| Definition | Lactobacillus casei ATCC 334, complete genome. |
|---|---|
| Accession | NC_008526 |
| Length | 2,895,264 |
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The map label for this gene is 116496293
Identifier: 116496293
GI number: 116496293
Start: 2858957
End: 2859091
Strand: Direct
Name: 116496293
Synonym: LSEI_2876
Alternate gene names: NA
Gene position: 2858957-2859091 (Clockwise)
Preceding gene: 116496291
Following gene: 116496295
Centisome position: 98.75
GC content: 42.22
Gene sequence:
>135_bases ATGGCTAATCCACCAATGACCGGCGTCAACGAGTTAGAGATTGCATCAAGAATGCCATTCAGCAATCGTTTGAATGTGAT TTTTTCGCGCTTCTTATTAACTTTTTCAGTCGTTGCGTTAGCCTTCGATACCTAG
Upstream 100 bases:
>100_bases TGAATTACCCATCAAATAAAGTAACCGGTAAGTCTGACTTCCTTGGGTCACAAGATGACTCACAGTCAGCAAATTCAGCA GTGCGAGAAATAACCCCGCC
Downstream 100 bases:
>100_bases ATTGCAATAATAAAGTTACCACCTAGAAAGAGGCTTGCTCACTGCTTGAACTGGGGTTTGCCAACGGAGACATTTTCTAG GTTTGTTATTGATAAGCGCT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 44; Mature: 43
Protein sequence:
>44_residues MANPPMTGVNELEIASRMPFSNRLNVIFSRFLLTFSVVALAFDT
Sequences:
>Translated_44_residues MANPPMTGVNELEIASRMPFSNRLNVIFSRFLLTFSVVALAFDT >Mature_43_residues ANPPMTGVNELEIASRMPFSNRLNVIFSRFLLTFSVVALAFDT
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 4919; Mature: 4788
Theoretical pI: Translated: 6.62; Mature: 6.62
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 6.8 %Met (Translated Protein) 6.8 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 4.7 %Met (Mature Protein) 4.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MANPPMTGVNELEIASRMPFSNRLNVIFSRFLLTFSVVALAFDT CCCCCCCCCCHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure ANPPMTGVNELEIASRMPFSNRLNVIFSRFLLTFSVVALAFDT CCCCCCCCCHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA