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The map label for this gene is 116516144

Identifier: 116516144

GI number: 116516144

Start: 217340

End: 217537

Strand: Reverse

Name: 116516144

Synonym: SPD_0228

Alternate gene names: NA

Gene position: 217537-217340 (Counterclockwise)

Preceding gene: 116517186

Following gene: 116516973

Centisome position: 10.63

GC content: 33.33

Gene sequence:

>198_bases
ATGACTCTAAATGAATATATCTTACAATATCGCCTGAAACAAGCTATAGATAAGATGGCTGAATCTCCCAACTCCCCTTT
AAGCGCTATCTCTGACCAAGTTGGATTTTCAGACTATAAATATTTTGCCAAAGTATTTAAAAAGTATCTCCATATTTCCC
CAAAGAAATTGAAATCACTCGGAAGAATAGTAAAATAG

Upstream 100 bases:

>100_bases
ACCACCATATTAATTGTTATTTCTAGTTTATTTCCTTGAAATGCTCTAGCTATTTGCAGATAACAAGCATCTATATAAGG
TTATCAAAGAAGACTTCCCC

Downstream 100 bases:

>100_bases
GCTATTCTTCTTTTTGTAGAGAATTTTACTCTAATATAGTGAATTGAAATAAGATGTGAACATCTCTATCAGGAAAGTCA
AATTAATTTATAGAAATATT

Product: transcriptional regulator, AraC family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 65; Mature: 64

Protein sequence:

>65_residues
MTLNEYILQYRLKQAIDKMAESPNSPLSAISDQVGFSDYKYFAKVFKKYLHISPKKLKSLGRIVK

Sequences:

>Translated_65_residues
MTLNEYILQYRLKQAIDKMAESPNSPLSAISDQVGFSDYKYFAKVFKKYLHISPKKLKSLGRIVK
>Mature_64_residues
TLNEYILQYRLKQAIDKMAESPNSPLSAISDQVGFSDYKYFAKVFKKYLHISPKKLKSLGRIVK

Specific function: Unknown

COG id: COG4753

COG function: function code T; Response regulator containing CheY-like receiver domain and AraC-type DNA-binding domain

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 7541; Mature: 7410

Theoretical pI: Translated: 10.38; Mature: 10.38

Prosite motif: PS01124 HTH_ARAC_FAMILY_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
1.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTLNEYILQYRLKQAIDKMAESPNSPLSAISDQVGFSDYKYFAKVFKKYLHISPKKLKSL
CCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHCCCHHHHHHHHHHHHHHCCCHHHHHHH
GRIVK
HHHCC
>Mature Secondary Structure 
TLNEYILQYRLKQAIDKMAESPNSPLSAISDQVGFSDYKYFAKVFKKYLHISPKKLKSL
CHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHCCCHHHHHHHHHHHHHHCCCHHHHHHH
GRIVK
HHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA