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The map label for this gene is potD [C]

Identifier: 116515816

GI number: 116515816

Start: 216001

End: 216369

Strand: Reverse

Name: potD [C]

Synonym: SPD_0226

Alternate gene names: 116515816

Gene position: 216369-216001 (Counterclockwise)

Preceding gene: 116516973

Following gene: 116516814

Centisome position: 10.57

GC content: 33.06

Gene sequence:

>369_bases
ATGACTGTTGGTCTCTCTTATGAAGATTCAGCAGTTAAACTCTTAAATGACGGAGCTAACATTAAAGTAGTCTATCCAAA
AGAAGGAACCGTCTTCCTACCTGCTAGTGCTGCTATCGTTAAAAAATCTAAAAATATGGAAAATGCCAAGAAATTTATCG
ATTTTATTATCTCTCAAGAAGTACAAGATACACTTGGTACAACCACTACTAACCGTCCTGTTCGTAAAAATGCTAAAACA
AGCGAAAACATGAAACCAATTGACAAAATCAAAACACTCACTGAAGATTATGATTATGTCATCAAGAATAAATCAGATAT
CGTTAAGAAATACAACGAAGTCTTTACAGATATCCAATCTAAACAGTAA

Upstream 100 bases:

>100_bases
AACAATGTTTTAGAAGTAGAGGTGTACTATTCTAGTTTCAATATACTATAAAATCGGTTTAAGTTCATCTGGTGTCTATA
AAGCAGTCGCTGATGGAGAA

Downstream 100 bases:

>100_bases
AAGAGGTTCACTATGAGTGAGATCGAAATTATTAACGCCAAAAAAATCTACCACGATGTCCCTGTTATTGAGAATTTGAA
CATTACAATTCCAAAAGGAA

Product: iron ABC transporter iron-binding protein

Products: phosphate; putrescine [Cytoplasm]; ADP; spermidine [Cytoplasm] [C]

Alternate protein names: NA

Number of amino acids: Translated: 122; Mature: 121

Protein sequence:

>122_residues
MTVGLSYEDSAVKLLNDGANIKVVYPKEGTVFLPASAAIVKKSKNMENAKKFIDFIISQEVQDTLGTTTTNRPVRKNAKT
SENMKPIDKIKTLTEDYDYVIKNKSDIVKKYNEVFTDIQSKQ

Sequences:

>Translated_122_residues
MTVGLSYEDSAVKLLNDGANIKVVYPKEGTVFLPASAAIVKKSKNMENAKKFIDFIISQEVQDTLGTTTTNRPVRKNAKT
SENMKPIDKIKTLTEDYDYVIKNKSDIVKKYNEVFTDIQSKQ
>Mature_121_residues
TVGLSYEDSAVKLLNDGANIKVVYPKEGTVFLPASAAIVKKSKNMENAKKFIDFIISQEVQDTLGTTTTNRPVRKNAKTS
ENMKPIDKIKTLTEDYDYVIKNKSDIVKKYNEVFTDIQSKQ

Specific function: Required For The Activity Of The Bacterial Periplasmic Transport System Of Putrescine And Spermidine. Polyamine Binding Protein. [C]

COG id: COG1840

COG function: function code P; ABC-type Fe3+ transport system, periplasmic component

Gene ontology:

Cell location: Periplasmic Protein [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: 1040 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 260 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 460 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 380 Molecules/Cell In: Stationary Phase,

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 13739; Mature: 13608

Theoretical pI: Translated: 9.76; Mature: 9.76

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
1.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTVGLSYEDSAVKLLNDGANIKVVYPKEGTVFLPASAAIVKKSKNMENAKKFIDFIISQE
CCCCCCCCCCHHHEECCCCCEEEEECCCCCEEECCHHHHHHHHCCHHHHHHHHHHHHHHH
VQDTLGTTTTNRPVRKNAKTSENMKPIDKIKTLTEDYDYVIKNKSDIVKKYNEVFTDIQS
HHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCC
KQ
CC
>Mature Secondary Structure 
TVGLSYEDSAVKLLNDGANIKVVYPKEGTVFLPASAAIVKKSKNMENAKKFIDFIISQE
CCCCCCCCCHHHEECCCCCEEEEECCCCCEEECCHHHHHHHHCCHHHHHHHHHHHHHHH
VQDTLGTTTTNRPVRKNAKTSENMKPIDKIKTLTEDYDYVIKNKSDIVKKYNEVFTDIQS
HHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCC
KQ
CC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: putrescine [Periplasm]; H2O; ATP; spermidine [Periplasm] [C]

Specific reaction: ATP + putrescine [Periplasm] + H2O = ADP + phosphate + putrescine [Cytoplasm] ATP + spermidine [Periplasm] + H2O = ADP + phosphate + spermidine [Cytoplasm] [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA