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The map label for this gene is yebQ [H]

Identifier: 116496244

GI number: 116496244

Start: 2805241

End: 2806662

Strand: Direct

Name: yebQ [H]

Synonym: LSEI_2823

Alternate gene names: 116496244

Gene position: 2805241-2806662 (Clockwise)

Preceding gene: 116496243

Following gene: 116496245

Centisome position: 96.89

GC content: 50.56

Gene sequence:

>1422_bases
ATGCAACGTTCTGAAACGGCACCAAAACGTTGGTGGCTACTGGTCGCGCTGGGCTTTTTTGCCTTCATGACCAATCTCGA
CGGTTCAATTGTGAATATTGCCGTGCCAATTATGGCCAAGGATCTCAAAGTCCCCGCCAGTCAGATGGAATGGACCGTCT
CGCTGTATTTAATCGTTTTAAGTGCGCTGCTATTGCCCTTTGGTAAACTTGGCGACCGCATCGGTAAGCAGCGGATTTTT
AAATGGGGCACCGGTACATTTGTCTTAGGTTCCTTGATGGCTGGGATTAATCTCGGCTTTAATTTTTTGATGTTAGCCCG
GATGATCCAGGCACTTGGCGGGGCGATGACTTTGGCGAATACGTACGGGATCGTCACCTCGACTTTCGCACTTGCTGAAC
GTGGCCGAACAATGGGGGTTGTGAGTACCTTCGTCGCATTGGGTGGTGTCGCTGGTCCAAGTCTAGGCGGTTTGATTTTG
GCCCATTTCAGTTGGCCAATGATTTTTCTCATCAACGTTCCTATCGGCTTAATCGCATTGGGTGTCTCCTTGTGGTCTAT
GAACAATGGCATCCCACAACGCGGTACGTACGATGGTTGGGGGATGATTTTGCAGGCAACAGCGATTGCAAGCGGTTTTT
GGGGACTGAATCTTGCTCAGCAAAGCGGTTTTGACGATCCAGTTGTCCTCAGCACCCTTGCATTGGCAGTCGTTGCTCTC
ATCGCCTTTATCGTCTTTGAGCAACGGCAACAAGCACCATTGCTTCCTTTGCGTATTTTCCGTGTCCGTATTTTCACACT
CGGTGTGGTCACTGTCTTCTTCATCTTTATGGTGCAGTTTTTCAGCACAGTGCTGATGCCGTTCTACCTTGAAGATGCTC
GTGGCCTGACACCAGGTACGGCTGGCACGCTATTATCGCTTTATCCACTGATGATGGTCTTCTTCGCCCCGTTTGGCGGT
TGGCTGGCCGATAAATGGAACGTCCCAGCAGTTGCTTTGCTCGGCAGCATTTTTATCGCTGTCGGCAGTCTTATCGGTGC
CACGTTGAAATTAAACGCACCGTTGACCATTTACATCATCAGTACACTCCTTGTCGGCATCGGCAGCGGTCTTTTTCAAT
CTCCAATTGGCGATGTGGTCATGTCAGTTGTTCCGAAAAATCAGCTTGGCATCGCTGGCAGTTTCAATGCGCTCGCACGC
AATCTTGGGATGGTCAGCGGCACGGCGGTTGCGACAACAGTGCTCTTTGGCACGATGAGTCAACTTGCTGGCAGCCGCGT
AACGAACTATCCAACAGCACATCCCGAATTCTTTATCAGCGGTTTACAAGTTGCCATGATTGTCGCTGCTGTACTCGCTA
TCCTCGGAGCCATCGCCATCGGCCTGACAATCAAACCGTGGCAGGCACACGAAAAAAACTAG

Upstream 100 bases:

>100_bases
GCGGCCTCTGGCGTGATGGCCGGTCTTTGGCCATTGCGACTGAGGTCCTTACACGCAGGTGACTGCTCTGGCAAACGCGT
TATGGTTAGGGGGATTCAAC

Downstream 100 bases:

>100_bases
TGTCAGTTTTCATGACAGTTCATCCGTCAGAACACCTCATCTTCCAATGAAAGCAGACGATTGTTTCGCCGGTAAATCAA
CGTTCGTGTAACAAGCCCAC

Product: major facilitator superfamily permease

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 473; Mature: 473

Protein sequence:

>473_residues
MQRSETAPKRWWLLVALGFFAFMTNLDGSIVNIAVPIMAKDLKVPASQMEWTVSLYLIVLSALLLPFGKLGDRIGKQRIF
KWGTGTFVLGSLMAGINLGFNFLMLARMIQALGGAMTLANTYGIVTSTFALAERGRTMGVVSTFVALGGVAGPSLGGLIL
AHFSWPMIFLINVPIGLIALGVSLWSMNNGIPQRGTYDGWGMILQATAIASGFWGLNLAQQSGFDDPVVLSTLALAVVAL
IAFIVFEQRQQAPLLPLRIFRVRIFTLGVVTVFFIFMVQFFSTVLMPFYLEDARGLTPGTAGTLLSLYPLMMVFFAPFGG
WLADKWNVPAVALLGSIFIAVGSLIGATLKLNAPLTIYIISTLLVGIGSGLFQSPIGDVVMSVVPKNQLGIAGSFNALAR
NLGMVSGTAVATTVLFGTMSQLAGSRVTNYPTAHPEFFISGLQVAMIVAAVLAILGAIAIGLTIKPWQAHEKN

Sequences:

>Translated_473_residues
MQRSETAPKRWWLLVALGFFAFMTNLDGSIVNIAVPIMAKDLKVPASQMEWTVSLYLIVLSALLLPFGKLGDRIGKQRIF
KWGTGTFVLGSLMAGINLGFNFLMLARMIQALGGAMTLANTYGIVTSTFALAERGRTMGVVSTFVALGGVAGPSLGGLIL
AHFSWPMIFLINVPIGLIALGVSLWSMNNGIPQRGTYDGWGMILQATAIASGFWGLNLAQQSGFDDPVVLSTLALAVVAL
IAFIVFEQRQQAPLLPLRIFRVRIFTLGVVTVFFIFMVQFFSTVLMPFYLEDARGLTPGTAGTLLSLYPLMMVFFAPFGG
WLADKWNVPAVALLGSIFIAVGSLIGATLKLNAPLTIYIISTLLVGIGSGLFQSPIGDVVMSVVPKNQLGIAGSFNALAR
NLGMVSGTAVATTVLFGTMSQLAGSRVTNYPTAHPEFFISGLQVAMIVAAVLAILGAIAIGLTIKPWQAHEKN
>Mature_473_residues
MQRSETAPKRWWLLVALGFFAFMTNLDGSIVNIAVPIMAKDLKVPASQMEWTVSLYLIVLSALLLPFGKLGDRIGKQRIF
KWGTGTFVLGSLMAGINLGFNFLMLARMIQALGGAMTLANTYGIVTSTFALAERGRTMGVVSTFVALGGVAGPSLGGLIL
AHFSWPMIFLINVPIGLIALGVSLWSMNNGIPQRGTYDGWGMILQATAIASGFWGLNLAQQSGFDDPVVLSTLALAVVAL
IAFIVFEQRQQAPLLPLRIFRVRIFTLGVVTVFFIFMVQFFSTVLMPFYLEDARGLTPGTAGTLLSLYPLMMVFFAPFGG
WLADKWNVPAVALLGSIFIAVGSLIGATLKLNAPLTIYIISTLLVGIGSGLFQSPIGDVVMSVVPKNQLGIAGSFNALAR
NLGMVSGTAVATTVLFGTMSQLAGSRVTNYPTAHPEFFISGLQVAMIVAAVLAILGAIAIGLTIKPWQAHEKN

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the major facilitator superfamily. TCR/tet family [H]

Homologues:

Organism=Escherichia coli, GI87081983, Length=415, Percent_Identity=32.289156626506, Blast_Score=184, Evalue=9e-48,
Organism=Escherichia coli, GI1789042, Length=405, Percent_Identity=26.6666666666667, Blast_Score=127, Evalue=1e-30,
Organism=Escherichia coli, GI1788710, Length=429, Percent_Identity=25.6410256410256, Blast_Score=117, Evalue=2e-27,
Organism=Escherichia coli, GI1790195, Length=290, Percent_Identity=28.9655172413793, Blast_Score=103, Evalue=2e-23,
Organism=Escherichia coli, GI1788392, Length=301, Percent_Identity=32.890365448505, Blast_Score=100, Evalue=2e-22,
Organism=Escherichia coli, GI1790146, Length=160, Percent_Identity=24.375, Blast_Score=62, Evalue=8e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR020846
- InterPro:   IPR011701
- InterPro:   IPR016196
- InterPro:   IPR001411 [H]

Pfam domain/function: PF07690 MFS_1 [H]

EC number: NA

Molecular weight: Translated: 50476; Mature: 50476

Theoretical pI: Translated: 10.52; Mature: 10.52

Prosite motif: PS50850 MFS

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
4.2 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
4.2 %Met     (Mature Protein)
4.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQRSETAPKRWWLLVALGFFAFMTNLDGSIVNIAVPIMAKDLKVPASQMEWTVSLYLIVL
CCCCCCCHHHHHHHHHHHHHHHHHCCCCCEEEEEHHHHHHCCCCCHHHHHHHHHHHHHHH
SALLLPFGKLGDRIGKQRIFKWGTGTFVLGSLMAGINLGFNFLMLARMIQALGGAMTLAN
HHHHHCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCHHHHHH
TYGIVTSTFALAERGRTMGVVSTFVALGGVAGPSLGGLILAHFSWPMIFLINVPIGLIAL
HHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCCHHHHHHHHHCCCCCEEHHCCHHHHHH
GVSLWSMNNGIPQRGTYDGWGMILQATAIASGFWGLNLAQQSGFDDPVVLSTLALAVVAL
HHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCHHHHCCCCCHHHHHHHHHHHHHH
IAFIVFEQRQQAPLLPLRIFRVRIFTLGVVTVFFIFMVQFFSTVLMPFYLEDARGLTPGT
HHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC
AGTLLSLYPLMMVFFAPFGGWLADKWNVPAVALLGSIFIAVGSLIGATLKLNAPLTIYII
HHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCEEEECCCCHHHHH
STLLVGIGSGLFQSPIGDVVMSVVPKNQLGIAGSFNALARNLGMVSGTAVATTVLFGTMS
HHHHHHHCCHHHHCHHHHHHHHHCCCCCCCCCCCHHHHHHHCCCCCCHHHHHHHHHHHHH
QLAGSRVTNYPTAHPEFFISGLQVAMIVAAVLAILGAIAIGLTIKPWQAHEKN
HHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCEECCCCCCCCC
>Mature Secondary Structure
MQRSETAPKRWWLLVALGFFAFMTNLDGSIVNIAVPIMAKDLKVPASQMEWTVSLYLIVL
CCCCCCCHHHHHHHHHHHHHHHHHCCCCCEEEEEHHHHHHCCCCCHHHHHHHHHHHHHHH
SALLLPFGKLGDRIGKQRIFKWGTGTFVLGSLMAGINLGFNFLMLARMIQALGGAMTLAN
HHHHHCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCHHHHHH
TYGIVTSTFALAERGRTMGVVSTFVALGGVAGPSLGGLILAHFSWPMIFLINVPIGLIAL
HHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCCHHHHHHHHHCCCCCEEHHCCHHHHHH
GVSLWSMNNGIPQRGTYDGWGMILQATAIASGFWGLNLAQQSGFDDPVVLSTLALAVVAL
HHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCHHHHCCCCCHHHHHHHHHHHHHH
IAFIVFEQRQQAPLLPLRIFRVRIFTLGVVTVFFIFMVQFFSTVLMPFYLEDARGLTPGT
HHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC
AGTLLSLYPLMMVFFAPFGGWLADKWNVPAVALLGSIFIAVGSLIGATLKLNAPLTIYII
HHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCEEEECCCCHHHHH
STLLVGIGSGLFQSPIGDVVMSVVPKNQLGIAGSFNALARNLGMVSGTAVATTVLFGTMS
HHHHHHHCCHHHHCHHHHHHHHHCCCCCCCCCCCHHHHHHHCCCCCCHHHHHHHHHHHHH
QLAGSRVTNYPTAHPEFFISGLQVAMIVAAVLAILGAIAIGLTIKPWQAHEKN
HHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCEECCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9097040; 9278503 [H]