| Definition | Streptococcus pneumoniae D39, complete genome. |
|---|---|
| Accession | NC_008533 |
| Length | 2,046,115 |
Click here to switch to the map view.
The map label for this gene is 116516973
Identifier: 116516973
GI number: 116516973
Start: 216514
End: 216708
Strand: Reverse
Name: 116516973
Synonym: SPD_0227
Alternate gene names: NA
Gene position: 216708-216514 (Counterclockwise)
Preceding gene: 116516144
Following gene: 116515816
Centisome position: 10.59
GC content: 37.44
Gene sequence:
>195_bases ATGAACATCGAAGGATATAGCGACCTTCTCAAACCTGAACTAAAAGGAAAAATCGCAACTGCTGACCCAGCAAACTCTTC TAGCGCCTTTGCTCAATTAACAAATATGCTACAAGCTCAAGGTGGTTACAAAGATGATAAGGCTTGGTCTTATGTAAAAG ATCTTTTCACACTTATTGATGGTATAGTAAAATGA
Upstream 100 bases:
>100_bases TGATAATGTTATCAAAGAATATCAAAACACAACTGGCTTCTCTACTCCTTATACACTAGATGGTAGTGTTTTAATCGTCC ACCCTGATTTAACTAAAGGC
Downstream 100 bases:
>100_bases AATAAGAACAGGACAAATTAATCAGGACAGTCAAATCGATTTCTAACAATGTTTTAGAAGTAGAGGTGTACTATTCTAGT TTCAATATACTATAAAATCG
Product: iron(III) ABC transporter iron-binding protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 64; Mature: 64
Protein sequence:
>64_residues MNIEGYSDLLKPELKGKIATADPANSSSAFAQLTNMLQAQGGYKDDKAWSYVKDLFTLIDGIVK
Sequences:
>Translated_64_residues MNIEGYSDLLKPELKGKIATADPANSSSAFAQLTNMLQAQGGYKDDKAWSYVKDLFTLIDGIVK >Mature_64_residues MNIEGYSDLLKPELKGKIATADPANSSSAFAQLTNMLQAQGGYKDDKAWSYVKDLFTLIDGIVK
Specific function: Unknown
COG id: COG1840
COG function: function code P; ABC-type Fe3+ transport system, periplasmic component
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 6982; Mature: 6982
Theoretical pI: Translated: 4.83; Mature: 4.83
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.1 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNIEGYSDLLKPELKGKIATADPANSSSAFAQLTNMLQAQGGYKDDKAWSYVKDLFTLID CCCCCHHHHHCHHHCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHH GIVK HHCC >Mature Secondary Structure MNIEGYSDLLKPELKGKIATADPANSSSAFAQLTNMLQAQGGYKDDKAWSYVKDLFTLID CCCCCHHHHHCHHHCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHH GIVK HHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA