| Definition | Candidatus Solibacter usitatus Ellin6076 chromosome, complete genome. |
|---|---|
| Accession | NC_008536 |
| Length | 9,965,640 |
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The map label for this gene is 116620197
Identifier: 116620197
GI number: 116620197
Start: 1323057
End: 1323947
Strand: Reverse
Name: 116620197
Synonym: Acid_1070
Alternate gene names: NA
Gene position: 1323947-1323057 (Counterclockwise)
Preceding gene: 116620198
Following gene: 116620194
Centisome position: 13.29
GC content: 64.76
Gene sequence:
>891_bases ATGGGGCGCAGCATCGGAGTGCTGGCCACGCGTTATCTTTGGGCCGGAATCGTCGAAGGCGAGCAGTTGGGAGACGTCAA AGTCTTTCCCGATCCGGCACAGCCGCAGGTTGACCTGAAGACGGTGCCCGCCGGCGAAATCATCCAGATTCTGCGCGGCC AGATTCGCGTACTGGCGGCGGGCAGACCGGTCGAATCGGTGGGCGCCGGATTCCCCGGCGTGATCCGCGGCGGTGTCATC CAGGAATCGCCGAATCTGGGACAACTGAAAGGGCTGCGTATCGCCGAGGAATTGCGAGCCGCGCTGCTCTGCGACGGCAT GGATGTACCCGTCACGGCGATTAACGACGCGGACGCGTTGGCCGCCGGAATCGCGGCCACCCATCACTACCTGGACAGCA TCGTGCGCGTCTGGTACCTCGGCGATGGCATCGGCTTTGGCCGCCATCCGCACAACGACGGGGTTTGGGAGGCAGGCCAC ATGGTCGTCTCGCTCGATCCCAGGGAGCGCTTTTGCGGCTGCGGCGGTATTGGCCACCTCGAAGGCATTATGGGGCACCG GGCCATGCGCCTCCGCTTCCTCGATATGGAGCCGGAGGAGATCTTCGCCGCCGCGCGCCACGGGGACAACCGCGCCTCCG ATTTCTGCAAACTCTGGCATCGCGCCCTCGCGGCCGGTGCTGCAACCAGCATTCACCTCGACGGTCCGGGCCGCTTTTAT ATCGCCGGCCCGAATGCCGATTTCGTCGATCTTCATTTGCTCGCCGCCTACCTCCAGGACATGGTCAAGATGAGCCCGCT TCAGGGCAGCTTCTTTGAACTCGTGCGCAACAGCCACGACCTGGCGCTGATCGGCGCCGCTACCGCCAGCCGCGCCCGGC AGCTACTCTAG
Upstream 100 bases:
>100_bases TCGTGGAAACGGTATTCAACTATCCCACGCTGGCGGAATGTTATAAGCAAGCCGCATTCAATGGCATCAACAAGCTGATG CGGTTTTAGGAGGGGGCTCC
Downstream 100 bases:
>100_bases AAATCCCCGTCCATAGGGAAGGGATCTTTCTCGACGCCCAGTGCGACCATGTCCCGCGAAGTTGTAGGATCATGACGCGC TACGGCCGCCGCCATCTTCG
Product: ROK family protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 296; Mature: 295
Protein sequence:
>296_residues MGRSIGVLATRYLWAGIVEGEQLGDVKVFPDPAQPQVDLKTVPAGEIIQILRGQIRVLAAGRPVESVGAGFPGVIRGGVI QESPNLGQLKGLRIAEELRAALLCDGMDVPVTAINDADALAAGIAATHHYLDSIVRVWYLGDGIGFGRHPHNDGVWEAGH MVVSLDPRERFCGCGGIGHLEGIMGHRAMRLRFLDMEPEEIFAAARHGDNRASDFCKLWHRALAAGAATSIHLDGPGRFY IAGPNADFVDLHLLAAYLQDMVKMSPLQGSFFELVRNSHDLALIGAATASRARQLL
Sequences:
