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The map label for this gene is 116496172

Identifier: 116496172

GI number: 116496172

Start: 2731932

End: 2732966

Strand: Direct

Name: 116496172

Synonym: LSEI_2750

Alternate gene names: NA

Gene position: 2731932-2732966 (Clockwise)

Preceding gene: 116496171

Following gene: 116496174

Centisome position: 94.36

GC content: 47.63

Gene sequence:

>1035_bases
ATGAATGACAATGTAGCATGGTTTAAACAAGCGAAGTACGGCATGATGATCCATTGGGGCCTCTATTCACTGCTAGCTGG
TGAATATCGTGGCGAATCTTCCAGCGCTTATGCAGAATGGATTCAGTCAAAATTTCAGATTCCTAATGCTGATTATGGCA
ACTTGGCAACCGCCTTCAATCCGGTGTACTTCGATGCCAGAAAAATCGTCGCACTCGCTAAGCAATGCGGCATGCAGTAT
CTGGTGGTAACAACTAAACACCACGATGGCTTTGCCATGTATCACTCCAAGGTTGATGCTTATAACGTTTATGACGCCAC
GCCATTTCACCGTGATATCATCGGTGAGCTGGCAGAAGCCTGTCAAAAAGCCGGGCTCAAGTTTGGCCTGTATTACTCAC
AAGACCTCGACTGGCACGATCCGAACGGCGGCGGCTACAAGTCGAACGATGTCGAAACCGCTGGCACGACTTGGGATAAT
AGTTGGGACTTCCCTGACGAAGATCAGAAAGACTTCGATCTTTGTTTCGAAAATAAGATCCTGCCGCAAATCAAGGAAAT
CATGTCAAATTACGGTGACATTGCAACAGCGTGGTTTGACGTGCCGATGACCTTGTCTGAAGCGCAAAGTCAGACGATTT
ACGACACCGTCCGCGAGTTGCAACCAAACTGTTTAATCAATTCACGTCTAGGCAATGGCAAATACGACTTCGTTTCCCTA
GGCGACAACGAGATCCCGAAAAACAAAGAAGACATGAACAAGACCGACGTTGACTACAACGAAATTACTGGCTTCAAGCC
TTCGCCACTAGGTCTCTACGAAACTGCCGGCACCATTAATGATTCTTGGGGCTTCTCGTACCACGACCAGAATTGGAAAA
CACCACGTACCCTTTATCGCTATAAGCAACACCTCAACGATTTTGGCATCAATTATCTGCTGAACGTTGGTCTCGATCCA
CTGGGTCGTGTACCAATGATGGCAGAGGAGAATCTGCTGGCGGCTAAGGCTTTGGAAGATGACGCTAACCGGTAG

Upstream 100 bases:

>100_bases
AAACCTGCGAGCACTTTTAATAGAGCGTGACCCATCATAACGCGCTCCCCGGCGCAGCAACCGCGCTGGCTCGCGTTCAC
TTTTCAAAGGAGAAGAATTC

Downstream 100 bases:

>100_bases
AAAATAAAAAAGACTGATTCAGCGGAATGGCTAACCTGAATCAGTCTTTTTTGCATACTATAGTCTATTATTGTATTTTC
TTAACCAAAAACTGATCCAT

Product: Alpha-L-fucosidase

Products: NA

Alternate protein names: Glycoside Hydrolase Family; Glycosyl Hydrolase; Coagulation Factor 5/8 Type Domain Protein; Exported Alpha-L-Fucosidase Protein; Alpha-L-Fucosidase Protein; Calx-Beta Domain-Containing Protein; Exporte Hydrolase; Glycoside Hydrolase Family Alpha-L-Fucosidase; Family; Ig Domain-Containing; Alpha-L-Fucosidase Superfamily; Fucosidase; Alpha-1 3/4-Fucosidase; Glycosyl Hydrolase Alpha-L-Fucosidase; Exported Hydrolase; Exported Fucosidase; Alpha-L-Fucosidase Family Protein; Glycoside Hydrolase; Lipoprotein

Number of amino acids: Translated: 344; Mature: 344

Protein sequence:

>344_residues
MNDNVAWFKQAKYGMMIHWGLYSLLAGEYRGESSSAYAEWIQSKFQIPNADYGNLATAFNPVYFDARKIVALAKQCGMQY
LVVTTKHHDGFAMYHSKVDAYNVYDATPFHRDIIGELAEACQKAGLKFGLYYSQDLDWHDPNGGGYKSNDVETAGTTWDN
SWDFPDEDQKDFDLCFENKILPQIKEIMSNYGDIATAWFDVPMTLSEAQSQTIYDTVRELQPNCLINSRLGNGKYDFVSL
GDNEIPKNKEDMNKTDVDYNEITGFKPSPLGLYETAGTINDSWGFSYHDQNWKTPRTLYRYKQHLNDFGINYLLNVGLDP
LGRVPMMAEENLLAAKALEDDANR

Sequences:

