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The map label for this gene is amaB [H]

Identifier: 116619502

GI number: 116619502

Start: 460811

End: 461995

Strand: Direct

Name: amaB [H]

Synonym: Acid_0361

Alternate gene names: 116619502

Gene position: 460811-461995 (Clockwise)

Preceding gene: 116619501

Following gene: 116619503

Centisome position: 4.62

GC content: 66.24

Gene sequence:

>1185_bases
ATGCCAGCGCGCCGTGTCATCGATCGCTGCCTGCAACTCGCGCAATTCACCGAGGAACCCGGCTACATCACCCGCACCTA
TCTCTCGCCGCCGATGCACGGCGTTCATGACTGCCTCACGCGATGGCTGCGCGAGGCCGGCTGCGAAGTTGCCATCGACG
CCGCCGGCAACCTGCGCGGCGTTTACCCCGCGGCCATGGCGAATGCTCCGCGAATCGTGATCGGCTCGCACCTCGATACC
GTTCCGCATGGCGGCGCCTTCGATGGCATTTTGGGAGTGGTGCTCGGCGTCGCGCTGGTGGAGTCGCTCGGCGGCCGGCG
TTTGGGAACGGAGATCGAGGTCATCGGCTTTTCCGAGGAGGAGGGCGTCCGCTATGGCACGTGCTTCATCGGCAGCCGCG
CCGTAGTTGGCAACATCGACGATGGTTTGATGCAGCGCATTCGTCCGGCCATTCTGGAATTCGGACTCGACCCCGCCGGC
ATGGCTGCGGCGGCCTGGCAGCACAAGATCTCGGCCTACCTGGAATTCCATATCGAGCAGGGTCCTGTCCTGGAGAGCCT
CGAGCTTTCGGTGGGAGTCGTGGAGGCGATCGCCGGACAAACCCGCGCGGTGGTGGAATTCCAAGGCAAGGCCAATCATG
CCGGAACCACTCCCATGCTGCTGCGCCGCGACGCCGTCGCGACCGCCGCCGAGTGGATTTCGTTCGTGGAACAGATGGGG
CGCAATACGCCAGGCCTGGTCGCCACTATCGGCGGGCTTACGGCGGAGCCCTCCGTCTCGAACGTGATCGCGGGCCGCGT
TACCGCCACCCTCGATGTTCGCCATGCGGCCGATGCGGTGCGCCGGGAGTGCACGCGAGTGGCCTTCACCGCCGCTTTCG
ATATCGCCGCCCGCCGCGGCTTGCAATGCGCCACGCGCATGATCCAGGACCATGCCGCCGCGCCGATGGACGCCGAGCTC
ACCACGTTGGTGGAAAGCTCCGTGCGCGCGGCCGGCCAATCGGTGTATCGCATGATCAGCGGCGCGGGCCATGACGCCAT
GATCATCGCCCAGCGCCACCCGGCCGCCATGCTCTTCGTGCGCAGCCCCGGCGGTATCAGTCACCACCCGGACGAGTGCG
TGCGCGAACAGGATGTGGCCGCCGCCCTCGCGGTCGGAAAGAAAATATTGGAGCACTGGAGTTGA

Upstream 100 bases:

>100_bases
ATGAAATCGTGGTCCGCTTCGGCATCGCCGATTCAACCGCCAACTACCACGTTCCCCTGCTCGTTTCCCCATACGGCTAC
AGTACGTACAAAGGAACCTA

Downstream 100 bases:

>100_bases
GGATGCTCTGGCGTATTCGTAGCGTTTGGTCCGCCTCGATCCGATCGGCCTCCATCCGAGCCGCGACCGTCAGGGAGCGG
TCGCTAATTTGCCGTTTAGA

Product: allantoate amidohydrolase

Products: NA

Alternate protein names: L-carbamoylase [H]

Number of amino acids: Translated: 394; Mature: 393

Protein sequence:

>394_residues
MPARRVIDRCLQLAQFTEEPGYITRTYLSPPMHGVHDCLTRWLREAGCEVAIDAAGNLRGVYPAAMANAPRIVIGSHLDT
VPHGGAFDGILGVVLGVALVESLGGRRLGTEIEVIGFSEEEGVRYGTCFIGSRAVVGNIDDGLMQRIRPAILEFGLDPAG
MAAAAWQHKISAYLEFHIEQGPVLESLELSVGVVEAIAGQTRAVVEFQGKANHAGTTPMLLRRDAVATAAEWISFVEQMG
RNTPGLVATIGGLTAEPSVSNVIAGRVTATLDVRHAADAVRRECTRVAFTAAFDIAARRGLQCATRMIQDHAAAPMDAEL
TTLVESSVRAAGQSVYRMISGAGHDAMIIAQRHPAAMLFVRSPGGISHHPDECVREQDVAAALAVGKKILEHWS

Sequences:

>Translated_394_residues
MPARRVIDRCLQLAQFTEEPGYITRTYLSPPMHGVHDCLTRWLREAGCEVAIDAAGNLRGVYPAAMANAPRIVIGSHLDT
VPHGGAFDGILGVVLGVALVESLGGRRLGTEIEVIGFSEEEGVRYGTCFIGSRAVVGNIDDGLMQRIRPAILEFGLDPAG
MAAAAWQHKISAYLEFHIEQGPVLESLELSVGVVEAIAGQTRAVVEFQGKANHAGTTPMLLRRDAVATAAEWISFVEQMG
RNTPGLVATIGGLTAEPSVSNVIAGRVTATLDVRHAADAVRRECTRVAFTAAFDIAARRGLQCATRMIQDHAAAPMDAEL
TTLVESSVRAAGQSVYRMISGAGHDAMIIAQRHPAAMLFVRSPGGISHHPDECVREQDVAAALAVGKKILEHWS
>Mature_393_residues
PARRVIDRCLQLAQFTEEPGYITRTYLSPPMHGVHDCLTRWLREAGCEVAIDAAGNLRGVYPAAMANAPRIVIGSHLDTV
PHGGAFDGILGVVLGVALVESLGGRRLGTEIEVIGFSEEEGVRYGTCFIGSRAVVGNIDDGLMQRIRPAILEFGLDPAGM
AAAAWQHKISAYLEFHIEQGPVLESLELSVGVVEAIAGQTRAVVEFQGKANHAGTTPMLLRRDAVATAAEWISFVEQMGR
NTPGLVATIGGLTAEPSVSNVIAGRVTATLDVRHAADAVRRECTRVAFTAAFDIAARRGLQCATRMIQDHAAAPMDAELT
TLVESSVRAAGQSVYRMISGAGHDAMIIAQRHPAAMLFVRSPGGISHHPDECVREQDVAAALAVGKKILEHWS

Specific function: Involved In The Anaerobic Utilization Of Allantoin. Converts Allantoate To (S)-Ureidoglycolate And Ammonia. [C]

COG id: COG0624

COG function: function code E; Acetylornithine deacetylase/Succinyl-diaminopimelate desuccinylase and related deacylases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the peptidase M20 family [H]

Homologues:

Organism=Escherichia coli, GI1786726, Length=393, Percent_Identity=35.6234096692112, Blast_Score=183, Evalue=2e-47,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010158
- InterPro:   IPR002933
- InterPro:   IPR011650 [H]

Pfam domain/function: PF07687 M20_dimer; PF01546 Peptidase_M20 [H]

EC number: =3.5.1.87 [H]

Molecular weight: Translated: 42007; Mature: 41875

Theoretical pI: Translated: 6.39; Mature: 6.39

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.8 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
4.8 %Cys+Met (Translated Protein)
1.8 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
4.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPARRVIDRCLQLAQFTEEPGYITRTYLSPPMHGVHDCLTRWLREAGCEVAIDAAGNLRG
CCHHHHHHHHHHHHHHCCCCCCEEEEECCCCCHHHHHHHHHHHHHCCCEEEEECCCCCCC
VYPAAMANAPRIVIGSHLDTVPHGGAFDGILGVVLGVALVESLGGRRLGTEIEVIGFSEE
CCHHHHCCCCEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCC
EGVRYGTCFIGSRAVVGNIDDGLMQRIRPAILEFGLDPAGMAAAAWQHKISAYLEFHIEQ
CCCEEEEEEECCCEEECCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHEECCC
GPVLESLELSVGVVEAIAGQTRAVVEFQGKANHAGTTPMLLRRDAVATAAEWISFVEQMG
CCCHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHC
RNTPGLVATIGGLTAEPSVSNVIAGRVTATLDVRHAADAVRRECTRVAFTAAFDIAARRG
CCCCCCEEEECCCCCCCCHHHHHHCCEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHCC
LQCATRMIQDHAAAPMDAELTTLVESSVRAAGQSVYRMISGAGHDAMIIAQRHPAAMLFV
HHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCEEEEEE
RSPGGISHHPDECVREQDVAAALAVGKKILEHWS
ECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
PARRVIDRCLQLAQFTEEPGYITRTYLSPPMHGVHDCLTRWLREAGCEVAIDAAGNLRG
CHHHHHHHHHHHHHHCCCCCCEEEEECCCCCHHHHHHHHHHHHHCCCEEEEECCCCCCC
VYPAAMANAPRIVIGSHLDTVPHGGAFDGILGVVLGVALVESLGGRRLGTEIEVIGFSEE
CCHHHHCCCCEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCC
EGVRYGTCFIGSRAVVGNIDDGLMQRIRPAILEFGLDPAGMAAAAWQHKISAYLEFHIEQ
CCCEEEEEEECCCEEECCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHEECCC
GPVLESLELSVGVVEAIAGQTRAVVEFQGKANHAGTTPMLLRRDAVATAAEWISFVEQMG
CCCHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHC
RNTPGLVATIGGLTAEPSVSNVIAGRVTATLDVRHAADAVRRECTRVAFTAAFDIAARRG
CCCCCCEEEECCCCCCCCHHHHHHCCEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHCC
LQCATRMIQDHAAAPMDAELTTLVESSVRAAGQSVYRMISGAGHDAMIIAQRHPAAMLFV
HHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCEEEEEE
RSPGGISHHPDECVREQDVAAALAVGKKILEHWS
ECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9023955; 8285691 [H]