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The map label for this gene is 116619973

Identifier: 116619973

GI number: 116619973

Start: 1047738

End: 1048448

Strand: Direct

Name: 116619973

Synonym: Acid_0845

Alternate gene names: NA

Gene position: 1047738-1048448 (Clockwise)

Preceding gene: 116619972

Following gene: 116619976

Centisome position: 10.51

GC content: 64.7

Gene sequence:

>711_bases
ATGCAGCAAACCACACAGCCCGCACCCGCACCACAGGCCGTACTACAGGTCGCGAAGCCGGCGCCGCCCGTGCCTCCCGC
CGAATTTCAGGAGCGCGGTATCGCGACGATGGATGCCGCCGCTCTGATCCACATCCTCACCGACGCAAGTTCACCAGTCT
TCGAAAAGGCCAAGGCCTGTCAGCGGATTGGCGAGTTGGGCGCAAAGGAGGCAGTGCCCGCCGTGTCGGCCCTGCTCGGC
GATGAGCATTTGAGCACATACGCCCGGTACGCTCTCGAGCCGATTGTCGATTCCTCCGCAGGGGACGCGCTCCGTGCAGC
TTTGACCAGGCTGAAGGGCAATCTCCTCGTCGGCGTCATCAACTCGATCGGCAAGCGCAGGGACGGAAAGGCAGGCCCTG
TACTCGCCAGGATGATCTACGATGCGGACGCCAACGTCGCCCGAGCGGCCGCCGCGGCCTTGGGGAGTATTGGGGGAACC
CCGGCGGTCAAGGACTTGCAAACCGCTCTCGCCAAGACAAGCGGGTTGACGAGAATGGCCGTCGCCGACGCCTCCCTGGT
TTGCGCGGAGCGTTTCCTCGCCGAGGGCAAACGCGATCAGGCTTTGACGCTCTACGCCTCGCTGAGCGCACCGGAAATAC
CTGCTTCCGTGCGCCTGGCGGCAATGCACGGGATCATACGCGAGGAAACCTCGACCACCCGTCCGCGGTAG

Upstream 100 bases:

>100_bases
GATCCGGCGAAGCGCGAGTTCACCAATGACGATGTTGCCAACCGCATGCGATCGCGCGCCTTGCGCGAACCGTGGCGGGT
TTGAGCGAAGGAGACGCACC

Downstream 100 bases:

>100_bases
CGGAACGGCCCCTAAAGCATCGCCAGCGGAACGTCGCGCGTGGGGGCGGGGAATGCGCGATCGATGGCGGCAATCTCCTC
GGGCGTGAGCGACCAACCTA

Product: HEAT repeat-containing PBS lyase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 236; Mature: 236

Protein sequence:

>236_residues
MQQTTQPAPAPQAVLQVAKPAPPVPPAEFQERGIATMDAAALIHILTDASSPVFEKAKACQRIGELGAKEAVPAVSALLG
DEHLSTYARYALEPIVDSSAGDALRAALTRLKGNLLVGVINSIGKRRDGKAGPVLARMIYDADANVARAAAAALGSIGGT
PAVKDLQTALAKTSGLTRMAVADASLVCAERFLAEGKRDQALTLYASLSAPEIPASVRLAAMHGIIREETSTTRPR

Sequences:

>Translated_236_residues
MQQTTQPAPAPQAVLQVAKPAPPVPPAEFQERGIATMDAAALIHILTDASSPVFEKAKACQRIGELGAKEAVPAVSALLG
DEHLSTYARYALEPIVDSSAGDALRAALTRLKGNLLVGVINSIGKRRDGKAGPVLARMIYDADANVARAAAAALGSIGGT
PAVKDLQTALAKTSGLTRMAVADASLVCAERFLAEGKRDQALTLYASLSAPEIPASVRLAAMHGIIREETSTTRPR
>Mature_236_residues
MQQTTQPAPAPQAVLQVAKPAPPVPPAEFQERGIATMDAAALIHILTDASSPVFEKAKACQRIGELGAKEAVPAVSALLG
DEHLSTYARYALEPIVDSSAGDALRAALTRLKGNLLVGVINSIGKRRDGKAGPVLARMIYDADANVARAAAAALGSIGGT
PAVKDLQTALAKTSGLTRMAVADASLVCAERFLAEGKRDQALTLYASLSAPEIPASVRLAAMHGIIREETSTTRPR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 24480; Mature: 24480

Theoretical pI: Translated: 9.13; Mature: 9.13

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQQTTQPAPAPQAVLQVAKPAPPVPPAEFQERGIATMDAAALIHILTDASSPVFEKAKAC
CCCCCCCCCCHHHHHHHHCCCCCCCCHHHHHCCCHHHHHHHHHHHHHCCCCHHHHHHHHH
QRIGELGAKEAVPAVSALLGDEHLSTYARYALEPIVDSSAGDALRAALTRLKGNLLVGVI
HHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCHHHHHH
NSIGKRRDGKAGPVLARMIYDADANVARAAAAALGSIGGTPAVKDLQTALAKTSGLTRMA
HHHCCCCCCCCCHHHHHHHHCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCHHHH
VADASLVCAERFLAEGKRDQALTLYASLSAPEIPASVRLAAMHGIIREETSTTRPR
HHHHHHHHHHHHHHCCCCCCEEEEEEECCCCCCCHHHHHHHHHHHHHHCCCCCCCC
>Mature Secondary Structure
MQQTTQPAPAPQAVLQVAKPAPPVPPAEFQERGIATMDAAALIHILTDASSPVFEKAKAC
CCCCCCCCCCHHHHHHHHCCCCCCCCHHHHHCCCHHHHHHHHHHHHHCCCCHHHHHHHHH
QRIGELGAKEAVPAVSALLGDEHLSTYARYALEPIVDSSAGDALRAALTRLKGNLLVGVI
HHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCHHHHHH
NSIGKRRDGKAGPVLARMIYDADANVARAAAAALGSIGGTPAVKDLQTALAKTSGLTRMA
HHHCCCCCCCCCHHHHHHHHCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCHHHH
VADASLVCAERFLAEGKRDQALTLYASLSAPEIPASVRLAAMHGIIREETSTTRPR
HHHHHHHHHHHHHHCCCCCCEEEEEEECCCCCCCHHHHHHHHHHHHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA