| Definition | Candidatus Solibacter usitatus Ellin6076 chromosome, complete genome. |
|---|---|
| Accession | NC_008536 |
| Length | 9,965,640 |
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The map label for this gene is gutB [H]
Identifier: 116620387
GI number: 116620387
Start: 1563261
End: 1564301
Strand: Direct
Name: gutB [H]
Synonym: Acid_1264
Alternate gene names: 116620387
Gene position: 1563261-1564301 (Clockwise)
Preceding gene: 116620386
Following gene: 116620388
Centisome position: 15.69
GC content: 60.33
Gene sequence:
>1041_bases GTGAATAACCACATGATGGCTGCTGTGCTTTACGGCAAGGAGCATTTGCAGGTAGAGCCGGTAGCCGTTCCCAAGATTGA CATCGGTGACATTCTCGTACGGGTAAAGGTGGCGTTGACCTGCGGCACGGACGTAAAAGTCTTCCGCCGGGGCTACCATG CCCGCATGATCGTACCCCCCGCGGTGTTCGGGCACGAGTTGGCCGGCGATGTCGTCGCCGTGGGTGAGGATGTCCGGAAC TTCAGCGTGGGTCAGCGTGTAGTGGCGGCGAACTCCGCTCCATGCGGCGAGTGCTTCTTCTGCAAGCGGGAACTGGAAAA CCTTTGCGAAGATCTGCTGTTCAACAACGGCGCGTACGCCGAATATATTCGGATTCCTGCCCGCATCGTCCAACGGAATA CTTATCTGATCCCCGATGATGTGGGATATCAGGACGCTGCGCTGGTGGAACCGCTGGCATGCGTAGTGCGCGGATTTGAA GAATCGGCGCCGCGCGCCGGCGATACCGTGGCGATTGTGGGACTGGGGCCGATCGGGCTGATGTTCGTGAAACTGGCGAA GCTGTACGGCTGCCGCGTGATCGCGGTCGGACGGCGGCAAACGCAGTTGGACCGCGCAGAGGCGTTGGGCGCGGATCATT TGATTGTCGCGGGCGAGCATAGCGATCCCGTGAAATCGAGCCGCGAGATGACGCACGGGCGCGGCGTGGATGTGGCGATC GAAGCAGTCGGCAAGCCGCAGACCTGGCAATGGGCCGTCAACATGGTGCGGCGCGGAGGCACGGTCAATTTCTTCGGAGG CTGCCCCAACGAAAGCAAGGTGAATCTGGATACCGCGCTCCTCCACTACTCCGAAATCACCTGCAAGGCGAGCTTCCATC ACACTCCGGCTTACATTCAGAAAGCGCTGGATCTGGTCTGCGCCGGGCACATCACGGCCTCGGTATTCGTCAACAAGGAA GAGCCGTTGGCCAATCTCCTCGAAGTGATGCGGCACCTGATGAGCCACAACGGCCACCTGAAGACGGCGATCGTTCCGTA G
Upstream 100 bases:
>100_bases ATCGTCTGCCATTAGTTAAAATCCGTTCAGGATTTGATTTAGCATTGCATCCAGGACCTAAATCGTTGAAAATAATCGTT CAGCCACAGAGGTGGTCATA
Downstream 100 bases:
>100_bases AATGTCCGGCGTGGGCTCACCCGCGTTTCTGCCGCCGGCGAATTTCGTCAGGTCGCCGGAACTGCTCAATAAGCAATGGT CGGCCGAGGAAGGACGCGCT
Product: alcohol dehydrogenase
Products: NA
Alternate protein names: Glucitol dehydrogenase; L-iditol 2-dehydrogenase [H]
Number of amino acids: Translated: 346; Mature: 346
Protein sequence:
>346_residues MNNHMMAAVLYGKEHLQVEPVAVPKIDIGDILVRVKVALTCGTDVKVFRRGYHARMIVPPAVFGHELAGDVVAVGEDVRN FSVGQRVVAANSAPCGECFFCKRELENLCEDLLFNNGAYAEYIRIPARIVQRNTYLIPDDVGYQDAALVEPLACVVRGFE ESAPRAGDTVAIVGLGPIGLMFVKLAKLYGCRVIAVGRRQTQLDRAEALGADHLIVAGEHSDPVKSSREMTHGRGVDVAI EAVGKPQTWQWAVNMVRRGGTVNFFGGCPNESKVNLDTALLHYSEITCKASFHHTPAYIQKALDLVCAGHITASVFVNKE EPLANLLEVMRHLMSHNGHLKTAIVP
Sequences:
>Translated_346_residues MNNHMMAAVLYGKEHLQVEPVAVPKIDIGDILVRVKVALTCGTDVKVFRRGYHARMIVPPAVFGHELAGDVVAVGEDVRN FSVGQRVVAANSAPCGECFFCKRELENLCEDLLFNNGAYAEYIRIPARIVQRNTYLIPDDVGYQDAALVEPLACVVRGFE ESAPRAGDTVAIVGLGPIGLMFVKLAKLYGCRVIAVGRRQTQLDRAEALGADHLIVAGEHSDPVKSSREMTHGRGVDVAI EAVGKPQTWQWAVNMVRRGGTVNFFGGCPNESKVNLDTALLHYSEITCKASFHHTPAYIQKALDLVCAGHITASVFVNKE EPLANLLEVMRHLMSHNGHLKTAIVP >Mature_346_residues MNNHMMAAVLYGKEHLQVEPVAVPKIDIGDILVRVKVALTCGTDVKVFRRGYHARMIVPPAVFGHELAGDVVAVGEDVRN FSVGQRVVAANSAPCGECFFCKRELENLCEDLLFNNGAYAEYIRIPARIVQRNTYLIPDDVGYQDAALVEPLACVVRGFE ESAPRAGDTVAIVGLGPIGLMFVKLAKLYGCRVIAVGRRQTQLDRAEALGADHLIVAGEHSDPVKSSREMTHGRGVDVAI EAVGKPQTWQWAVNMVRRGGTVNFFGGCPNESKVNLDTALLHYSEITCKASFHHTPAYIQKALDLVCAGHITASVFVNKE EPLANLLEVMRHLMSHNGHLKTAIVP
Specific function: Reduces glucitol to fructose [H]
COG id: COG1063
COG function: function code ER; Threonine dehydrogenase and related Zn-dependent dehydrogenases
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the zinc-containing alcohol dehydrogenase family [H]
Homologues:
Organism=Homo sapiens, GI156627571, Length=334, Percent_Identity=26.0479041916168, Blast_Score=107, Evalue=2e-23, Organism=Homo sapiens, GI4501933, Length=303, Percent_Identity=27.3927392739274, Blast_Score=78, Evalue=1e-14, Organism=Homo sapiens, GI34577061, Length=303, Percent_Identity=27.3927392739274, Blast_Score=75, Evalue=9e-14, Organism=Homo sapiens, GI4501939, Length=237, Percent_Identity=27.8481012658228, Blast_Score=69, Evalue=6e-12, Organism=Homo sapiens, GI156523966, Length=237, Percent_Identity=27.8481012658228, Blast_Score=69, Evalue=8e-12, Organism=Escherichia coli, GI1788073, Length=291, Percent_Identity=31.9587628865979, Blast_Score=126, Evalue=2e-30, Organism=Escherichia coli, GI1790045, Length=311, Percent_Identity=28.9389067524116, Blast_Score=125, Evalue=4e-30, Organism=Escherichia coli, GI226510992, Length=324, Percent_Identity=28.3950617283951, Blast_Score=111, Evalue=7e-26, Organism=Escherichia coli, GI1788075, Length=276, Percent_Identity=30.0724637681159, Blast_Score=106, Evalue=2e-24, Organism=Escherichia coli, GI87082125, Length=297, Percent_Identity=29.6296296296296, Blast_Score=106, Evalue=3e-24, Organism=Escherichia coli, GI1787863, Length=217, Percent_Identity=32.258064516129, Blast_Score=105, Evalue=4e-24, Organism=Escherichia coli, GI1786825, Length=275, Percent_Identity=31.6363636363636, Blast_Score=105, Evalue=5e-24, Organism=Escherichia coli, GI1788407, Length=250, Percent_Identity=29.6, Blast_Score=92, Evalue=4e-20, Organism=Escherichia coli, GI1790718, Length=349, Percent_Identity=25.7879656160458, Blast_Score=87, Evalue=2e-18, Organism=Escherichia coli, GI1786518, Length=271, Percent_Identity=26.9372693726937, Blast_Score=67, Evalue=2e-12, Organism=Escherichia coli, GI87081918, Length=337, Percent_Identity=26.7062314540059, Blast_Score=61, Evalue=9e-11, Organism=Caenorhabditis elegans, GI17562876, Length=340, Percent_Identity=27.9411764705882, Blast_Score=126, Evalue=2e-29, Organism=Caenorhabditis elegans, GI17562878, Length=347, Percent_Identity=28.5302593659942, Blast_Score=120, Evalue=1e-27, Organism=Caenorhabditis elegans, GI17562584, Length=328, Percent_Identity=27.7439024390244, Blast_Score=96, Evalue=2e-20, Organism=Caenorhabditis elegans, GI17562582, Length=328, Percent_Identity=28.6585365853659, Blast_Score=89, Evalue=5e-18, Organism=Caenorhabditis elegans, GI71988145, Length=340, Percent_Identity=25.2941176470588, Blast_Score=86, Evalue=3e-17, Organism=Saccharomyces cerevisiae, GI6323099, Length=350, Percent_Identity=25.7142857142857, Blast_Score=115, Evalue=1e-26, Organism=Saccharomyces cerevisiae, GI6322619, Length=357, Percent_Identity=25.4901960784314, Blast_Score=101, Evalue=2e-22, Organism=Saccharomyces cerevisiae, GI6319955, Length=357, Percent_Identity=25.4901960784314, Blast_Score=101, Evalue=2e-22, Organism=Saccharomyces cerevisiae, GI6323729, Length=336, Percent_Identity=26.7857142857143, Blast_Score=78, Evalue=2e-15, Organism=Saccharomyces cerevisiae, GI6319257, Length=301, Percent_Identity=27.2425249169435, Blast_Score=77, Evalue=4e-15, Organism=Saccharomyces cerevisiae, GI6319520, Length=263, Percent_Identity=25.4752851711027, Blast_Score=73, Evalue=7e-14, Organism=Saccharomyces cerevisiae, GI6323961, Length=329, Percent_Identity=26.7477203647416, Blast_Score=71, Evalue=3e-13, Organism=Saccharomyces cerevisiae, GI6324486, Length=339, Percent_Identity=25.9587020648968, Blast_Score=70, Evalue=6e-13, Organism=Saccharomyces cerevisiae, GI6319258, Length=270, Percent_Identity=24.0740740740741, Blast_Score=68, Evalue=2e-12, Organism=Drosophila melanogaster, GI17137530, Length=360, Percent_Identity=28.0555555555556, Blast_Score=109, Evalue=3e-24, Organism=Drosophila melanogaster, GI17737897, Length=327, Percent_Identity=29.3577981651376, Blast_Score=108, Evalue=5e-24, Organism=Drosophila melanogaster, GI45550770, Length=183, Percent_Identity=26.2295081967213, Blast_Score=67, Evalue=2e-11, Organism=Drosophila melanogaster, GI45551930, Length=183, Percent_Identity=26.2295081967213, Blast_Score=67, Evalue=2e-11, Organism=Drosophila melanogaster, GI221457811, Length=183, Percent_Identity=26.2295081967213, Blast_Score=67, Evalue=2e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR013149 - InterPro: IPR013154 - InterPro: IPR002085 - InterPro: IPR002328 - InterPro: IPR011032 - InterPro: IPR016040 [H]
Pfam domain/function: PF08240 ADH_N; PF00107 ADH_zinc_N [H]
EC number: =1.1.1.14 [H]
Molecular weight: Translated: 37729; Mature: 37729
Theoretical pI: Translated: 7.17; Mature: 7.17
Prosite motif: PS00059 ADH_ZINC
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.9 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 5.5 %Cys+Met (Translated Protein) 2.9 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 5.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNNHMMAAVLYGKEHLQVEPVAVPKIDIGDILVRVKVALTCGTDVKVFRRGYHARMIVPP CCCCEEEEEEECCCCCEECCEECCCCCHHHHEEEEEEEEEECCCHHHHHCCCCEEEEECC AVFGHELAGDVVAVGEDVRNFSVGQRVVAANSAPCGECFFCKRELENLCEDLLFNNGAYA HHHHHHHCCCEEEECCHHHHHHHCCEEEECCCCCCCHHHHHHHHHHHHHHHHHHCCCCHH EYIRIPARIVQRNTYLIPDDVGYQDAALVEPLACVVRGFEESAPRAGDTVAIVGLGPIGL HHHHHHHHHHCCCCEECCCCCCCCCHHHHHHHHHHHHCHHHCCCCCCCEEEEEECCHHHH MFVKLAKLYGCRVIAVGRRQTQLDRAEALGADHLIVAGEHSDPVKSSREMTHGRGVDVAI HHHHHHHHHCCEEEEECCCHHHHHHHHHCCCCEEEEECCCCCCCHHHHHHHCCCCCEEEE EAVGKPQTWQWAVNMVRRGGTVNFFGGCPNESKVNLDTALLHYSEITCKASFHHTPAYIQ EECCCCCHHHHHHHHHHCCCCEEEECCCCCCCCCCHHHHHEEHHHEEEEECCCCCHHHHH KALDLVCAGHITASVFVNKEEPLANLLEVMRHLMSHNGHLKTAIVP HHHHHHHHCCEEEEEEECCCCCHHHHHHHHHHHHCCCCCEEEEECC >Mature Secondary Structure MNNHMMAAVLYGKEHLQVEPVAVPKIDIGDILVRVKVALTCGTDVKVFRRGYHARMIVPP CCCCEEEEEEECCCCCEECCEECCCCCHHHHEEEEEEEEEECCCHHHHHCCCCEEEEECC AVFGHELAGDVVAVGEDVRNFSVGQRVVAANSAPCGECFFCKRELENLCEDLLFNNGAYA HHHHHHHCCCEEEECCHHHHHHHCCEEEECCCCCCCHHHHHHHHHHHHHHHHHHCCCCHH EYIRIPARIVQRNTYLIPDDVGYQDAALVEPLACVVRGFEESAPRAGDTVAIVGLGPIGL HHHHHHHHHHCCCCEECCCCCCCCCHHHHHHHHHHHHCHHHCCCCCCCEEEEEECCHHHH MFVKLAKLYGCRVIAVGRRQTQLDRAEALGADHLIVAGEHSDPVKSSREMTHGRGVDVAI HHHHHHHHHCCEEEEECCCHHHHHHHHHCCCCEEEEECCCCCCCHHHHHHHCCCCCEEEE EAVGKPQTWQWAVNMVRRGGTVNFFGGCPNESKVNLDTALLHYSEITCKASFHHTPAYIQ EECCCCCHHHHHHHHHHCCCCEEEECCCCCCCCCCHHHHHEEHHHEEEEECCCCCHHHHH KALDLVCAGHITASVFVNKEEPLANLLEVMRHLMSHNGHLKTAIVP HHHHHHHHCCEEEEEEECCCCCHHHHHHHHHHHHCCCCCEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 1460002; 9384377; 8195086 [H]