>Translated_296_residues MGRSIGVLATRYLWAGIVEGEQLGDVKVFPDPAQPQVDLKTVPAGEIIQILRGQIRVLAAGRPVESVGAGFPGVIRGGVI QESPNLGQLKGLRIAEELRAALLCDGMDVPVTAINDADALAAGIAATHHYLDSIVRVWYLGDGIGFGRHPHNDGVWEAGH MVVSLDPRERFCGCGGIGHLEGIMGHRAMRLRFLDMEPEEIFAAARHGDNRASDFCKLWHRALAAGAATSIHLDGPGRFY IAGPNADFVDLHLLAAYLQDMVKMSPLQGSFFELVRNSHDLALIGAATASRARQLL >Mature_295_residues GRSIGVLATRYLWAGIVEGEQLGDVKVFPDPAQPQVDLKTVPAGEIIQILRGQIRVLAAGRPVESVGAGFPGVIRGGVIQ ESPNLGQLKGLRIAEELRAALLCDGMDVPVTAINDADALAAGIAATHHYLDSIVRVWYLGDGIGFGRHPHNDGVWEAGHM VVSLDPRERFCGCGGIGHLEGIMGHRAMRLRFLDMEPEEIFAAARHGDNRASDFCKLWHRALAAGAATSIHLDGPGRFYI AGPNADFVDLHLLAAYLQDMVKMSPLQGSFFELVRNSHDLALIGAATASRARQLL
Specific function: Unknown
COG id: COG1940
COG function: function code KG; Transcriptional regulator/sugar kinase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 31804; Mature: 31673
Theoretical pI: Translated: 6.51; Mature: 6.51
Prosite motif: PS00589 PTS_HPR_SER
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 4.1 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGRSIGVLATRYLWAGIVEGEQLGDVKVFPDPAQPQVDLKTVPAGEIIQILRGQIRVLAA CCCCHHHHHHHHHHHHHCCCCCCCCEEECCCCCCCCCEEEECCHHHHHHHHHCCEEEEEC GRPVESVGAGFPGVIRGGVIQESPNLGQLKGLRIAEELRAALLCDGMDVPVTAINDADAL CCCHHHHCCCCCHHHCCCEEECCCCCCCHHCHHHHHHHHHHHHCCCCCCCEEEECCHHHH AAGIAATHHYLDSIVRVWYLGDGIGFGRHPHNDGVWEAGHMVVSLDPRERFCGCGGIGHL HHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEECCCEEEEECHHHHHCCCCCCHHH EGIMGHRAMRLRFLDMEPEEIFAAARHGDNRASDFCKLWHRALAAGAATSIHLDGPGRFY HHHHHCCEEEEEEECCCHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCEEEEECCCCEEE IAGPNADFVDLHLLAAYLQDMVKMSPLQGSFFELVRNSHDLALIGAATASRARQLL EECCCCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHCCCCEEEEECHHHHHHHHCC >Mature Secondary Structure GRSIGVLATRYLWAGIVEGEQLGDVKVFPDPAQPQVDLKTVPAGEIIQILRGQIRVLAA CCCHHHHHHHHHHHHHCCCCCCCCEEECCCCCCCCCEEEECCHHHHHHHHHCCEEEEEC GRPVESVGAGFPGVIRGGVIQESPNLGQLKGLRIAEELRAALLCDGMDVPVTAINDADAL CCCHHHHCCCCCHHHCCCEEECCCCCCCHHCHHHHHHHHHHHHCCCCCCCEEEECCHHHH AAGIAATHHYLDSIVRVWYLGDGIGFGRHPHNDGVWEAGHMVVSLDPRERFCGCGGIGHL HHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEECCCEEEEECHHHHHCCCCCCHHH EGIMGHRAMRLRFLDMEPEEIFAAARHGDNRASDFCKLWHRALAAGAATSIHLDGPGRFY HHHHHCCEEEEEEECCCHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCEEEEECCCCEEE IAGPNADFVDLHLLAAYLQDMVKMSPLQGSFFELVRNSHDLALIGAATASRARQLL EECCCCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHCCCCEEEEECHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA