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The map label for this gene is ydjE [C]

Identifier: 116496291

GI number: 116496291

Start: 2855547

End: 2856845

Strand: Direct

Name: ydjE [C]

Synonym: LSEI_2873

Alternate gene names: 116496291

Gene position: 2855547-2856845 (Clockwise)

Preceding gene: 116496287

Following gene: 116496293

Centisome position: 98.63

GC content: 47.65

Gene sequence:

>1299_bases
ATGCGAAAACCATCCGGGCGTCACCGCGGTACGAACAAAACCTTATCCTTTACAAGTGTCATTCTGCTTGGGATCAATGG
CATCATTGGATCCGGTATCTTTTTGTTGCCAGGCACACTTTATCAAGAAGCTGGCTTGGGTAGTGTCAGCGCGATTGTTT
TGGCTGGACTCAGTACAACGTTAATTGCACTGAGTTACGCTATGCTCGCCTCTAAAATAGACGATGATGGCGGTGCGTGG
GTCTATTCAAATCGCGCTTTTGGCGCTTTTATCGGCTTTCAAACAGGTTGGTTTGGATGGTTTCTGGGCGTGATTACCAT
TGCGGCTGAATTGGCCGCTTTTCTCACTGCATTGGGCGGATTAATACCCGTTGTCAAGCAACGAAGCGTCTATATTAGCG
TGGCCTTAGTGATCATTGCTGCTTTAAACGCCATTAATTTAGTCGGACCAAATATCCTCACGTTCATCGATAATATCTCC
AGTGCCTTGAAGATCATCATTCTCATCGCGGTGATTGCTGCCGGTGGCTATTTCATCAGTACACACGGCCTGCACGTAAG
CCAGCCGCAAGCAGTTTCATCAGATTTTCGCACAGCTTTCTCGACAGCATTCTATATGTTTACCGGCTTTTCATTCCTGC
CAGTTGCCGCGAACAAAATGAAAAATCCAGAAAAAACACTCCCACGCGCCCTCATGGTGGTCATGTTGATCGTTATTGCC
ATCTATGGCATGGCTCAAATGACGACGATCGTTATTCTCAGCACCAATCTGATGGCTGAAACCTTACCAGTCGCGGCAGC
GTTCGCCGCAGTTGTTGGTACCATCGGAAAAACGGTGGTGATATTAGGTATGCTCATCTCCATTCTGGGTGTTGCTGTCG
CCGTTTCTTTCGATACGCCAATCGAAATGGCTTCATTAGCAACCGAAAAAACTTTGCTACCAGCAGTATTCGGGCGAACC
AACAAAAGTGGTGCCCCATTTGTCGCTATCTGGTTGACAATCGGTATTGCCGCATTGCTAGTGGTATCTGGCAGCTACCT
ATTTTTAGTCAACCTGATCGTATTTAGTGCCTTTCTTCAATACATCACAACCATCCTAGCATGGTTCAAATTACGGCATG
ATCCAACCCTACCCGCTGGTATTCACCTACCAATGGCGCCACTTTTAATGGGATTTGCCTTATTGCTGATCGGCTATCTA
ATGACCAGTGCTACATGGCTGACTTGGCTGATTGCCGTGATCGTTGCATTGATCGGCAGCGTCATCTACGCCACCGACAC
CCGCAGACGAGGTGAATGA

Upstream 100 bases:

>100_bases
CACAGTGTACCGTTTAGTGCCAGAAATAAGAATTAATTAGCTCACCCGTTCCTTGCCTAACGACTAAAACACTCACTAAA
GCAATGAAGGAATGACTACG

Downstream 100 bases:

>100_bases
CGCAGCTTGCTGGTTTGTAAAAGTCACAAAAATAACCGGCTGAAAGCTCTGCCGGTTATTTTAACAACATGTTGTTATCG
TTACCGATTAATGGACCTCG

Product: amino acid transporter

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 432; Mature: 432

Protein sequence:

>432_residues
MRKPSGRHRGTNKTLSFTSVILLGINGIIGSGIFLLPGTLYQEAGLGSVSAIVLAGLSTTLIALSYAMLASKIDDDGGAW
VYSNRAFGAFIGFQTGWFGWFLGVITIAAELAAFLTALGGLIPVVKQRSVYISVALVIIAALNAINLVGPNILTFIDNIS
SALKIIILIAVIAAGGYFISTHGLHVSQPQAVSSDFRTAFSTAFYMFTGFSFLPVAANKMKNPEKTLPRALMVVMLIVIA
IYGMAQMTTIVILSTNLMAETLPVAAAFAAVVGTIGKTVVILGMLISILGVAVAVSFDTPIEMASLATEKTLLPAVFGRT
NKSGAPFVAIWLTIGIAALLVVSGSYLFLVNLIVFSAFLQYITTILAWFKLRHDPTLPAGIHLPMAPLLMGFALLLIGYL
MTSATWLTWLIAVIVALIGSVIYATDTRRRGE

Sequences:

>Translated_432_residues
MRKPSGRHRGTNKTLSFTSVILLGINGIIGSGIFLLPGTLYQEAGLGSVSAIVLAGLSTTLIALSYAMLASKIDDDGGAW
VYSNRAFGAFIGFQTGWFGWFLGVITIAAELAAFLTALGGLIPVVKQRSVYISVALVIIAALNAINLVGPNILTFIDNIS
SALKIIILIAVIAAGGYFISTHGLHVSQPQAVSSDFRTAFSTAFYMFTGFSFLPVAANKMKNPEKTLPRALMVVMLIVIA
IYGMAQMTTIVILSTNLMAETLPVAAAFAAVVGTIGKTVVILGMLISILGVAVAVSFDTPIEMASLATEKTLLPAVFGRT
NKSGAPFVAIWLTIGIAALLVVSGSYLFLVNLIVFSAFLQYITTILAWFKLRHDPTLPAGIHLPMAPLLMGFALLLIGYL
MTSATWLTWLIAVIVALIGSVIYATDTRRRGE
>Mature_432_residues
MRKPSGRHRGTNKTLSFTSVILLGINGIIGSGIFLLPGTLYQEAGLGSVSAIVLAGLSTTLIALSYAMLASKIDDDGGAW
VYSNRAFGAFIGFQTGWFGWFLGVITIAAELAAFLTALGGLIPVVKQRSVYISVALVIIAALNAINLVGPNILTFIDNIS
SALKIIILIAVIAAGGYFISTHGLHVSQPQAVSSDFRTAFSTAFYMFTGFSFLPVAANKMKNPEKTLPRALMVVMLIVIA
IYGMAQMTTIVILSTNLMAETLPVAAAFAAVVGTIGKTVVILGMLISILGVAVAVSFDTPIEMASLATEKTLLPAVFGRT
NKSGAPFVAIWLTIGIAALLVVSGSYLFLVNLIVFSAFLQYITTILAWFKLRHDPTLPAGIHLPMAPLLMGFALLLIGYL
MTSATWLTWLIAVIVALIGSVIYATDTRRRGE

Specific function: Probable amino-acid or metabolite transport protein [H]

COG id: COG0531

COG function: function code E; Amino acid transporters

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the amino acid-polyamine-organocation (APC) superfamily [H]

Homologues:

Organism=Homo sapiens, GI186910308, Length=302, Percent_Identity=27.1523178807947, Blast_Score=74, Evalue=4e-13,
Organism=Homo sapiens, GI186910306, Length=302, Percent_Identity=27.1523178807947, Blast_Score=74, Evalue=4e-13,
Organism=Homo sapiens, GI186910304, Length=302, Percent_Identity=27.1523178807947, Blast_Score=74, Evalue=4e-13,
Organism=Homo sapiens, GI181337167, Length=325, Percent_Identity=24.6153846153846, Blast_Score=69, Evalue=1e-11,
Organism=Homo sapiens, GI115648063, Length=284, Percent_Identity=28.169014084507, Blast_Score=67, Evalue=3e-11,
Organism=Homo sapiens, GI115648022, Length=284, Percent_Identity=28.169014084507, Blast_Score=67, Evalue=3e-11,
Organism=Homo sapiens, GI258614003, Length=409, Percent_Identity=20.7823960880196, Blast_Score=67, Evalue=3e-11,
Organism=Homo sapiens, GI258614005, Length=409, Percent_Identity=20.7823960880196, Blast_Score=67, Evalue=3e-11,
Organism=Homo sapiens, GI33286428, Length=396, Percent_Identity=24.7474747474747, Blast_Score=67, Evalue=4e-11,
Organism=Homo sapiens, GI187423910, Length=439, Percent_Identity=23.4624145785877, Blast_Score=67, Evalue=4e-11,
Organism=Homo sapiens, GI7657591, Length=439, Percent_Identity=23.4624145785877, Blast_Score=67, Evalue=4e-11,
Organism=Escherichia coli, GI2367353, Length=324, Percent_Identity=25.3086419753086, Blast_Score=80, Evalue=2e-16,
Organism=Escherichia coli, GI1786302, Length=399, Percent_Identity=25.31328320802, Blast_Score=72, Evalue=5e-14,
Organism=Escherichia coli, GI1786694, Length=438, Percent_Identity=24.2009132420091, Blast_Score=66, Evalue=4e-12,
Organism=Escherichia coli, GI1789017, Length=353, Percent_Identity=24.929178470255, Blast_Score=66, Evalue=5e-12,
Organism=Escherichia coli, GI1790653, Length=391, Percent_Identity=24.5524296675192, Blast_Score=62, Evalue=5e-11,
Organism=Caenorhabditis elegans, GI17540018, Length=412, Percent_Identity=27.1844660194175, Blast_Score=94, Evalue=2e-19,
Organism=Caenorhabditis elegans, GI32566699, Length=369, Percent_Identity=25.4742547425474, Blast_Score=78, Evalue=8e-15,
Organism=Caenorhabditis elegans, GI17531343, Length=361, Percent_Identity=22.1606648199446, Blast_Score=72, Evalue=8e-13,
Organism=Caenorhabditis elegans, GI71995388, Length=416, Percent_Identity=25.4807692307692, Blast_Score=69, Evalue=4e-12,
Organism=Caenorhabditis elegans, GI71995382, Length=416, Percent_Identity=25.4807692307692, Blast_Score=69, Evalue=4e-12,
Organism=Caenorhabditis elegans, GI71993915, Length=390, Percent_Identity=24.1025641025641, Blast_Score=67, Evalue=2e-11,
Organism=Caenorhabditis elegans, GI17532491, Length=341, Percent_Identity=23.4604105571848, Blast_Score=66, Evalue=4e-11,
Organism=Caenorhabditis elegans, GI71982612, Length=386, Percent_Identity=23.5751295336788, Blast_Score=65, Evalue=5e-11,
Organism=Caenorhabditis elegans, GI71982608, Length=386, Percent_Identity=23.5751295336788, Blast_Score=65, Evalue=6e-11,
Organism=Drosophila melanogaster, GI45550968, Length=374, Percent_Identity=25.9358288770053, Blast_Score=84, Evalue=2e-16,
Organism=Drosophila melanogaster, GI19921172, Length=374, Percent_Identity=25.9358288770053, Blast_Score=84, Evalue=2e-16,
Organism=Drosophila melanogaster, GI24667468, Length=337, Percent_Identity=26.4094955489614, Blast_Score=82, Evalue=6e-16,
Organism=Drosophila melanogaster, GI24666159, Length=404, Percent_Identity=22.5247524752475, Blast_Score=80, Evalue=3e-15,
Organism=Drosophila melanogaster, GI221512776, Length=404, Percent_Identity=22.5247524752475, Blast_Score=80, Evalue=3e-15,
Organism=Drosophila melanogaster, GI24641993, Length=405, Percent_Identity=25.1851851851852, Blast_Score=75, Evalue=8e-14,
Organism=Drosophila melanogaster, GI24641995, Length=405, Percent_Identity=25.4320987654321, Blast_Score=75, Evalue=1e-13,
Organism=Drosophila melanogaster, GI221331183, Length=289, Percent_Identity=25.9515570934256, Blast_Score=69, Evalue=6e-12,
Organism=Drosophila melanogaster, GI17647653, Length=289, Percent_Identity=25.9515570934256, Blast_Score=69, Evalue=6e-12,
Organism=Drosophila melanogaster, GI24664379, Length=289, Percent_Identity=25.9515570934256, Blast_Score=69, Evalue=6e-12,
Organism=Drosophila melanogaster, GI24668806, Length=405, Percent_Identity=19.2592592592593, Blast_Score=66, Evalue=4e-11,
Organism=Drosophila melanogaster, GI21356285, Length=405, Percent_Identity=19.2592592592593, Blast_Score=66, Evalue=4e-11,
Organism=Drosophila melanogaster, GI24668802, Length=405, Percent_Identity=19.2592592592593, Blast_Score=66, Evalue=4e-11,
Organism=Drosophila melanogaster, GI21357367, Length=386, Percent_Identity=24.6113989637306, Blast_Score=66, Evalue=5e-11,
Organism=Drosophila melanogaster, GI24651635, Length=381, Percent_Identity=23.8845144356955, Blast_Score=65, Evalue=9e-11,
Organism=Drosophila melanogaster, GI24651633, Length=381, Percent_Identity=23.8845144356955, Blast_Score=65, Evalue=9e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004841
- InterPro:   IPR002293 [H]

Pfam domain/function: PF00324 AA_permease [H]

EC number: NA

Molecular weight: Translated: 45769; Mature: 45769

Theoretical pI: Translated: 10.15; Mature: 10.15

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.2 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRKPSGRHRGTNKTLSFTSVILLGINGIIGSGIFLLPGTLYQEAGLGSVSAIVLAGLSTT
CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCHHHCCCHHHHHCCCCHHHHHHHHHHHHH
LIALSYAMLASKIDDDGGAWVYSNRAFGAFIGFQTGWFGWFLGVITIAAELAAFLTALGG
HHHHHHHHHHHHCCCCCCEEEECCCCHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
LIPVVKQRSVYISVALVIIAALNAINLVGPNILTFIDNISSALKIIILIAVIAAGGYFIS
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCEEEE
THGLHVSQPQAVSSDFRTAFSTAFYMFTGFSFLPVAANKMKNPEKTLPRALMVVMLIVIA
ECCCCCCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHH
IYGMAQMTTIVILSTNLMAETLPVAAAFAAVVGTIGKTVVILGMLISILGVAVAVSFDTP
HHHHHHHHHHHHEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
IEMASLATEKTLLPAVFGRTNKSGAPFVAIWLTIGIAALLVVSGSYLFLVNLIVFSAFLQ
HHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHH
YITTILAWFKLRHDPTLPAGIHLPMAPLLMGFALLLIGYLMTSATWLTWLIAVIVALIGS
HHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VIYATDTRRRGE
HHHHCCCCCCCC
>Mature Secondary Structure
MRKPSGRHRGTNKTLSFTSVILLGINGIIGSGIFLLPGTLYQEAGLGSVSAIVLAGLSTT
CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCHHHCCCHHHHHCCCCHHHHHHHHHHHHH
LIALSYAMLASKIDDDGGAWVYSNRAFGAFIGFQTGWFGWFLGVITIAAELAAFLTALGG
HHHHHHHHHHHHCCCCCCEEEECCCCHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
LIPVVKQRSVYISVALVIIAALNAINLVGPNILTFIDNISSALKIIILIAVIAAGGYFIS
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCEEEE
THGLHVSQPQAVSSDFRTAFSTAFYMFTGFSFLPVAANKMKNPEKTLPRALMVVMLIVIA
ECCCCCCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHH
IYGMAQMTTIVILSTNLMAETLPVAAAFAAVVGTIGKTVVILGMLISILGVAVAVSFDTP
HHHHHHHHHHHHEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
IEMASLATEKTLLPAVFGRTNKSGAPFVAIWLTIGIAALLVVSGSYLFLVNLIVFSAFLQ
HHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHH
YITTILAWFKLRHDPTLPAGIHLPMAPLLMGFALLLIGYLMTSATWLTWLIAVIVALIGS
HHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VIYATDTRRRGE
HHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9634230; 12218036 [H]