>Translated_344_residues
MNDNVAWFKQAKYGMMIHWGLYSLLAGEYRGESSSAYAEWIQSKFQIPNADYGNLATAFNPVYFDARKIVALAKQCGMQY
LVVTTKHHDGFAMYHSKVDAYNVYDATPFHRDIIGELAEACQKAGLKFGLYYSQDLDWHDPNGGGYKSNDVETAGTTWDN
SWDFPDEDQKDFDLCFENKILPQIKEIMSNYGDIATAWFDVPMTLSEAQSQTIYDTVRELQPNCLINSRLGNGKYDFVSL
GDNEIPKNKEDMNKTDVDYNEITGFKPSPLGLYETAGTINDSWGFSYHDQNWKTPRTLYRYKQHLNDFGINYLLNVGLDP
LGRVPMMAEENLLAAKALEDDANR
>Mature_344_residues
MNDNVAWFKQAKYGMMIHWGLYSLLAGEYRGESSSAYAEWIQSKFQIPNADYGNLATAFNPVYFDARKIVALAKQCGMQY
LVVTTKHHDGFAMYHSKVDAYNVYDATPFHRDIIGELAEACQKAGLKFGLYYSQDLDWHDPNGGGYKSNDVETAGTTWDN
SWDFPDEDQKDFDLCFENKILPQIKEIMSNYGDIATAWFDVPMTLSEAQSQTIYDTVRELQPNCLINSRLGNGKYDFVSL
GDNEIPKNKEDMNKTDVDYNEITGFKPSPLGLYETAGTINDSWGFSYHDQNWKTPRTLYRYKQHLNDFGINYLLNVGLDP
LGRVPMMAEENLLAAKALEDDANR

Specific function: Unknown

COG id: COG3669

COG function: function code G; Alpha-L-fucosidase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Homo sapiens, GI119360348, Length=164, Percent_Identity=32.9268292682927, Blast_Score=93, Evalue=3e-19,
Organism=Homo sapiens, GI40068512, Length=145, Percent_Identity=33.7931034482759, Blast_Score=82, Evalue=8e-16,
Organism=Caenorhabditis elegans, GI71997700, Length=146, Percent_Identity=35.6164383561644, Blast_Score=90, Evalue=2e-18,
Organism=Drosophila melanogaster, GI24662717, Length=144, Percent_Identity=35.4166666666667, Blast_Score=85, Evalue=7e-17,
Organism=Drosophila melanogaster, GI78706642, Length=144, Percent_Identity=35.4166666666667, Blast_Score=85, Evalue=7e-17,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 39220; Mature: 39220

Theoretical pI: Translated: 4.52; Mature: 4.52

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
4.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNDNVAWFKQAKYGMMIHWGLYSLLAGEYRGESSSAYAEWIQSKFQIPNADYGNLATAFN
CCCCCCHHHHCCCCEEEHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCCCCCCHHHHCC
PVYFDARKIVALAKQCGMQYLVVTTKHHDGFAMYHSKVDAYNVYDATPFHRDIIGELAEA
CHHHHHHHHHHHHHHCCCEEEEEEEECCCCEEEECCCCCCEECCCCCCHHHHHHHHHHHH
CQKAGLKFGLYYSQDLDWHDPNGGGYKSNDVETAGTTWDNSWDFPDEDQKDFDLCFENKI
HHHCCCEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHCCCH
LPQIKEIMSNYGDIATAWFDVPMTLSEAQSQTIYDTVRELQPNCLINSRLGNGKYDFVSL
HHHHHHHHHCCCCCEEEHHCCCCCHHHHHHHHHHHHHHHCCCCEEEECCCCCCCEEEEEC
GDNEIPKNKEDMNKTDVDYNEITGFKPSPLGLYETAGTINDSWGFSYHDQNWKTPRTLYR
CCCCCCCCHHHCCCCCCCHHHCCCCCCCCCCHHHCCCCCCCCCCCCCCCCCCCCHHHHHH
YKQHLNDFGINYLLNVGLDPLGRVPMMAEENLLAAKALEDDANR
HHHHHHHHCCHHHEECCCCCCCCCCCHHCCCHHHHHHHHCCCCC
>Mature Secondary Structure
MNDNVAWFKQAKYGMMIHWGLYSLLAGEYRGESSSAYAEWIQSKFQIPNADYGNLATAFN
CCCCCCHHHHCCCCEEEHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCCCCCCHHHHCC
PVYFDARKIVALAKQCGMQYLVVTTKHHDGFAMYHSKVDAYNVYDATPFHRDIIGELAEA
CHHHHHHHHHHHHHHCCCEEEEEEEECCCCEEEECCCCCCEECCCCCCHHHHHHHHHHHH
CQKAGLKFGLYYSQDLDWHDPNGGGYKSNDVETAGTTWDNSWDFPDEDQKDFDLCFENKI
HHHCCCEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHCCCH
LPQIKEIMSNYGDIATAWFDVPMTLSEAQSQTIYDTVRELQPNCLINSRLGNGKYDFVSL
HHHHHHHHHCCCCCEEEHHCCCCCHHHHHHHHHHHHHHHCCCCEEEECCCCCCCEEEEEC
GDNEIPKNKEDMNKTDVDYNEITGFKPSPLGLYETAGTINDSWGFSYHDQNWKTPRTLYR
CCCCCCCCHHHCCCCCCCHHHCCCCCCCCCCHHHCCCCCCCCCCCCCCCCCCCCHHHHHH
YKQHLNDFGINYLLNVGLDPLGRVPMMAEENLLAAKALEDDANR
HHHHHHHHCCHHHEECCCCCCCCCCCHHCCCHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA