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The map label for this gene is yycB [H]

Identifier: 116496245

GI number: 116496245

Start: 2806940

End: 2808133

Strand: Direct

Name: yycB [H]

Synonym: LSEI_2824

Alternate gene names: 116496245

Gene position: 2806940-2808133 (Clockwise)

Preceding gene: 116496244

Following gene: 116496246

Centisome position: 96.95

GC content: 50.5

Gene sequence:

>1194_bases
ATGAAAAAGAACCACACCTCGACAGCCTGGTTGACTTGGGGCATCATGCTGGTCGGTGCCAATCTGCGGCTGCCCATCAC
GATGATCCCACCGTTGCTGCCGACAATTAAGCAAACACTCGGCCTACCTGCATCCATGGCAGGTATGCTGACAACCATTC
CATTGCTCATGTTCGCGCTGGCCTCACCGTTAATCGCCAAAATGGGTAATCGTCGTGGTAATGAATGGAGCTTGCTGGTA
GCGCTGGTTATCTTGTTGGCTGGTAGCCTGCTGCGAATCATTCCCAGCTTGACAGCCTTAATTGCTGGTACTTTGCTCAT
CGGATTTGGTATCTCTGGCGGTAACGTTCTTTTACCGGCAATCATCAAGGACCAATTTCCCCACGCTATCGGTGCTAAAA
CCAGTCTTTATACCGTGACGATGGGACTTATTGCGTCCCTCGGTACTGGACTCTCAGGATTGCTAAATCAGCAATTCAAC
ATGCAGATCACGCTGGCAGCTTTTTCGTTAGTCGGCGTCTTTGGATTACTCGTCTGGGCGTTGGCCTTCCGCACACTACC
AAAGAAAGCAGCTCGGCAAGACGTCCAGCGCAAAAATATCGCCGTTTCGCGATCCATGCTAGCGTGGTGGATCGCTTTAT
TCTTCGGCCTGCAAAGTTTTCTCTACTATTCTTTGCTAACTTGGCTGCCAAGTCTTTGGCAAGCGGCCGGTTTCTCCCAA
ATCGCGGCGGGTAATCTGGCTACCATTTTTCAGCTGAGCGGGATGCCGGCAACATTATCCATCCCATTCATTGCTGAGAA
GCGCCATGGCCTCTTATATAGTGTCTGGGGCATCATGCTAGGCTTTGTACTAGGTGCTTTGGGTATTCTTATCCCTGGGG
CGAACTTTGGCTTAAACGTTGTCTACGCGCTGCTCATGGGCGTTGCTTCTGGGGCCGCTTTTGCCATCTGCATTGTCTTT
TTCCAGAAGAAAACCGCCGATGCTTATGAAACAGCTAGTCTCTCTGGCTTTGCTCAAAGTGTCGGCTACTTATTTGCGGC
GGTTGGTCCAGTATTATACGGCTTCATCCAAACGGCTACAGGTTCGTGGGATTTATTGTTGTGGCTGACAGTCGGGCTAA
CGCTGCTGATGTTTGTGGCAGGGCTGATCATCAATGCGAACCATCGGATTTTTCCATCAAAGGCGAATAGATAG

Upstream 100 bases:

>100_bases
GCATAACCTGAATGGCCGAGTTTTGACTATTTATGACTGGCATGCTTACATGTAGGTTGCTGCGACTGTGGGCGTATTCT
AATGACGGAGGAAAACAGCC

Downstream 100 bases:

>100_bases
CGCTTGCAAGTTTCTATTACTTTTTTTACACTAAGCATGAATGGCTAAGGAGGTCACAAAATGGCAATGACAACGACAAT
TGGTAAAAGTACGGTCACAA

Product: cyanate permease

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 397; Mature: 397

Protein sequence:

>397_residues
MKKNHTSTAWLTWGIMLVGANLRLPITMIPPLLPTIKQTLGLPASMAGMLTTIPLLMFALASPLIAKMGNRRGNEWSLLV
ALVILLAGSLLRIIPSLTALIAGTLLIGFGISGGNVLLPAIIKDQFPHAIGAKTSLYTVTMGLIASLGTGLSGLLNQQFN
MQITLAAFSLVGVFGLLVWALAFRTLPKKAARQDVQRKNIAVSRSMLAWWIALFFGLQSFLYYSLLTWLPSLWQAAGFSQ
IAAGNLATIFQLSGMPATLSIPFIAEKRHGLLYSVWGIMLGFVLGALGILIPGANFGLNVVYALLMGVASGAAFAICIVF
FQKKTADAYETASLSGFAQSVGYLFAAVGPVLYGFIQTATGSWDLLLWLTVGLTLLMFVAGLIINANHRIFPSKANR

Sequences:

>Translated_397_residues
MKKNHTSTAWLTWGIMLVGANLRLPITMIPPLLPTIKQTLGLPASMAGMLTTIPLLMFALASPLIAKMGNRRGNEWSLLV
ALVILLAGSLLRIIPSLTALIAGTLLIGFGISGGNVLLPAIIKDQFPHAIGAKTSLYTVTMGLIASLGTGLSGLLNQQFN
MQITLAAFSLVGVFGLLVWALAFRTLPKKAARQDVQRKNIAVSRSMLAWWIALFFGLQSFLYYSLLTWLPSLWQAAGFSQ
IAAGNLATIFQLSGMPATLSIPFIAEKRHGLLYSVWGIMLGFVLGALGILIPGANFGLNVVYALLMGVASGAAFAICIVF
FQKKTADAYETASLSGFAQSVGYLFAAVGPVLYGFIQTATGSWDLLLWLTVGLTLLMFVAGLIINANHRIFPSKANR
>Mature_397_residues
MKKNHTSTAWLTWGIMLVGANLRLPITMIPPLLPTIKQTLGLPASMAGMLTTIPLLMFALASPLIAKMGNRRGNEWSLLV
ALVILLAGSLLRIIPSLTALIAGTLLIGFGISGGNVLLPAIIKDQFPHAIGAKTSLYTVTMGLIASLGTGLSGLLNQQFN
MQITLAAFSLVGVFGLLVWALAFRTLPKKAARQDVQRKNIAVSRSMLAWWIALFFGLQSFLYYSLLTWLPSLWQAAGFSQ
IAAGNLATIFQLSGMPATLSIPFIAEKRHGLLYSVWGIMLGFVLGALGILIPGANFGLNVVYALLMGVASGAAFAICIVF
FQKKTADAYETASLSGFAQSVGYLFAAVGPVLYGFIQTATGSWDLLLWLTVGLTLLMFVAGLIINANHRIFPSKANR

Specific function: Unknown

COG id: COG2807

COG function: function code P; Cyanate permease

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the major facilitator superfamily. Cyanate porter (TC 2.A.1.17) family [H]

Homologues:

Organism=Escherichia coli, GI1788092, Length=378, Percent_Identity=35.978835978836, Blast_Score=180, Evalue=1e-46,
Organism=Escherichia coli, GI1786536, Length=359, Percent_Identity=26.4623955431755, Blast_Score=86, Evalue=5e-18,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004747
- InterPro:   IPR020846
- InterPro:   IPR011701
- InterPro:   IPR016196 [H]

Pfam domain/function: PF07690 MFS_1 [H]

EC number: NA

Molecular weight: Translated: 42460; Mature: 42460

Theoretical pI: Translated: 10.96; Mature: 10.96

Prosite motif: PS50850 MFS

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
3.5 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
3.5 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure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CCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCC
>Mature Secondary Structure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CCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 7584024; 9384377 [H]