGAGTTCCTTCCCCCGCACAATCCAGAAAATTAA

Upstream 100 bases:

>100_bases
ACAGCAAATCGCAAGAGCCGCCAGAGCGAGAAACAGCTGCAGAAAAAGCACTGAATCAGTGTAACAACCGGCCCGTAAGA
CAGGCCTCCCGGCCGGGCTC

Downstream 100 bases:

>100_bases
TTTCCCCGGGTTGTCGATCTCGTGAACGCGCCGTTCGACTTACTGTCAGAGGAGAATAACAACATGCGATTCATGATTCT
GATTAAAGCCACCAAGGATT

Product: PA14 domain-containing protein

Products: NA

Alternate protein names: PA14 Domain-Containing Protein; No Similarity; Glycosyl Hydrolase Family

Number of amino acids: Translated: 205; Mature: 204

Protein sequence:

>205_residues
MSREPPSCHPPVVRLVCLFAICVCAAGGQTPPIPDAPITTFGVTVVDSVGLQGNIYLLRPNTDALPKFERLKPVGAIYTS
SLNIPPRSFLEGFPGVTDRYEWFAIDYHGTFWIEQPGKYRFLLASDDGSKLYIDNKVVIDNDGIHAVQTETGMINLKAGS
HRIRVSYFQGPRAGVALVLGVAAPGELRWRIFNTKEFLPPHNPEN

Sequences:

>Translated_205_residues
MSREPPSCHPPVVRLVCLFAICVCAAGGQTPPIPDAPITTFGVTVVDSVGLQGNIYLLRPNTDALPKFERLKPVGAIYTS
SLNIPPRSFLEGFPGVTDRYEWFAIDYHGTFWIEQPGKYRFLLASDDGSKLYIDNKVVIDNDGIHAVQTETGMINLKAGS
HRIRVSYFQGPRAGVALVLGVAAPGELRWRIFNTKEFLPPHNPEN
>Mature_204_residues
SREPPSCHPPVVRLVCLFAICVCAAGGQTPPIPDAPITTFGVTVVDSVGLQGNIYLLRPNTDALPKFERLKPVGAIYTSS
LNIPPRSFLEGFPGVTDRYEWFAIDYHGTFWIEQPGKYRFLLASDDGSKLYIDNKVVIDNDGIHAVQTETGMINLKAGSH
RIRVSYFQGPRAGVALVLGVAAPGELRWRIFNTKEFLPPHNPEN

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 22591; Mature: 22460

Theoretical pI: Translated: 7.50; Mature: 7.50

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.0 %Cys     (Translated Protein)
1.0 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
2.0 %Cys     (Mature Protein)
0.5 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSREPPSCHPPVVRLVCLFAICVCAAGGQTPPIPDAPITTFGVTVVDSVGLQGNIYLLRP
CCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEEEEEECCCCCCCEEEECC
NTDALPKFERLKPVGAIYTSSLNIPPRSFLEGFPGVTDRYEWFAIDYHGTFWIEQPGKYR
CCCCCCCHHHCCCCCEEEEECCCCCHHHHHHCCCCCCCCEEEEEEEECCEEEEECCCCEE
FLLASDDGSKLYIDNKVVIDNDGIHAVQTETGMINLKAGSHRIRVSYFQGPRAGVALVLG
EEEECCCCCEEEECCEEEEECCCEEEEEECCCEEEEECCCEEEEEEEECCCCCCEEEEEE
VAAPGELRWRIFNTKEFLPPHNPEN
ECCCCCEEEEEECCHHCCCCCCCCC
>Mature Secondary Structure 
SREPPSCHPPVVRLVCLFAICVCAAGGQTPPIPDAPITTFGVTVVDSVGLQGNIYLLRP
CCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEEEEEECCCCCCCEEEECC
NTDALPKFERLKPVGAIYTSSLNIPPRSFLEGFPGVTDRYEWFAIDYHGTFWIEQPGKYR
CCCCCCCHHHCCCCCEEEEECCCCCHHHHHHCCCCCCCCEEEEEEEECCEEEEECCCCEE
FLLASDDGSKLYIDNKVVIDNDGIHAVQTETGMINLKAGSHRIRVSYFQGPRAGVALVLG
EEEECCCCCEEEECCEEEEECCCEEEEEECCCEEEEECCCEEEEEEEECCCCCCEEEEEE
VAAPGELRWRIFNTKEFLPPHNPEN
ECCCCCEEEEEECCHHCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA