| Definition | Candidatus Solibacter usitatus Ellin6076 chromosome, complete genome. |
|---|---|
| Accession | NC_008536 |
| Length | 9,965,640 |
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The map label for this gene is 116620857
Identifier: 116620857
GI number: 116620857
Start: 2158439
End: 2160238
Strand: Reverse
Name: 116620857
Synonym: Acid_1738
Alternate gene names: NA
Gene position: 2160238-2158439 (Counterclockwise)
Preceding gene: 116620860
Following gene: 116620854
Centisome position: 21.68
GC content: 62.11
Gene sequence:
>1800_bases ATGCCGGAATCGATACTTGGAAAATTGACCGAATACCTGGGCCAAAACTGGCCCTGGTACAAACAGCCCCTGCCGCTCGC GCTGGCCAGCCTGATCGAAATTCGCGACGAATTGCGCGCGAAGAACCTCCATGACACCGAGGAGCCTCCGTTTGCGCAGA ACGCGGGCGCGCTGCCCGCGGGCGTGAAGGAAGCGCGCACCGCCGACGGCACCTATAACGATCTGAAGTATCCGGCGATG GGCAGCCGCGGCTGCCGCTTCGGACGCAATTTTCCGCTCGATGCCGTGCATCCCGATACCGCCAATCTCATGTCACCGAA TCCTCGCGAAGTGAGTTCGCGGCTGCTGGCGCGGCGCGAGTTTCAACCCGCGGGCTTTCTCAACCTGCTCACCGCCACCT GGATTCAGTTCATGGTCCACGATTGGTTCGTGCACCGCCAATCGACGGAGAAGCACGAGATTCCGATCGGCCCCGACGAT GCCTGGCCCGACAAACCGATGACGGTCACCAAGAGCGCGATCTCGCCGGCGCCGGCCGGCTCGACGCATCCACCTGCCTT CATCAACGACAACACGCACTGGTGGGACGCCTCGCAGTTGTACGGCTCCGACGCCGCTACAGCGGTCAAGGTGCGCAGCG GAGTAGATGGCAAACTCAAGATCGGGGCCGATGGAAAGATGCTGGTGGACCCGGCTACCGGGGAGGACCTGACCGGCTTC GAGGATAACGGCTGGGTCGGCCTGAGCATGCTCCACGGCCTCTTCGTCGCCGAGCACAACTCCATCTGCGACATGCTCAA GGCGCACAATCCCGATTGGAACGACGATCGCCTTCACGCCAAGGCGCGGCTGATCAACGTTGCGCTGATCGCCAAGATTC ATACGGCGGAGTGGACCCCCGCGATTCTGCCCAACCCGATCACACAGAAGGCCATGCACACCAACTGGTACGGCCTGGCC GGCGACGAGTTGCAGGATGTCTTCAAGTTCCTGAACGAAAGCGAAGTGATGGGCGGCATTCCTGGCTCGGAGACGAATCA TCACAGCGCCCCGTATTCGCTCACGGAAGAGTTCGTCTCGGTGTACCGCATGCACGCGCTGATCCCCGATGAGTTCGTGA TCCGTTCGACCGAGAACGACGCAACCGTGGCGCGTTATCAGTTGCCCGAGATCTTCGGCAAGCGCGGCCGGGCTGAGATG GCGAAGCTATCGCTCGCCGATCTGTTTTATTCCTTCGGCACGACACACCCGGGCGCGGTGCGGCTGCACAATTTTCCGAA TGCCCTGCGCGATCTGCACAAGGATGACGGCACGCATCTTGACCTGGCATCGATCGACATTCTGCGCGACCGCGAGCGCG GCGTACCGCGGTACAACCAGTTCCGCCGCCTGCTGCGCAAGGATCCGGTACAGTCTTTCGAGGAACTGACCGGCGGCGAC GAGGCGCTGGCTCAGGAACTTCGCGAGGTGTACGGCAACGATTTGGAGAAGGTAGACCTGATGGTGGGACTCTACGCCGA ACCGCTGCCCGAAGGCTTCGGCTTCAGCGAGACGGCCTTCCGCATTTTCGTGCTGATGGCATCGCGGCGTTTGAAGAGCG ACCGGTTCTTCACCAATGACTACACGGACGCGATGTATACGGCCGAGGGCATGGAGTGGATCCGCGCCAATGGGATGTTC TCCGTGATCGCGCGGCACATGCCGCAAGTGGCCGCGGCCTTCGAGGGCGTGGAAAACCCGTTCGCACCTTGGAAGACCGC GGGTGGGGTGGTGGCAAAGGCGACAGCGGCTTCGAGCTAG
Upstream 100 bases:
>100_bases ATCACCTTCGGCTCCATCCCTCGACTTTACATCGGCGGGTGCTCGATCGCACACACCGGCTATTGCGAGTGTGGGGGCTC TTTGGATAGAGTCGGTGAAC
Downstream 100 bases:
>100_bases GGTCAACACACTAACGCGCCCGTGAGGGAGCGCCACCCACCGTGAAGGTCCGGGTAGCGCTCCCTCACGGTCGCGGCTCG TTGGCGCAGAACTATTCGTT
Product: heme peroxidase
Products: NA
Alternate protein names: Peroxidase Family Protein; Heme Peroxidase; Animal Haem Peroxidase Superfamily; Oxygenase; Animal Haem Peroxidase Family; Peroxinectin; Animal Haem Peroxidase; Haem Peroxidase; Animal Heme Peroxidase; Animal Heme Peroxidase Superfamily Protein
Number of amino acids: Translated: 599; Mature: 598
Protein sequence:
>599_residues MPESILGKLTEYLGQNWPWYKQPLPLALASLIEIRDELRAKNLHDTEEPPFAQNAGALPAGVKEARTADGTYNDLKYPAM GSRGCRFGRNFPLDAVHPDTANLMSPNPREVSSRLLARREFQPAGFLNLLTATWIQFMVHDWFVHRQSTEKHEIPIGPDD AWPDKPMTVTKSAISPAPAGSTHPPAFINDNTHWWDASQLYGSDAATAVKVRSGVDGKLKIGADGKMLVDPATGEDLTGF EDNGWVGLSMLHGLFVAEHNSICDMLKAHNPDWNDDRLHAKARLINVALIAKIHTAEWTPAILPNPITQKAMHTNWYGLA GDELQDVFKFLNESEVMGGIPGSETNHHSAPYSLTEEFVSVYRMHALIPDEFVIRSTENDATVARYQLPEIFGKRGRAEM AKLSLADLFYSFGTTHPGAVRLHNFPNALRDLHKDDGTHLDLASIDILRDRERGVPRYNQFRRLLRKDPVQSFEELTGGD EALAQELREVYGNDLEKVDLMVGLYAEPLPEGFGFSETAFRIFVLMASRRLKSDRFFTNDYTDAMYTAEGMEWIRANGMF SVIARHMPQVAAAFEGVENPFAPWKTAGGVVAKATAASS
Sequences:
>Translated_599_residues MPESILGKLTEYLGQNWPWYKQPLPLALASLIEIRDELRAKNLHDTEEPPFAQNAGALPAGVKEARTADGTYNDLKYPAM GSRGCRFGRNFPLDAVHPDTANLMSPNPREVSSRLLARREFQPAGFLNLLTATWIQFMVHDWFVHRQSTEKHEIPIGPDD AWPDKPMTVTKSAISPAPAGSTHPPAFINDNTHWWDASQLYGSDAATAVKVRSGVDGKLKIGADGKMLVDPATGEDLTGF EDNGWVGLSMLHGLFVAEHNSICDMLKAHNPDWNDDRLHAKARLINVALIAKIHTAEWTPAILPNPITQKAMHTNWYGLA GDELQDVFKFLNESEVMGGIPGSETNHHSAPYSLTEEFVSVYRMHALIPDEFVIRSTENDATVARYQLPEIFGKRGRAEM AKLSLADLFYSFGTTHPGAVRLHNFPNALRDLHKDDGTHLDLASIDILRDRERGVPRYNQFRRLLRKDPVQSFEELTGGD EALAQELREVYGNDLEKVDLMVGLYAEPLPEGFGFSETAFRIFVLMASRRLKSDRFFTNDYTDAMYTAEGMEWIRANGMF SVIARHMPQVAAAFEGVENPFAPWKTAGGVVAKATAASS >Mature_598_residues PESILGKLTEYLGQNWPWYKQPLPLALASLIEIRDELRAKNLHDTEEPPFAQNAGALPAGVKEARTADGTYNDLKYPAMG SRGCRFGRNFPLDAVHPDTANLMSPNPREVSSRLLARREFQPAGFLNLLTATWIQFMVHDWFVHRQSTEKHEIPIGPDDA WPDKPMTVTKSAISPAPAGSTHPPAFINDNTHWWDASQLYGSDAATAVKVRSGVDGKLKIGADGKMLVDPATGEDLTGFE DNGWVGLSMLHGLFVAEHNSICDMLKAHNPDWNDDRLHAKARLINVALIAKIHTAEWTPAILPNPITQKAMHTNWYGLAG DELQDVFKFLNESEVMGGIPGSETNHHSAPYSLTEEFVSVYRMHALIPDEFVIRSTENDATVARYQLPEIFGKRGRAEMA KLSLADLFYSFGTTHPGAVRLHNFPNALRDLHKDDGTHLDLASIDILRDRERGVPRYNQFRRLLRKDPVQSFEELTGGDE ALAQELREVYGNDLEKVDLMVGLYAEPLPEGFGFSETAFRIFVLMASRRLKSDRFFTNDYTDAMYTAEGMEWIRANGMFS VIARHMPQVAAAFEGVENPFAPWKTAGGVVAKATAASS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Homo sapiens, GI4506265, Length=440, Percent_Identity=25.2272727272727, Blast_Score=92, Evalue=1e-18, Organism=Caenorhabditis elegans, GI17537877, Length=541, Percent_Identity=26.0628465804067, Blast_Score=108, Evalue=8e-24, Organism=Caenorhabditis elegans, GI17562988, Length=488, Percent_Identity=26.0245901639344, Blast_Score=83, Evalue=5e-16, Organism=Caenorhabditis elegans, GI17533605, Length=272, Percent_Identity=28.3088235294118, Blast_Score=82, Evalue=6e-16, Organism=Caenorhabditis elegans, GI17533607, Length=272, Percent_Identity=28.3088235294118, Blast_Score=82, Evalue=7e-16, Organism=Drosophila melanogaster, GI45552897, Length=340, Percent_Identity=26.1764705882353, Blast_Score=78, Evalue=2e-14, Organism=Drosophila melanogaster, GI45552899, Length=340, Percent_Identity=26.1764705882353, Blast_Score=78, Evalue=2e-14, Organism=Drosophila melanogaster, GI45552901, Length=340, Percent_Identity=26.1764705882353, Blast_Score=78, Evalue=2e-14, Organism=Drosophila melanogaster, GI24656151, Length=340, Percent_Identity=26.1764705882353, Blast_Score=78, Evalue=2e-14,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 66739; Mature: 66608
Theoretical pI: Translated: 5.78; Mature: 5.78
Prosite motif: PS50292 PEROXIDASE_3
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPESILGKLTEYLGQNWPWYKQPLPLALASLIEIRDELRAKNLHDTEEPPFAQNAGALPA CCHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCC GVKEARTADGTYNDLKYPAMGSRGCRFGRNFPLDAVHPDTANLMSPNPREVSSRLLARRE CHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHC FQPAGFLNLLTATWIQFMVHDWFVHRQSTEKHEIPIGPDDAWPDKPMTVTKSAISPAPAG CCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCEEEHHHCCCCCCC STHPPAFINDNTHWWDASQLYGSDAATAVKVRSGVDGKLKIGADGKMLVDPATGEDLTGF CCCCCCEECCCCCEECHHHHHCCCCCEEEEEECCCCCEEEECCCCCEEECCCCCCCCCCC EDNGWVGLSMLHGLFVAEHNSICDMLKAHNPDWNDDRLHAKARLINVALIAKIHTAEWTP CCCCEEHHHHHHHHHHHCCHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHEEECCCCCCC AILPNPITQKAMHTNWYGLAGDELQDVFKFLNESEVMGGIPGSETNHHSAPYSLTEEFVS CCCCCCHHHHHHCCCCCCCCCHHHHHHHHHHCHHHHHCCCCCCCCCCCCCCHHHHHHHHH VYRMHALIPDEFVIRSTENDATVARYQLPEIFGKRGRAEMAKLSLADLFYSFGTTHPGAV HHHHHHCCCCHHEEECCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCCEE RLHNFPNALRDLHKDDGTHLDLASIDILRDRERGVPRYNQFRRLLRKDPVQSFEELTGGD EECCCHHHHHHHHCCCCCEEEHHHHHHHHHHHCCCCHHHHHHHHHHHCHHHHHHHHCCCH EALAQELREVYGNDLEKVDLMVGLYAEPLPEGFGFSETAFRIFVLMASRRLKSDRFFTND HHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCC YTDAMYTAEGMEWIRANGMFSVIARHMPQVAAAFEGVENPFAPWKTAGGVVAKATAASS CCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEECCCCCC >Mature Secondary Structure PESILGKLTEYLGQNWPWYKQPLPLALASLIEIRDELRAKNLHDTEEPPFAQNAGALPA CHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCC GVKEARTADGTYNDLKYPAMGSRGCRFGRNFPLDAVHPDTANLMSPNPREVSSRLLARRE CHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHC FQPAGFLNLLTATWIQFMVHDWFVHRQSTEKHEIPIGPDDAWPDKPMTVTKSAISPAPAG CCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCEEEHHHCCCCCCC STHPPAFINDNTHWWDASQLYGSDAATAVKVRSGVDGKLKIGADGKMLVDPATGEDLTGF CCCCCCEECCCCCEECHHHHHCCCCCEEEEEECCCCCEEEECCCCCEEECCCCCCCCCCC EDNGWVGLSMLHGLFVAEHNSICDMLKAHNPDWNDDRLHAKARLINVALIAKIHTAEWTP CCCCEEHHHHHHHHHHHCCHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHEEECCCCCCC AILPNPITQKAMHTNWYGLAGDELQDVFKFLNESEVMGGIPGSETNHHSAPYSLTEEFVS CCCCCCHHHHHHCCCCCCCCCHHHHHHHHHHCHHHHHCCCCCCCCCCCCCCHHHHHHHHH VYRMHALIPDEFVIRSTENDATVARYQLPEIFGKRGRAEMAKLSLADLFYSFGTTHPGAV HHHHHHCCCCHHEEECCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCCEE RLHNFPNALRDLHKDDGTHLDLASIDILRDRERGVPRYNQFRRLLRKDPVQSFEELTGGD EECCCHHHHHHHHCCCCCEEEHHHHHHHHHHHCCCCHHHHHHHHHHHCHHHHHHHHCCCH EALAQELREVYGNDLEKVDLMVGLYAEPLPEGFGFSETAFRIFVLMASRRLKSDRFFTND HHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCC YTDAMYTAEGMEWIRANGMFSVIARHMPQVAAAFEGVENPFAPWKTAGGVVAKATAASS CCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEECCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA