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The map label for this gene is 116620860

Identifier: 116620860

GI number: 116620860

Start: 2162595

End: 2163701

Strand: Reverse

Name: 116620860

Synonym: Acid_1741

Alternate gene names: NA

Gene position: 2163701-2162595 (Counterclockwise)

Preceding gene: 116620864

Following gene: 116620857

Centisome position: 21.71

GC content: 63.6

Gene sequence:

>1107_bases
ATGCGACCCGTCTTCGCTTTGTTTGCGCTCTCCAGCGCCATCGCCGCCGTACACCCGGTTGTGCCCGGCGATTCGCGCCG
CGGCGCCAAGGTCTTCGAAAGCCAGCAGTGTATCCGTTGTCACTCCGTCAACGGGCGCGGCGGTAAGATGGGCCTCGATC
TCGGTCGCTCGGTCAGCCGAAGCTACACCCCCGCGCGCCTCGCCAGCACCATGTGGAATCACGCTCCTACCATGTGGGGG
GCCATCGACGCCGGCGGCATCAAGATGCCCCGCCTCGCCCCAAAAGACGCCGCGGACCTCTTCGCCTACTTCTACTCCAC
CCGCTTCTTTGATTCCCCCGGCGACGTCGCGCGCGGCAAAACCACGTTTAGTTCCGCACACTGCAGCCAGTGCCACGGCA
TCAACGACTCCCGGGCCGAAGGCGCTATCCCGGTCGCCAAATGGGAATCGCTCGGCGACCCCATCCTGCTCGTACAGCAG
ATGTGGAACCACAGCTACCGCATGAAAATGGCCTTCGCCCGCCAGAAGCTGGAGTGGCAGCAGCTCACCAGCGAACAGCT
CAACGACATCCTCACTTACCTCCGCACCTTGCCCGAAACGCAGCACCTCGTCTCGCGCTTCGCGAATGCCTCCGGCGACG
CCGGCCATCGGATCTTCGAACAGAAAGGCTGCGTCAACTGTCACGTCGGCAAACTCGCGCTCGAGAACCGCCTCCACAAC
ATGACCCTCACCGATATCGCCGTCGATATGTGGAATCACGCGCCTCGCATGGCGCAGCAAGTCCCCACCCTCACGCCGGA
CGAAATGCGCCAGCTCCTCAGCTTCCTGTGGATGCGCCAGTTCGTCGCCGCCGAAGGCGATCTCGCCGAAGGCAAACGCG
TCTTCGTCGCCCGCCGCTGCAACGAATGCCATTACGGAGGCACCAATGGCGCTCCGCAGCTCCCCGGCCAGGCGCGCCGC
TACTCCGAAGTCTCCGTGATCTCCGCTATCTGGGGCCACGGTCCGCAAATGCTCAACCGGATGAAACAGGCCGGCATCCC
CTGGCCGCAATTCGCCAATCCCCAGGAACTCGTCAACCTGATCGCCTACCTCAACTCGATCCAGTAA

Upstream 100 bases:

>100_bases
AGCCAATTCAACACGGTGCGCCTGGTCACCCGAAGCATCCCGCTCCATTATAGTTCCCGGTCGCGGGCAAGCTCCCCTCT
GCTTCCGGTAGACTTTTTCT

Downstream 100 bases:

>100_bases
GACAGGCTCTTACGTCACCGGCCCCGGATTGAACGGCGCGAGCGCGTTGCCAAGCCCCCACTTCTCCGCCCACGTCTTCC
GCCGCCCGCTCGCGACCTCC

Product: class I cytochrome c

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 368; Mature: 368

Protein sequence:

>368_residues
MRPVFALFALSSAIAAVHPVVPGDSRRGAKVFESQQCIRCHSVNGRGGKMGLDLGRSVSRSYTPARLASTMWNHAPTMWG
AIDAGGIKMPRLAPKDAADLFAYFYSTRFFDSPGDVARGKTTFSSAHCSQCHGINDSRAEGAIPVAKWESLGDPILLVQQ
MWNHSYRMKMAFARQKLEWQQLTSEQLNDILTYLRTLPETQHLVSRFANASGDAGHRIFEQKGCVNCHVGKLALENRLHN
MTLTDIAVDMWNHAPRMAQQVPTLTPDEMRQLLSFLWMRQFVAAEGDLAEGKRVFVARRCNECHYGGTNGAPQLPGQARR
YSEVSVISAIWGHGPQMLNRMKQAGIPWPQFANPQELVNLIAYLNSIQ

Sequences:

>Translated_368_residues
MRPVFALFALSSAIAAVHPVVPGDSRRGAKVFESQQCIRCHSVNGRGGKMGLDLGRSVSRSYTPARLASTMWNHAPTMWG
AIDAGGIKMPRLAPKDAADLFAYFYSTRFFDSPGDVARGKTTFSSAHCSQCHGINDSRAEGAIPVAKWESLGDPILLVQQ
MWNHSYRMKMAFARQKLEWQQLTSEQLNDILTYLRTLPETQHLVSRFANASGDAGHRIFEQKGCVNCHVGKLALENRLHN
MTLTDIAVDMWNHAPRMAQQVPTLTPDEMRQLLSFLWMRQFVAAEGDLAEGKRVFVARRCNECHYGGTNGAPQLPGQARR
YSEVSVISAIWGHGPQMLNRMKQAGIPWPQFANPQELVNLIAYLNSIQ
>Mature_368_residues
MRPVFALFALSSAIAAVHPVVPGDSRRGAKVFESQQCIRCHSVNGRGGKMGLDLGRSVSRSYTPARLASTMWNHAPTMWG
AIDAGGIKMPRLAPKDAADLFAYFYSTRFFDSPGDVARGKTTFSSAHCSQCHGINDSRAEGAIPVAKWESLGDPILLVQQ
MWNHSYRMKMAFARQKLEWQQLTSEQLNDILTYLRTLPETQHLVSRFANASGDAGHRIFEQKGCVNCHVGKLALENRLHN
MTLTDIAVDMWNHAPRMAQQVPTLTPDEMRQLLSFLWMRQFVAAEGDLAEGKRVFVARRCNECHYGGTNGAPQLPGQARR
YSEVSVISAIWGHGPQMLNRMKQAGIPWPQFANPQELVNLIAYLNSIQ

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 41009; Mature: 41009

Theoretical pI: Translated: 9.44; Mature: 9.44

Prosite motif: PS51007 CYTC

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.2 %Cys     (Translated Protein)
4.1 %Met     (Translated Protein)
6.2 %Cys+Met (Translated Protein)
2.2 %Cys     (Mature Protein)
4.1 %Met     (Mature Protein)
6.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure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HHHHHCCC
>Mature Secondary Structure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HHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA